Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <----------DOF2                     <---------DAG2                   ------>MYB83                                --------->ANAC58                   ------>MYB46(1)                             --------->ANAC55(2)                 ------->GAMYB                                 --------->ANAC46               --------->ANAC58                                --------->ANAC58       <----------DOF2           --------->YAB1                                     <---------LBD16       --------------->AGL15           ----------->GT1                            <---------TOE1(3)      --------->YAB1  <----------ID1--------->MYB46(3) <---------GLK1(2)  <---------TOE2(3)   ---------->DOF2 ---------AGL3 --------->ANAC58<-----------GT1    ----------------------->TaNAC69(2)<---------------AGL15   aatgagaacaaaatggtaaccaactttactaaatttcgattctcatccaaaaatttgaggtttctacggaattactcaaagataaactctttttggttaa  2955300                                                                        --------->MYB46(3)                                                                      ----------->RAV1(1)               <---------AHL20(2)                               --------->GLK1(2)               --------->AHL20(2)                              <---------GLK1(2)            --------->AHL20(2)                              <---------HSFB2a(2)                  <---           --------->AHL20(2)                               --------->HSFB2a(2)              <-------TEIL     ------>MYB46(1)                       --------->TOE1(3)<---------HSFC1(1)            <---------At4g35610     ------>MYB83--------->AHL20(2)        --------->TOE2(3)--------->HSFC1(1)            --------->At4g35610   <---------MYB59    ----------->GT1<------ZmHOX2a(1)  --------->GLK1(1)           <----------DOF2   tggaaccaaacaaataaaaaaatatagagaaaatgcagaggaaaaccctaatctagagaattctagaatctccaacaattggctatcttttgagatgcag  2955400         ---------->DOF2                      --------->ZAT6     ------->TEIL                            --------->ZAT18 ---ZmHOX2a(1)                          ---------->DOF2<---------TOE2(3)                       <-----   gaaaatgtatcgaaagtagaatcgagcaatagcaaaatcagtaaaagaacactaattgaggcttcttcgcagtcaataaactcaccaaaatgaaatcgcg  2955500                ------>ZmHOX2a(2)               <------ZmHOX2a(2)              <---------ARR11(3)                                                            ---------              --------->ARR11(3)                                                     --------->DEAR3(1)              --------->ARR14(2)                                                     --------->RAP2.3(2)              <---------AGP1                            <---------At4g35610         <----------------              --------->AGP1                           <---------DEAR3(1)       <---------ANAC58         ----------->RAV1(1)                          <------NtERF2         <---------GLK1(1)         --------->MYB52(1)     <---------ANAC46    <---------DEAR3(1)    <---------GLK1(2) <--------        --------->ANAC46        <---------ANAC58<---------AtMYB61     ---------->DOF2--------->RAP2.3(3)      --------->ANAC46    --------->ICU4        <---------TOE2(3)    <------ZmHOX2a(1)<---------RAP2.6(3)   --------->ZAT14      ---------->DOF2--------->ARR11(3)   <---------GLK1(2)   <---------ANAC58    - ----ANAC46   <---------ARR14(2)<---------ANAC58<---------TOE1(3) <---------LBD16   =================   agtagtatacacaacagatctagcagaaaagatgacttgtagataatgctaaggtcgtcgctgattcttcaggaaagaatttccgagccgtcttcggtaa  2955600                                                                                                  <--                                                                                                -----                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                              -------                                                                                              =======                                                                                           ----------                                                                                           --------->DEAR3(1)                                                                                   --------->ANAC58  --------->ANAC58                                                                 --------->ANAC58 <  --------->ANAC58                                                          <------------CBF  ======= --------->SPL7     ----------->HVH21                                       <---------ARR14(2)<------ >HSFB2a(2)        <-----------HVH21                                    ============================= -AG              <---------ANAC46                                      --------------->AGL15 <------ -HSFB2a(2)  --------->ARR14(2)  ---------->DOF2                       <-----------------AGL1 ------- -------->MYB52(1)--------->O2 <---------TOE2(3)                     *TSS   --------->ARR14(2)<------ =======================================================================================MADS_MADS----   gcgaacggaagtctgaaaccgcgtgagaggtttaagaaaggagaagagaaacgaagttgcagagtgagagttttctcagattgggaagaaacagcgacgc  2955700  <--------P <-------GAMYB ----NtERF2 ---->ALFIN1 -----ANAC46 >NtERF2 ----LBD16                                              <---------WOX13(1)            <------ZmHOX2a(1) -->TGA1a                                              <------------CBF             --------->ANAC58 ==========MYC_MYB                                   <---------AHL20(2)        <---------TOE2(3) ->HVH21                <---------TOE2(3)          <---------ANAC55(2)         --------->MYB59 ---------MYB46(3)--------->AHL20(2)               --------->ANAC55(2)      <---------DAG2 ========MYC_MYB  --------->AHL20(1)      <---------HSFC1(1)                <----------DOF2 ---O2            <---------AHL20(2)      --------->HSFB2a(2)            <---------------AGL15 =========================================================================================MADS_MADS ---TGA1a        <---------AHL20(2)       --------->HSFC1(1)            ----------------->AGL1 -->O2     <---------At4g35610            <---------HSFB2a(2)           <-----------------AGL1     <- ---ANAC46 --------->At4g35610 <---------YAB1    --------->AHL20(2)     <-----------------AG     <--- ----->LBD16     --------->AHL20(2)  ------->TEIL<-----------GT1  ---------->DOF2   --------->ANAC58   gggggttagagacagctaattttattaagaaatatgatgaacttctcgaaattacttaattgcccctcaaaagtcccgctttaggtaaggaattgtatta  2955800                            --------->ARR14(2)                            <---------ARR14(2)                --------->AHL20(2)                                               --------->ICU4                --------->YAB1                                            <---------ANAC58            <---------AHL20(2)                                            <---------ANAC46        <---------TOE2(3)----------->GT1    <---------YAB1                <---------ANAC58 ----------->GT1-------->HAHB4           <---------YAB1               --------->ATHB12 --------ZAT14 <---------YAB1<----------TaMYB80                       -------->HAHB4 ------YAB1 --------->AHL20(2)--------->KAN4(2)                      <---------ATHB12     ---------->DOF2   gtatagttttaagtttaattatagaaatcgtatattcttaagtttgattatagaattagtattttctgcaaatgattcgtgcaatatttgtttaaagcat  2955900                                                               --------->GLK1(2)             <<<<<<<<            <-----------GT1                                <------ZmHOX2a(1)      <----------DOF2         --------->YAB1              --------->MYB52(1)   <------MYB83 <---------AHL20(2)    <<<<<<<<       --------->AHL20(2)         --------->YAB1          <------MYB46(1)   <-----------GT1  <<<<<<<<      --------->AHL20(2)       <----------DOF2          <--------P<---------AHL20(2)    <---------ANAC58      --------->YAB1  --------->TOE2(3) ------->GAMYB<---------TOE2(3) <---------YAB1   <---------ANAC58   ttttgtaataaaaataacaaattttcttaaatactttcataacggacacatttttagggtaggagaatttttttttattaacttcttttttcttggtcaa  2956000                                           --------->ICU4                                      ----------->GT1                            <---------ICU4                                      --------->YAB1                            <---------YAB1                                  --------->LBD16                               --------->ICU4                                 <---------ANAC46                             --------->YAB1                                 <---------ANAC55(2)                         <---------YAB1       <-----------GT1        <---------ARR14(2)                            <---------ARR11(3) <---------YAB1               --------->GLK1(2)       <------MYB46(1)       --------->ARR11(3) <<WRKY43                    --------->RVE1(1)<-----------GT1              --------->RVE1(1) <<WRKY38           ----------->GT1 --------->ZAT14   <------MYB83         --------->CCA1(1) <<WRKY26       <---------YAB1--------->ARR14(2)   <---------MYB52(1)  --------->AHL20(2)   attttgatttaactaaatctgattgtgaaaaaaatccgtatagtaatatttctgtttggtttttttttataaaaaaaatatcataatggacacagttttc  2956100                                         --------->ANAC46                                         --------->REM1(1)                                     <-----                                       <-----------GT1                                         <-----                          <---------ANAC58                                                     <-----                          <---------AtLEC2                                                   <-------                          <---------ANAC58       ------>MYB46(1)                    ---------->ID1        <-----------GT1   <---------ANAC46       ------>MYB83                 --------->ATHB12 <-----   gatatgtgtttgactatttggctaatttgcttgtagcagttttacatcaccatccatctagtcaaactgccatcaaaaactgatttggctcttattaact  2956200  Previous    Next  AGI:  At1g09160.1    Description:  protein phosphatase 2C-related / PP2C-related. similar to protein phosphatase 2C-related / PP2C-related [Arabidopsis thaliana] (TAIR:AT1G68410.2); similar to protein phosphatase 2C-related / PP2C-related [Arabidopsis thaliana] (TAIR:AT1G68410.1); similar to Protein phosphatase 2C-like [Medicago truncatula] (GB:ABD28356.2); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR015655); contains InterPro domain Protein phosphatase 2C, N-terminal (InterPro:IPR014045) Range:  from: 2952773    to: 2955669    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version