Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                 <---                                                                                                 ----                                                                                                <----                          --------->LBD16                                               --------->AHL20(2)                          ----------->GT1               --------->AtLEC2             --------->TOE2(3)                        <---------LBD16                <-------MYC3                  --------->YAB1--           --------->At4g35610                         <-------MYC2            --------->ZAT6  ------        <---------At4g35610 ----------->HVH21          ------->MYC2            --------->ANAC58------        --------->At4g35610--------->At5g28300         ------->MYC3            --------->ANAC58------   tcgactcttcagcagaagaaacaaaacccggtgaaacttcaaacttcaacgcttacacatgcagagagtccgaattcaataacgctaccataaattccag  2904400                                                                                             --------                                                                                             --------     ---------->DOF2                                                                         --------     <---------ZAT14                                                                         --------     --------->ZAT14                       ------->GAMYB                                     <------- -------->MYB46(3)                 <------ZmHOX2a(2)                                         -------- ------MYB111(2)                  --------->ARR14(2)            <---------ALFIN1          ------>MYB83 ----->MYB46(3)               <-----------GT1                  --------->ANAC46           ------>MYB46(1) -----At4g35610               --------->YAB1      <---------ANAC55(2)                     -------->P ------>P                    <---------ATHB12   <-----------GT1--------->LBD16           ----------->RAV1(1) --->ANAC46        ---------->DOF2--------->ARR11(3)--------->ZAT14    <---------TOE2(2)--------->AtMYB61 --->ANAC58    --------->TOE2(3)  <---------ARR11(3)<---------ZAT18  --------->TOE1(2)  --------->MYB46(3) --->ANAC58    --------->TOE1(3)  <---------ARR14(2)<---------ZAT14  --------->TOE2(2) --------->MYB46(3)   caaccagtaaaccgaaaccctaaaagcccaaatcacgatctacaacgaaattactgaactcttcccccaaacctaggtagagaaattccaccaacacgaa  2904500                                                 ---------->DOF2                           <---------At4g35610                                   ------>ZmHOX2a(2)                                       --------->ZAT2                                  <------ZmHOX2a(2)      <---------At4g35610  --------->ZAT2     ---------->DOF2             --------->ARR11(3)      --------->At4g35610  ----------->RAV1(2) ->ANAC46                        <---------ARR14(2)    <---------WRKY12  --------->ANAC58  --------->At4g35610 ->ANAC58                        --------->ARR14(2)    <---------WRKY38(1)  --------->AtMYB61 ->ANAC58 --------->ZAT18      --------->HSFB2a(1)   <-----------HVH21   --------->ANAC58  <---------ZAT2 ->ANAC55(1)               --------->ANAC58   --------->ANAC58           --------->ANAC46 ------->TEIL --ANAC55(2)               --------->ANAC58   --------->ANAC58<---------WOX13(1)--------->HSFB2a(2) ->ANAC55(2)         ---------->DOF2        ---------->DOF2 --------->ATHB12<---------ALFIN1   accttgtaaaagagccctaaactcaaagcacgaacgatctggctacaaaagcaaaggtcaactgattgacaatacacaccacctggaaaacgtagctgaa  2904600                                     <---------ARR11(3)                                     --------->ARR11(3)                                --------->ARR14(2)                                <-----------ARR10                               <------NtERF2     <---------LBD16                             <---------DEAR3(1)  <---------HSFB2a(2)                             <---------RAP2.6(2) --------->HSFB2a(2)                      ========================HOX2a_HOX2a                      <------ZmHOX2a(1)   --------->AHL20(2)         ---------->DOF2     <------NtERF2<---------AHL20(2)                ------>ZmHOX2a(2)       <------ZmHOX2a(1)    <---------LBD16     <---------LBD16          --------->ATHB12    --------->LBD16--------->At4g35610  <----------DOF2                 <---------YAB1    <---------LBD16<---------At4g35610 ------>ZmHOX2a(2)      --------->ARR11(3)   --------->ATHB12   <---------ANAC46<------NtERF2<---------ARR14(2)--------->LBD16     --------->YAB1 <---------WOX13(1)   aaattccgaggaaaagaaggcagaggaagtcgcggctctgatctttaaattcggggagtagagagacctcgatgatgatcggaattgattgaagggaggg  2904700                                                                           --------->ANAC58                                                                           --------->ANAC58                                                                    ------>ZmHOX2a(2)                                                                  --------->ARR11(3)                                               --------->ALFIN1   <---------ARR14(2)        <---------TOE2(3)       --------->TOE2(3)                 <---------AGP1   <---------YAB1  --------->ICU4                --------------->AGL15             --------->ARR14(2) --------->ANAC58 --------->DAG2--------->TOE1(3)            <---------ANAC46    --------->YAB1 --------->ANAC58---------->DOF2<---------------AGL15       --------->ATHB12    --------->ICU4<------   