Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100           <---------ICU4        --------->ICU4        <---------YAB1                                                             ----------->GT1    <-----------TGA1                                                             <---------ANAC46   <---------ANAC58                                                              <---------bZIP60(2)   <---------ANAC58                                                              ----------->GT1 --------GLK1(1)                                                                <---------AtMYB61 ------->CCA1(2)                                                              --------->ALFIN1 -------ARR14(2)                                                             <-----------HVH21 ------>ARR14(2)                                                          <---------LBD16 -------ARR11(3)     <------ZmHOX2a(1)     --------->AHL20(2)           ------->MYC3 ------>ARR11(1)     --------->YAB1      <---------TOE2(3)              <---------ARR14(2) -------GLK1(2)     ----------->GT1<---------YAB1  <---------ZAT14      ------->MYC2 ------>ARR11(3)   <---------TOE2(3)  <---------YAB1                    <-------MYC2 ------>ARR10<-----------GT1  <----------DOF2     <---------ZAT6        <-------MYC3    --------->ICU4   gatttgcgtcataatttacataaggataatttcttttgttattaatgaattagtgtaatgccaaaactactgcatatgcggtgaggtgtaatatttggaa  2932300                          <---------AHL20(2)                          --------->AHL20(2)                   --------->ANAC46                   --------->ANAC58                   --------->ANAC58                 <---------ALFIN1  --------->ANAC58                --------->MYB46(3) --------->ANAC58                               <---------ZAT14              <-----------GT1      --------->ANAC46                     <-----------GT1         --------->ICU4  --------->AHL20(2)  --------->AHL20(2)     <---------YAB1--------->ZAT14   gaacatgactaatgcttaaccactccatttatttatcacgcagacatatatataagaaatatgccattttctaattactctcagtgttgtatttgtattg  2932400                                                               ------>NtERF2                                                              --------->RAP2.6(2)                                                              ------>NtERF2                                                              <---------ATERF1(1)                                                              <---------ERF1                                                              <---------RAP2.3(1)                                                             <---------ATERF1(2)                                                             <---------DEAR3(1)                                                             --------->ATERF1(2)                                                             <---------ANAC58                                                             <---------RAP2.6(2)                                                             <---------RAP2.3(3)                                                             <---------RAP2.3(2)                                                             <---------RRTF1(2)                                                        --------->MYB52(1)                                                     --------->TOE2(3)                                                     --------->TOE1(3)                                                     ------->GAMYB  <---------TOE2(2)                                                   ------>MYB46(1)  <---------TOE1(2)                                                   -------->P<---------RRTF1(3)                                                   ------>MYB83<------NtERF2  <---------ANAC58                                                 --------->AtMYB61 --------->STY1(1)     <---------AHL20(2)                                          --------->ANAC46   <---------DREB2C(2)        --------->AHL20(2)            --------->YAB1                --------->ANAC58   <---------ANAC58 <---------ANAC58  <----     <---------ZAT18            <----------ID1  --------->MYB46(3) <---------STY1(1)  --------->TOE2(3)    --------->AtLEC2 --------->ARR11(3)   --------->ANAC58  --------->RAP2.6(3)       --------->YAB1   gaatcaatgcacaataagaattggatattggataacaacaaaacaggcaaaccaaccctaatggcggccctaggtttttggcttctaatattaattcact  2932500              <-----------GT1          <--------ATHB1          --------->ATHB12                                       <---------AHL20(2)          -------->HAHB4                                 <---------ATHB12      --------->ICU4          --------->ATHB51                         ----------->GT1   --------->ZAT6          <---------ICU4                      <-------GAMYB      --------->AHL20(2)         --------->AHL20(2)                  <---------ANAC46 --------->AHL20(1)         <---------AHL20(2)                  <---------ANAC58 <---------AHL20(1)         <---------ATHB51                    <---------ANAC58 --------->AHL20(2)            ---------     --------->AHL20(2)                   <-----------RAV1(1) <---------ARR11(3)            --------- ------DOF2 <---------WOX13(1)      --------->AHL20(2) --------->WOX13(1)      <---------YAB1    ----   ttcaaaactaaataattgaccatatatcatttgatttttaaaatatgtcgttggagtaaatcaatattttaatactaagttataattcatatggtatact  2932600                                     --------->AHL20(2)                                     <---------AHL20(2)                                <---------AHL20(2)                                <---------AHL20(1)                                --------->AHL20(2)                             <---------AHL20(2)                                                    --                        --------->ICU4                                         <----------DOF2-------    <-----------HVH21   <---------AHL20(2)                                   <---------MYB52(1)------ >ZAT14---------->DOF2  <---------YAB1                ----------->GT1 <---------YAB1          <------ >ARR14(2) ----------->GT1 <---------YAB1            ----------->GT1 --------->AHL20(2)   --------->AHL20(2) ----->ANAC46      ----------->GT1   <---------AHL20(1)             --------->YAB1   <-----------GT1   cgaaattgtcaaagggtaatatggatattattattttattttattttttgttagaagggtaatatgggcattataatccgtcttttttgacattatataa  2932700                                                                                               ------                                                                         --------->DAG2       <------                                                                     <-----------RAV1(2)      -------                                            <---------ANAC58       <-----------TGA1          <-------                                            <---------LBD16   <---------HSFB2a(1)         --------->GLK1(1)          --------->ANAC46   <---------AHL20(2)               --------->HSFB2a(1)         <---------GLK1(1) ------->AHL20(2)         <---------TOE2(3) <---------ANAC58  <---------HSFC1(2)         --------->ARR11(3) -->AHL20(2)      ----------->GT1          <---------LBD16    --------->HSFC1(2)   --------->ANAC58 --->AHL20(2)     <---------ANAC46       *TSS--------->LBD16<---------GLK1(2)      --------->ANAC58 ---AHL20(2) --------->MYB52(1)<------------CBF   <------ZmHOX2a(1)<-----------HVH21     <---------ARR11(3)   attacatagtatacaaaacagcgtgaataatgtaattgtagtgaatgcgggaggaagaaatggaatcttcgtcagaaggtgagacaaacaagatttcccg  2932800   --------->ANAC58                                       <---------ANAC58   --------->ANAC58            ====================HOX2a_HOX2a                                  ----- ---------->DOF2               <------ZmHOX2a(1)          <---------ANAC58                      <---- --->LBD16              ===========================HOX2a_HOX2a      --------->MYB46(3)         <----- ---HSFB2a(2)           ------>ZmHOX2a(1)               --------->ALFIN1                      <------NtERF2 -->HSFB2a(2)         --------->YAB1        <------ZmHOX2a(2)  --------->ANAC58              -------- --LBD16            <---------ARR14(2)     <---------ARR11(3)  --------->ANAC58              ------>NtERF2   atgcaaagccactggttcagacaatcctgatgaggactacgtcgagatcacactcgaagtgcgagacgaaaccatcaacacaatgaaggccaaggcgaca  2932900                                                                 ----------->HVH21                                                                 --------->ETT(2)                                                              <------NtERF2                                                              <---------ZAT2                                                             <---------ATERF1(1)                                                             ------>NtERF2                                                             <---------DEAR3(2)                                                            <---------DEAR3(1)                                                            --------->ATERF1(2)     <------MYB46(1)                                                            --------->DEAR3(1)      <---------ANAC58                <---------MYB52(1)                          <---------ATERF1(2)     <------MYB83          <----------DOF2                                  <---------LBD16          <---------ANAC58     <------MYB83                                          --------->RAP2.6(3)     --------->MYB46(2)     <------MYB46(1)                                     --------->ANAC58          <---------MYB46(3)    --------->MYB52(2)                                   --------->ANAC46          --------->MYB52(2)  <---------MYB52(1)--------->At4g35610                  --------->ANAC58          --------->MYB55(2) <---------SPL7--------->LBD16                         <---------ALFIN1            <---------DEAR3(1) ---->HSFC1(2)--------->HSFB2a(2)                    <-----------HVH21            --------->SPL7 -----HSFC1(2)<---------LBD16   <---------MYB46(3)  <---------ANAC58             <---------MYB52(1) ----ALFIN1   <---------HSFB2a(2)<-------GAMYB      <---------ANAC58            <---------SPL7 --->RAV1(1) <---------LBD16    ----------->GT1 <---------MYB52(1)<---------WRKY18(1)      <---------YAB1   cttcgttcggttctttccgggaggctgaaaacgatggttaagtcgctatcgtttgcttcacgccggctcgaccgtagtaagtcgttcggtgctatgtttg  2933000                                      <------MYB83                                      <---------MYB46(3)                                      <------MYB46(1)                                         -------                                     <---------AtMYB61                                        <------                --------->ATHB12    <---------MYB52(1)                                        <------                --------->MYB52(2) <-------GAMYB                                              -------               <-------TEIL      <------NtERF2                                            -----------           <---------TOE2(3)    ------>NtERF2 <---------ANAC46                       --------->WRKY12           <---------TOE1(3)   <---------DEAR3(1)                <---------TOE2(3) --------->At4g35610        --------->ALFIN1       --------->ANAC46                <---------ATHB12    <-------GAMYB       <-------GAMYB           --------->DEAR3(1)     <---------TOE2(3)           <---------MYB46(3)   ctcttcgagggttgaggttcattgccaaaaacgacgccgttggtagaggctgggatgaggttgcaatgaggtttgataagttggccgttgaagggaaact  2933100         --------->ARR14(2)         <---------ARR14(2)      <---------------AGL15     ----------------->AG                             <---------DAG2     ----------------->AGL1                           <---------------AGL15     =================================================================MADS_MADS     ==================================================================MADS_MADS     <-----------------AGL3                           --------------->AGL15     ----------------->AGL3                          <-----------------AGL1     <-----------------AGL1                          <-----------------AGL3     ----------------->AGL2                        <-----------GT1     <-----------------AGL2                    --------->AHL20(2) -->HSFB2a(1)                                 <---------AHL20(2) ---HSFB2a(1)                             --------->AHL20(2) ---HSFC1(2)                            --------->TOE2(3)                                         --- -->HSFC1(2)                            <----------DOF2<----------DOF2   <-----------GT1    <-------- >GT1<-----------------AG               --------->TOE1(3)             <---------AHL20(2)    ---------   ccctaaatccaaatttggacattgcataggtaaacaaaaaaactttaaataatataccttttttggtttcatttttttctctctgtaatttcactgcaat  2933200  Previous    Next  AGI:  At1g09090.1    Description:  ATRBOHB (RESPIRATORY BURST OXIDASE HOMOLOG B); FAD binding / calcium ion binding / iron ion binding / oxidoreductase. Identical to Respiratory burst oxidase homolog protein B (RBOHB) [Arabidopsis Thaliana] (GB:Q9SBI0;GB:O04020;GB:O04021;GB:Q84TJ9); similar to RBOHD (RESPIRATORY BURST OXIDASE PROTEIN D) [Arabidopsis thaliana] (TAIR:AT5G47910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17538.1); similar to respiratory burst oxidase 2 [Medicago truncatula] (GB:AAW78864.1); similar to Respiratory burst oxidase homolog protein B (StRBOHB) (NADPH oxidase RBOHB) (GB:Q948T9); contains InterPro domain Cytochrome b-245, heavy chain; Range:  from: 2932741    to: 2936588    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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