Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <---------ZAT2                    ======================HOX2a_HOX2a                    ------>ZmHOX2a(2)                   <------ZmHOX2a(2)                                      ------>ZmHOX2a(2)                   =======================HOX2a_HOX2a          ------>ZmHOX2a(1)        <---------ANAC46                   --------->CCA1(2)                --------->ZAT2    --------->ICU4    <---------ANAC58                  --------->AGP1                    <---------ZAT2    <---------YAB1    <---------ANAC58                  <---------ARR11(3)                <---------At4g35610 --------->ARR11(3)                  --------->ARR11(3)   <---------GLK1(2)       ==================HOX2a_HOX2a                  <---------AGP1   <---------At4g35610    <---------GLK1(1) ----------->HVH21      <-                 <---------CCA1(2) ------>ZmHOX2a(1)--------->At4g35610 <---------ARR11(3)       <---   aagagtaaccagaatacttagatctaagctcgttctcctctgattcttctcgcgagctggatgtccttgggcatgatcgtgaccctcttggcgtgaatgg  2971800                                                                          <---------HSFB2a(2)                                                                 <---------ZAT14                                                                 <------NtERF2                                                                ------>NtERF2                                                               <---------bZIP60(1)                                                               --------->bZIP60(2)                                                               --------->ATERF1(2)                                                               <---------ATERF1(2)                                                               --------->O2                                                               <---------DEAR3(1)                                                             ------>NtERF2--------->HSFB2a(2)                                                             <---------ATERF1(1)                                                            ----------->HVH21                                                           <------NtERF2 <---------LBD16                                                           --------->ATERF1(1)                                                     ---------->DOF2  --------->ZAT14                                                  ------>ZmHOX2a(1)   <---------ZAT14                                                  --------->LBD16--------->ZAT18                                            --------->HSFC1(2)--------->ATERF1(1)                                            <---------HSFC1(2)<------NtERF2                                            <---------At4g35610--------->ANAC46                                            --------->ZAT2 --------->RAP2.3(1)                                            --------->At4g35610--------->bZIP60(1)     ------>ZmHOX2a(2)                                            --------->HSFB2a(1)--------->ANAC58        ==============                                   <---------At4g35610    <---------ATERF1(1)         ===============                                   --------->At4g35610   <---------DEAR3(1)           <------ZmHOX2a(2)       <------MYB83             <--------P  <---------HSFB2a(1)--------->ANAC58      --------->ARR14(2)       <------MYB46(1)  ----------->HVH21--------->At4g35610--------->DEAR3(1)       <---------ARR11(3) -----NtERF2       --------->HSFB2a(1) <-----------RAV1(2)<---------RAP2.3(1)        --------->ARR11(3) ------ANAC46 <---------------------WRI1 <---------At4g35610<---------DEAR3(1)       <---------ARR14(2)   cgcagagattggtgtcttcgaagagtccgacgaggtaagcttcagcagcttcctgaagagcggcgacggcactgctctggaaacgaagatcggttttgaa  2971900                                                                                                   --                                                                                                  <--                                                                                                  <--                                                                                                  <--                                        <---------ANAC46                                          <--                         <---------HSFB2a(2)                                              --------->MYB52(1)              ----------->HVH21         <---------TOE2(3)         <---------MYB52(1)      -----------         ------>ZmHOX2a(2)            --------->MYB52(1)        <---------HSFB2a(2)    --------->ANAC46        <------ZmHOX2a(2)--------->HSFB2a(2)                    --------->HSFB2a(2)    --------->ANAC58 ===============HOX2a_HOX2a   --------->DAG2               <----------DOF2             --------->ANAC58 ------>ZmHOX2a(1)      <---------LBD16<---------LBD16   <---------ZAT14             ---------->DOF2 ==============HOX2a_HOX2a  ---------->DOF2       --------->At4g35610        --------->GLK1(1)   <--- =======HOX2a_HOX2a--------->ANAC58  <---------ZAT14     <---------ZAT18     <---------GLK1(1) ------ =======HOX2a_HOX2a--------->ANAC58  <---------ARR14(2)  --------->ZAT14  ------>ZmHOX2a(1)    <-----   gtcctgagcgatctctctgacaagcctctggaaagggagtttacggataagaagctcagtgctcttctggtacttcctgatttctcttaaagcaacagtt  2972000                                               --------->GLK1(1)                                              <-----------ARR10                                              <---------ARR14(2)      --------->ZAT2                                          <---------At4g35610         --------->At4g35610                                        <------NtERF2                 <---------ZAT2       ------->TEIL                    --------->LBD16              <-----------RAV1(2)       <---------ARR14(2)              <------NtERF2               --------->ATERF1(1)       --------->ARR14(2)             <---------DEAR3(1)           <------NtERF2       --------->GLK1(2)             <---------LBD16              ------>NtERF2 <---------ARR14(2)                 <------NtERF2             <-----------RAV1(1) --------->ARR14(2)                ------>NtERF2           <----------DOF2    <---------ANAC58 ------->LBD16                     <---------MYB46(3)    ------>NtERF2<---------At4g35610 -------ANAC58                <---------LBD16 <---------GLK1(2)  <---------ETT(2) -------ANAC58           --------->ANAC46 --------->At4g35610 ==================RAV              <--- -------ANAC55(1)     --------->ZAT14<---------ANAC46   --------->DEAR3(1)    <---------ANAC46  <---- -------ANAC46   <---------ANAC58 --------->ALFIN1   <---------DEAR3(1)  --------->At4g35610    <---- >RAV1(1)   --------->ALFIN1 ------>ZmHOX2a(1)--------->ARR14(2) --------->ETT(2)            <------- ------LBD16<-----------RAV1(1) --------->LBD16<---------GLK1(1)---------->ID1<---------ANAC58 ------ --->ARR14(2)    <---------ANAC46 ----------->HVH21  --------->ANAC46<---------ATERF1(1)    ------>ZmHOX2a(1) ----ARR14(2)    <---------ANAC58<---------MYB52(1) ------>ZmHOX2a(1)------>NtERF2    <---------DAG2   ccgggtctgaatctgtgtggcttcttcactcctccggtggccggagcagatttcctcgccgcttttgtcgccagctgcttccttggagcctttcctccgg  2972100                                                                                            =========                                                                                            ------>ZmHOX2a(2)                                                                                           <------ZmHOX2a(2)                         --------->ANAC46                                                  ==========                         --------->ANAC58                                                  --------->CCA1(2)                      --------->SPL7                                                      --------->ARR11(3)      ------>ZmHOX2a(1)  --------->ANAC58                                                 --------->ARR14(2) --------->GLK1(1)  <---------SPL7                                                        <---------ARR14(2) <---------GLK1(1) <------MYB83                                                           --------->AGP1 -----P            <------MYB46(1)                              <---------AHL20(2)        <---------AGP1 -----MYB52(1)  <---------AtLEC2                               --------->AHL20(2)         <---------ARR11(3) ---GAMYB      <---------ZAT2                      --------->GLK1(2)                     <---------GLK1(1) --LBD16    <---------MYB52(1)          ----------->GT1        <---------AHL20(2)       ----------->ARR10 --->LBD16 <---------RAP2.6(3)   ----------->GT1<---------TOE2(3)                ---------->DOF2   ttgatttcctagccgtctgcttggtacgagccatgaagtaaaatgttattaagaaactgtttgattttaatttgaagatgagagaaagttgagatctgga  2972200                                                                                                    -                                                                                              ------>ZmHOX2a(2)                       <---------RVE1(1)                                                     --------                       <---------CCA1(1)                                                     <------ZmHOX2a(2)                      <---------ARR14(2)                                                    <--------                      --------->ARR14(2)                                                    <--------                      <---------ARR11(3)                                                    ---------                    ----------->GT1                          --------->AHL20(1)             ---------               <------ZmHOX2a(1)                             <---------AHL20(1)   <---------At4g35610             <---------TOE2(3)     ----------->GT1           --------->ARR11(3)   --------->At4g35610         <------------CBF  <-----------GT1                   <---------ARR11(3)   <---------LBD16 --- *TSS  <---------YAB1 --------->ARR11(3)          --------->ALFIN1    <---------DAG2        <-------- =====================HOX2a_HOX2a --------->HSFB2a(2)   ----------->GT1    <----------DOF2  --------- =====================HOX2a_HOX2a <---------HSFB2a(2)  ----------->GT1<----------DOF2     -----------   tagtttgtttcgattgaggaaggggatatttatcgtctggaaattacaagaagtgggagggaaaatatttcgcttttctttttcagcgggattagatctg  