agcaagaattagggatttgaaaagttggagagaaccctaaatagagagagtggagatggcattgtttggatctgggcaaggaatgatgttaatggtcttt  2904800                                                                         ----------->GT1                                                                      --------->CCA1(2)                                                                      --------->ARR14(1)                                                                     --------->ARR11(1)                                 <---------ANAC58                    --------->ARR11(3)             <                  *TSS           <---------ANAC46                    <---------ARR11(3)            <-           --------->ARR14(2)    <---------ANAC55(2)                 --------->ARR14(2)         <----           <---------ARR14(2)    --------->ANAC55(2)                 <---------ARR14(2)         <----           --------->GLK1(2)     <---------ANAC58                  ----------->ARR10        <--------       >>>>>>>>>TBF1    ---------->DOF2--------->YAB1            ---------->DOF2        ---------->ID1 ----DOF2 <---------GLK1(2)     ------>NtERF2                <---------ETT(2)          <-----------GT1   caaggtgaagaagaatctgagggcgaagaagcgctgcgtaatgaaaatgttgtttttaatccatcgacaaagatatggttttttttttttttctcttttt  2904900      <---------ZAT14      <---------ETT(2)      --------->ETT(2)                                              <---------YAB1      --------->AHL20(2)      --------->ZAT14                                              --------->KAN4(2)    <---------AHL20(2) -----------GT1                                          <---------MYB59               --------->AHL20(2) --------YAB1                                           --------->ANAC55(2) <----------DOF2 <-------- -----AHL20(2)                           --------->AHL20(2)--------->MYB52(1)        --------->YAB1 -----YAB1                  --------->AHL20(2)     <----------DOF2<---------KAN4(1) <---------YAB1 --DOF2                     <---------AHL20(2)     <---------DAG2<---------YAB1   --------->YAB1   tattactgtatacagtttttccgataacatttaaaaaaaaaaaaaaaattctacttttacataactgattattcttctcttttttcataataaataacta  2905000                                                                          --------->AHL20(1)                                       <---------WRKY12           <---------AHL20(2)            -----                                       <---------WRKY38(1)    ------>ZmHOX2a(1) <---------ANAC55(2)                                       <---------WRKY45       =======================================                                      <<<<<<<<<<WRKY6         --------------->AGL15             <----                          <---------AHL20(1)           <---------ICU4     <---------AHL20(2)    <----                          --------->ARR11(3)       <---------AHL20(2)     <---------AHL20(1)    -----                          <---------AHL20(2)       --------->AHL20(2)--------->AHL20(2)        ------                          --------->AHL20(1)      <---------ATHB12--------->AHL20(2) <---------TOE2(3) ---GT1      --------->YAB1           <<<<<<<<<<WRKY11<---------ATHB12<---------AHL20(2)   <---------YAB1   tatgaattatgcaaataatagcatctaatatatagttttagtcaactatctaataaatcatttcctatatatataatatatcacataaatgttatgaata  2905100                         <---------AHL20(1)                         <---------ARR11(3)                                --------->AHL20(2)           ------>ZmHOX2a(2)                                             <---------YAB1          <------ZmHOX2a(2)                                             <---------AHL20(2)         --------->ARR14(2)                                <---------------AGL15         <---------ARR14(2)  <-----------GT1               --------------->AGL15        <------ZmHOX2a(1)--------->ARR11(3)                <----------DOF2 <---------AHL20(2) ---->AHL20(1)           --------->AHL20(1)               <-----------------AGL3 ==========================================================================MADS_MADS -----AHL20(1)       <---------AHL20(2)       ------->TEIL<-----------------AG -----AHL20(2)      --------->AHL20(2)       <---------CCA1(2)          <---------AHL20(1) ---->AHL20(2)     <---------YAB1      <---------YAB1     <-----------------AGL2             <------- --->AHL20(2)   <---------ARR11(3) <----------DOF2----------->GT1     <---------YAB1       ----------   aattagacgaggatccaagttattaaaaatatttccactttaaaattgtatctagtaaattctttttttggtattatttttttaaactcatttgtctttt  2905200                                   <---------MYB52(2)        --------------->AtSPL8   ------>MYB83 ----------->GT1  --------->WOX13(1) ---DOF2--------->ZAT6           ------>MYB46(1)                <---------DAG2                  ----- >ID1 <-----------GT1          <---------MYB59                  <----------DOF2                ------   ctgatgttaaacagtactataaatcaaacaaaaccaaactaacattcaaaaacgtttcaaaatacacttttctcttattctcttgtgttttgaagcaggg  2905300  Previous    Next  AGI:  At1g09020.1    Description:  SNF4 (Sucrose NonFermenting 4). similar to 5'-AMP-activated protein kinase-related [Arabidopsis thaliana] (TAIR:AT1G27070.1); similar to AKIN betagamma [Medicago truncatula] (GB:AAO61673.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70995.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17587.1); contains InterPro domain Cystathionine beta-synthase, core (InterPro:IPR000644) Range:  from: 2899917    to: 2904818    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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