Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                                                                                       <---------ANAC46                                                                                       <---------ANAC58                                                                                       <---------ANAC58                                                                                       --------->O2                                                                                       <---------TGA1a                                                                                       --------->TGA1a                                                                                       <---------O2                  ----------->GT1                                                      ==============              <---------ZAT2                                                         --------->LBD16   <---------ARR14(2)                                                                ------>NtERF2   --------->ARR14(2)                                     --------->TOE2(3)         <---------DEAR3(1)  <---------CCA1(2)             <---------YAB1    <---------ARR11(3)           --------->ZAT6<------- -------->YAB1--------->ZAT2    --------->ICU4--------->YAB1        --------->YAB1  --------->ANAC46 ->ICU4     ------>ZmHOX2a(1) --------->CCA1(2) <---------YAB1     <---------ATHB51<---------LBD16  -   gatcatatccaatcctagcagagtaaaatgcgatatgattactacatatcatgatatcaacatcaaacaataataagtctaactctccggcgtgtctttg  2927300          ------->TEIL                    --------->LBD16       <---------ANAC55(2)               <---------ANAC46       --------->ANAC46                --------->MYB52(1)       --------->ANAC55(2)            <---------SPL7       <---------ANAC58              <---------ANAC58       <---------ANAC58    --------->ANAC55(2)      --------------->AtSPL3         <---------ANAC58                                              <-      --------------->AtSPL8  <-----------GT1                                                     <--     <-----------GT1       <---------ANAC55(2)                         --------->ATHB12           <-- ------>ID1                --------->ANAC58                 <---------ICU4                      ----- ===bZIP_DOF<---------MYB59--------->ANAC58       --------->ANAC46    <---------YAB1         -------- ---DOF2  --------->MYB52(1)<---------MYB52(2) <---------ZAT14  <---------ARR11(3)          --------- ----->ZmHOX2a(1)      <-----------HVH21<---------LBD16     --------->YAB1           <----------DOF2   tcctattttacgtacctgattacgttgtcaagtaaccaggcttacggagaacaccgaattgatcatggtcttatcatttgagacattctttaaaacgttt  2927400                                                                                               ------                                                                                               ======                                                                                               <-----                                                                                               ======        <---------ARR14(2)                                                                    -------        --------->ARR14(2)                                                                  <--------        --------->ARR11(3)                                                                 --------->AHL20(2)        <---------ARR11(3)                                                              <---------AHL20(2)        <---------ARR11(1)             --------->ZAT14                                  --------->AHL20(2)  <-----------GT1                  <-----------GT1                                      --------->ATHB51 --------ICU4                      --------->ZAT6                                       <--------ATHB1 -------YAB1                      <---------YAB1                                        <---------ICU4 -------AHL20(2)                <---------ICU4                                         <---------YAB1 ---->YAB1         --------->DOF5.7(2) <---------ZAT14           <---------AHL20(2)    --------->ICU4 ->TOE2(3)      ------->TEIL    --------->YAB1     <-------TEIL <---------YAB1       --------->YAB1 -->GT1<---------CCA1(2)       --------->ICU4     --------->CCA1(2)                 --------->AHL20(2)   ataatttccatatctttgaacgtttacattgccattatcactaaactcttagatacacatgagtttattatttgaaccatggtcaaataataatttacta  2927500                                                    --------->DAG2             <---------AHL20(2)                    ---------->DOF2                                <--             --------->AHL20(2)               ----------->GT1                                     <--         <---------YAB1            <---------------AGL15                         --------->TOE2(3)<--        --------->ARR11(3)         --------------->AGL15                --------->ARR14(2)    ------- --------->AGL15                  ============================================MADS_MADS       <------ ===================================================MADS_MADS      ---------->DOF2------>ZmHOX2a(1) ----------AGL15                  ----------------->AGL3          --------->AHL20(2)          ------- ==================================================MADS_MADS      <---------AHL20(2)         -------- ---------->AGL2      <---------At4g35610     <----------ID1  --------------->AGL15          -------- ---GT1 <---------ARR11(3)        <-----------------AGL3      <---------------AGL15        --------->AHL20(2)   aaaacagcaagataattaaacttcagataagaagaaactaatattagaaggaaaaaagctatttgcatttaaagaaaccgcgtccttaacaaaaaaaatc  2927600             ===============================bZIP_DOF             <---------ANAC58             <---------ANAC58             --------->TGA1a             <---------ANAC46                           --------->YAB1     <-----------HVH21                                 <---------YAB1  <---------ANAC58                                 <----------DOF2  <---------ANAC46                               ------>MYB83  <---------ANAC58                            --------->DEAR3(2) -------ANAC46                             ---------->DOF2 -------ANAC58   ----------->GT1         ------>ZmHOX2a(1) -------ANAC58--------->LBD16           --------->TOE2(3)  <---------ICU4 -->ARR11(3) <---------TGA1a            --------->TOE1(3) <---------YAB1                            - ---ARR11(3) --------->O2            ---------->ID1<---------DAG2                        <----------DOF2 -->GLK1(2)  =========================================bZIP_DOF <-------TEIL              <---------DAG2 ->RVE1(1)   =================================================bZIP_DOF     ------>ZmHOX2a(1)  <------ ->CCA1(1)   <---------O2        <----------DOF2 ------>MYB46(1)  <-----------TBP     <---------ALFIN1   tcgtgcgtgtccctcccgtgtgtaaaaaaaaaactctttgttccttaaaccgactttatcataaatgcatatatatcctttgccctctccacttttcttt  2927700                                                                                                  ---                                                                                       ------>ZmHOX2a(2)                                                                                     <---------ARR14(2)                                                                                     <---------AGP1                                                                                     --------->ARR14(2)                                                                               --------->ATHB12   ---                                                                              <------ZmHOX2a(2)   <--                                                                              =======================                                                                      <---------ANAC58 ==============                                                                      <---------ANAC46<---------At4g35610                                                          --------->LBD16     <---------YAB1     <---      *TSS                                              ------>ZmHOX2a(2)    --------->ARR11(3)------    --------->YAB1                                     <------ZmHOX2a(2)     <---------ARR11(3)------   <---------YAB1                                     <---------ARR14(2) <---------ZAT14   <---------YAB1 ----->ZmHOX2a(1)                                     --------->ARR14(2)--------->ALFIN1----------->HVH21 ----DOF2                                <---------AHL20(2)           <---------ANAC58--------->At4g35610   tcctcatcataaaaaacattctcagagcaaatttcaagtttatttcattcaatttcgatccgagtaaccatggagtgtagatcattggatctgacgatta  2927800           ------>ZmHOX2a(2)          <------ZmHOX2a(2)          --------->GLK1(1)         <---------ARR14(2)         <---------AGP1         --------->ARR11(3)         --------->ARR14(2)         --------->GLK1(2)        ==============================HOX2a_HOX2a        <------ZmHOX2a(1)    --------->LBD16                                     <---------DEAR3(2)  <---------LBD16                                     <------NtERF2            <------ZmHOX2a(1)  --------->At4g35610                                 <---------MYB52(1) --------->ANAC58 ------>ARR11(3)                                     ------>NtERF2       --------->ANAC58 ------>ARR14(2)                                     <-----------HVH21  <------NtERF2 -------ARR14(2)                                    --------->DEAR3(1) ------>NtERF2 ==============HOX2a_HOX2a                       --------->ANAC46      <---------ATERF1(1)          < ==============HOX2a_HOX2a      ----------->GT1  --------->ANAC58     <---------DEAR3(1)           <- ------CCA1(2)        <-------TEIL        XXXXXXXXXXXXXXXXXXXX>MIR4228--------->DEAR3(1)        <---- --->YAB1<---------ARR11(3) --------->ATHB12     --------->ANAC58   ------->GAMYB       --------->At4g35610 --->AHL20(2) ---------->DOF2  ------>ZmHOX2a(2)--------->SPL7   --------->MYB52(1)  --------->At4g35610   tatctgcggaggatctcaaagacgttcaattgatcggtaaacaagacttgtacgccgtcgtttccatcaacggcgacgctaggacgaagcagaagacaaa  2927900                                                                        ----------->HVH21                                                                      --------->TGA1a                                                                      <---------ANAC58                                                                      --------->ANAC55(2)                                                                      <---------ANAC55(2)                  <---------MYB111(2)                                 <---------TGA1a                  <---------MYB111(1)                                 <------NtERF2                  --------->MYB46(3)                                  <---------ANAC58                  <---------MYB52(2)                                <---------ANAC46                  <---------MYB46(2)                               --------->ATERF1(1)                  <---------MYB55(2)                               <------NtERF2                  --------->AtMYB61                               <---------ATERF1(1)                 --------->ANAC58                                 <---------DEAR4(2)                 <------NtERF2                                    <---------RAP2.3(1)                 --------->ANAC58                                <---------DEAR3(1)                ------>NtERF2                                    <---------RAP2.3(2)              <------NtERF2                                      --------->DEAR3(1)            <---------RAP2.6(2)                                 --------->ZAT2           <---------LBD16                                      <---------ZAT2       <---------ICU4  --------->TOE1(3)                        <------NtERF2       --------->ATHB12--------->TOE2(3)                    --------->ANAC46      <---------YAB1   <---------MYB59       <---------At4g35610--------->At4g35610      --------->ICU4------>MYB46(1)          --------->At4g35610<---------At4g35610    ---------->DOF2 ------>MYB83            ------->TEIL  <---------TGA2(2)                         < -------TEIL<---------RAP2.3(2)          <---------ATHB12----------->HVH21                          - -------P  --------->RAP2.6(3)  --------->ANAC58         ----------->TGA1      --------->YAB1    <--- -----TOE2(3)<---------RAP2.3(1)--------->ANAC58   --------->DEAR3(1)------>NtERF2               ----   ggttgataaagattgcggcaccaaacctaaatggaagcatcaaatgaagctcaccgtcgatgacgcagcggcgcgtgacaatcgtcttactcttgttttc  2928000            ------>ZmHOX2a(2)           <------ZmHOX2a(2)          --------->ARR14(2)          <---------ARR14(2)          <-----------ARR10         <------NtERF2        <---------MYB46(3)                                                               <---------bZIP60(2)       <---------ANAC46                           <---------ANAC58                       <---------O2       <---------ANAC58                  <---------MYB52(1)                             <------------       <---------ANAC58               <---------DREB2C(2)                             ----------->TGA1      <------NtERF2                   <---------DEAR3(1)       <------ZmHOX2a(1)      ----------->HVH21  ------>ZmHOX2a(2)                   <---------At1g77200      ==================HOX2a_HOX2a      --- <------ZmHOX2a(2)                    <---------DEAR4(1)--------->LBD16          ---------->DOF2  --- ---------ARR11(3)                  <-----------HVH21  <---------ANAC46   <------ZmHOX2a(2)  <------ZmHOX2a(1) -------->ARR11(3)                 <-----------RAV1(1)<---------LBD16     ==========================HOX2a_HOX2a ------HSFB2a(2)               <-----------GT1    <---------ANAC58 <----------DOF2 <---------TOE2(3) ----->HSFB2a(2)        ----------->GT1<---------DEAR3(2) ----------->HVH21--------->YAB1<---------ANAC46   gagatcgtggcggatcgtcccatcgctggtgataaacctgtcggtgaggttagcgttccggtgaaggagcttttggatcagaataaaggtgacgaggaga  2928100                    <--------P               <---------MYB52(1)              <-----------HVH21             <---------ANAC46                                                                    ----          --------->ANAC46                          <---------GLK1(2)                            <---      <---------ANAC58                       ------>ZmHOX2a(2)                            ===========      <---------ANAC58    --------->MYB52(1)<------ZmHOX2a(2)                             ------>ZmHOX2a(2)     --------->MYB52(2)  ----------->HVH21  --------->GLK1(1)                            <---------GLK1(1)   <---------MYB52(1)   <---------MYB46(2)  <---------GLK1(1)                           ------->TEIL  --------->At5g28300   <---------MYB59    --------->ARR11(3)                           --------->ARR11(3) ----------->GT1  <---------bZIP60(2)      --------->ARR14(2)             --------->DAG2<---------ARR11(3) -----------TaNAC69(2) <---------ANAC58    <---------ARR11(3)            ============================ ------>MYB52(1) <---------AtMYB61         <---------ARR14(2)            ---------->DOF2--------->ARR14(2) --------->MYB.PH3(1)  <---------ANAC58   <------ZmHOX2a(1)         <---------LBD16     <---------ARR14(2)   aaacggttacttacgccgtgaggttgcctaacgggaaggcgaaaggatctctcaaattctcgttcaaatttggggaaaagtatacttatggatcttcgag  2928200  Previous    Next  AGI:  At1g09070.1    Description:  (AT)SRC2/SRC2 (SOYBEAN GENE REGULATED BY COLD-2); protein binding. similar to C2 domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G16510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70977.1); contains InterPro domain XYPPX repeat (InterPro:IPR006031); contains InterPro domain C2 calcium-dependent membrane targeting (InterPro:IPR000008); contains InterPro domain C2 calcium/lipid-binding region, CaLB (InterPro:IPR008973) Range:  from: 2927706    to: 2928971    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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