2972300    --------->ATHB12 ----->ZmHOX2a(2) ->CCA1(2) -AGP1                                             --------->LBD16 -ARR14(2)                                        <---------ANAC46 >AGP1                                           --------->LBD16 >ARR14(2)               --------->CCA1(2)     ------>ZmHOX2a(2)   --------->TOE2(3) ------>ARR14(2)        <---------ARR14(2)    <------ZmHOX2a(2)    ------->GAMYB -ARR11(3)              --------->ARR14(2)   --------->ARR14(2)   <------------AtMYB77 >ARR11(3)         --------->MYB52(1)        <---------ARR14(2)  -------->P  <-----------GT1   ------ >ARR10       <---------AHL20(2)         --------->YAB1        --------->MYB46(3)     <---------LBD16   gatcgttcattggtttttaatcaacggatataagaggtttctatcacgatccgcgtgaaatcacagcaaccgtagattaatacaattctacggacagatt  2972400                                                                          <----------DOF2                                                                        <---------YAB1                                                                       --------->ARR11(3)                              <-------TEIL                             <-----------GT1                            <---------SPL7                             <---------ARR11(3)          ==                            --------->TOE1(2)                     --------->AHL20(2)               --                          <---------TOE1(3)                       <---------AHL20(1)               <-                       ----------->HVH21                          --------->AHL20(1)              ---                     <---------ANAC46                             <---------ARR11(3)              <--                    --------->LBD16                               <---------AHL20(2)              <--                  <---------LBD16                           --------->TOE2(3)                     <--                <---------ARR14(2)               ---------->DOF2 --------->AHL20(2)      --------->ANAC58           --------->ZAT6 <---------------AtSPL8--------->AHL20(2)--------->ARR11(3)     ------>MYB46(1)   <----------DOF2------>ZmHOX2a(2)       --------->YAB1  --------->GLK1(2)              ------>MYB83 --->GLK1(1)    --------->ARR14(2)  ------------------------>ANAC81  <---------AHL20(2)  --------->ANAC58   tcattcttttctaacactgatccgcgtgaaggtacgaagaccaatagaaataaaagaaataatctaaatatattatctttaccaaaaaaccaagcccatt  2972500                                             --------->At4g35610            <---------ANAC46                 <---------At4g35610        <---------ANAC58  <---------------AGL15        <---------ANAC58  <----------DOF2  --------->YAB1 =========================================MADS_MADS ------------->AGL15      --------------->AGL15 --------------AGL15     <-----------------AGL2<----------DOF2                              --------- ------>ANAC55(2)        <-----------------AGL3<---------DAG2                            <---------MYB52(1) ---------------AGL2    ---------->ID1    <---------ATHB12                         --------->ZAT18 -- ---------------AGL1   <-----------GT1  --------->WOX13(1)                  <---------YAB1  <-------- -------ANAC55(2)  <------------------------ANAC81             <-----------GT1    <------ZmHOX2a(1)<-   acttaatagggcctgcgtaattgtttttctttttttggttctcaatcagctttttctgggcttaaataccatctcaatatgctaggacgctgttttgtat  2972600                                         <---------AHL20(1)                                         <---------AHL20(2)                                         --------->AHL20(1)                                         --------->ARR11(3)                                      --------->AHL20(2)                                      <---------AHL20(2)                                     --------->AHL20(2)                                     --------->YAB1   ----------->GT1           --------->ICU4                                 <---------ZAT14 <---------GLK1(2)         <---------bZIP60(1)               ----------->GT1--------->ZAT14 -->GT1 --------->bZIP60(1)--------->TGA2(1)                <---------TOE2(3)    --------->ZAT14 ------->ICU4              --------->bZIP60(1)              <---------TOE1(3)    <---------ZAT14 -ANAC46<---------bZIP60(1)<---------TGA2(1)          <---------TOE1(3)     --------->ZAT18     <---- --------YAB1  <----------DOF2  <---------YAB1        <---------TOE2(3) --------->ATHB12        <----   aaagattgtgacttcatcttttgagaatgacatcatgaattaaaatattgctgtctaaggttaaggtaaaacaaagattgcactgcattcgttctctagc  2972700  Previous    Next  AGI:  At1g09200.1    Description:  histone H3. Identical to Histone H3.2 (HTR1) [Arabidopsis Thaliana] (GB:P59226); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G10390.1); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G65360.1); similar to histone H3 [Arabidopsis thaliana] (TAIR:AT5G10400.1); similar to Histone H3.2 (GB:P68427); similar to histone H3 (H3-1.1) (GB:AAA32655.1); similar to histone 3 (GB:AAA33907.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H3; (InterPro:IPR000164) Range:  from: 2971595    to: 2972201    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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