Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------->RVE1(1)                               --------->ARR11(3)                   ------>ZmHOX2a(1)                <------ZmHOX2a(2)               --------->ARR11(3)               <---------ARR14(2)                                                               -----               <---------ARR11(3)                                              --------->At4g35610           --------->YAB1----------->GT1                                       <---------At4g35610  --------->ZAT14------>ZmHOX2a(2)           <---------AtLEC2               ---------->DOF2    >>>>>> ----->ZAT14   --------->ARR14(2)          --------->AtLEC2          --------->TOE2(3)--------->YAB1 ------ZAT14 ----------->ARR10 <---------ARR11(3)                 <---------AHL20(2) <-------TEIL   acactgttcacaattaagatcctatatcagtaaaatctctcattcatgcatgaaacaattagaggtatttacataaataaaagctgattcataagaagaa  2899000       <---------AHL20(2)       -------->HAHB4       -------->ATHB1       <--------HAHB4       <---------ICU4       --------->ATHB51       --------->YAB1       --------->ATHB12      <---------ATHB51      --------->ICU4      <---------YAB1                                                                         --------   <---------AHL20(2)                                                                      <---------YAB1   --------->AHL20(2)                                                                    <---------ICU4   --------->AHL20(1)                                                                   <---------YAB1  --------->AHL20(2)                                                                    --------->ICU4 ------>GT1     <---------YAB1                                  <---------ANAC55(2)  <---------YAB1 >>>TBF1 <---------YAB1            ----------->HVH21      --------->AHL20(2)       <----------DOF2   gaaaattaattattagttatcaaggcaaaatccaaacttgacagacacattcgaacaaaatcaaatacttaaacaattgttcttactttgattattaata  2899100                                                     <------NtERF2                                                     <---------At4g35610                                                    ------>NtERF2                                                    <---------ERF1                                                    <---------RAP2.3(1)                                                    <---------DEAR3(2)                                                    <---------ATERF1(1)                                                   <---------DEAR3(1)                                                   <---------RAP2.6(2)                           <---                                                   <---------RAP2.3(3)                          <----                                                <---------DEAR3(1)     <-------TEIL           <------MYB46(1)                                               --------->SPL7         --------->GLK1(2)       <------MYB83                                               <-------TEIL           --------->ARR14(1)     <-------                                             --------->ARR14(2)      --------->ARR11(1)    <---------ARR14(2)                                             <---------ARR14(2)      --------->ARR14(2)    --------->ARR14(2)                                             <---------SPL7        ----------->ARR10      <------ZmHOX2a(1)                                   <-----------GT1 <---------RAP2.3(2)--------->CCA1(2)   --------->ATHB12                         --------->ZAT6    --------->LBD16   <---------MYB55(2)       --------->LBD16                      <---------ZAT18     <-----------RAV1(2)--------->MYB46(3)     <---------LBD16                      --------->ZAT18<---------ANAC58--------->ATERF1(1)   <---------ARR14(2)<-------                      --------->ZAT14<---------ANAC58--------->At4g35610   --------->ARR14(2)--------                 ---------->DOF2 <---------ANAC58<---------RAP2.3(1) <---------ARR14(2)<------NtERF2 ->YAB1         <------ZmHOX2a(1)<---------ANAC58<---------ATERF1(1) <---------GLK1(2)<------NtERF2   gcttcaaattttcgaagaggaaagtgaacactattacttacgttccaggtacggcggcttccatccaccgagattcggaactgatggccggaggattggt  2899200                                                                                  --------->LBD16                 --------->WRKY38(1)       ------>NtERF2                          ------>NtERF2                 --------->WRKY12        --------->RAP2.3(1)                     --------->ANAC46                 ----------->HVH21   ------>ZmHOX2a(2)                        ------>ZmHOX2a(2)     <---------ZAT2                 <---------GLK1(1)                        <---------GLK1(1)     --------->ZAT2                <---------ARR11(3)                        --------->GLK1(1)     <---------At4g35610           <---------ARR14(2)                        <------ZmHOX2a(2)     --------->At4g35610           --------->ARR14(2)                       --------->ARR14(2)   --------->ZAT18                 --------->ARR11(3)             --------->DEAR3(1)   <---------ZAT14                 <---------AGP1              <---------ALFIN1 <---------LBD16     - ------MYB46(3) <---------MYB52(1) <-----------ARR10    --------->GLK1(1)   <-----------ARR10<------- -----AtMYB61  <-------GAMYB      <---------CCA1(2)   <---------RAP2.6(3)   <---------ARR14(2)    <-- --MYB46(3)--------->ANAC58    --------->LBD16       --------->RAP2.6(2)  --------->LBD16    <------- --AtMYB61 --------->ANAC46   <---------ANAC46     <---------At4g35610   --------->HSFB2a(2) -------- ->ALFIN1  --------->ANAC58--------->AtMYB61       --------->At4g35610   <---------HSFB2a(2) --------   ggtagtgagctgaacgccgttgacatcgacctccgtggatctcgccgctatccagccgaaatctaacaccgtcttcccgatctccgccattttagtatct  2899300         --------->HSFC1(1)         <---------HSFB2a(2)         --------->HSFB2a(2)      --------->GLK1(2)     <---------GLK1(2)    <---------At4g35610    --------->At4g35610    <---------ZAT2 ----->ZmHOX2a(2) --ARR14(2) ---------ARR10 ----ARR10                                                                   ----------->GT1     <--- ->GLK1(2)                                                      ----------->GT1        *TSS      ---- ->ARR14(2)   --------->ICU4                                   ----------->GT1--------->TOE2(3)  ----   gatctcagcttctggaatgtttatgtcgaaaacagttgagagagttgatgaagaaacttgttggactggaaaaacgaaaacgtttattgtctggataagc  2899400                                                            --------->ZAT6                                                     -------->ATHB1                                                     <---------AHL20(2)                                                     --------->AHL20(2)                                                     <--------HAHB4             ----------->GT1                         --------->ATHB51             <---------ZAT6                         <---------ATHB12      --------->AHL20(2)                            <---------ATHB51    <---------ANAC55(2)                             --------->ICU4    <---------AHL20(2)  <---------AHL20(2)    ----------->GT1                               --------->WOX13(1) <---------YAB1  --------->AHL20(2) ------------AGL15                  <---------ANAC55(2)   <-----------GT1            <---------AHL20(2) ----->TOE2(3)            <-----------GT1       ------------>CBF  <---------YAB1  <---------ARR11(3) ----------->AGL15  <-------TEIL    --------->ANAC55(2)  <-----------GT1          --------->ARR11(3)   ctaaataagtaaatagagtaaatacatttttctctatcacttattatgtcatcaattatttaacacttatttttaatgacattagattttattttttttg  2899500                                  <---------AHL20(2)                          <---------AHL20(2)          <---------AHL20(2)  <---------AHL20(2)                                    --------->AHL20(1)          --------->AHL20(2) <---------AHL20(2)                                     <---------ARR11(3)    <---------AHL20(1)  <---------RVE1(1)               --------->ATHB12            --------->ARR11(3)    --------->AHL20(1) --------->ARR11(3)              <---------YAB1               <---------AHL20(1)    --------->ARR11(3) <---------ARR11(3)   <-----------HVH21             <----------DOF2<---------AHL20(2)    <---------ARR11(3) <---------GLK1(2)   <---------ZAT6 <---------WOX13(1)<---------YAB1   XXXXXXXX   ctcaaatattttttaaatgacattagatttttttatttttttttagtgtcactagatttgattgaattttgtattacttttattgatatattttaagagc  2899600                                                                               <----------DOF2                                                                         --------------->AtSPL8                                                                      <---------YAB1                                                                  <---------ANAC55(1)     <---------YAB1           ---------->DOF2                                        <---------ANAC58     --------------          --------->LBD16                                         <---------ANAC55(2) <---------ANAC58      <---------ARR14(2)                                          --------->ANAC55(2) <---------ANAC58      --------->ARR14(2)              <---------ATHB12       <---------ICU4 <-----------GT1      --------->GLK1(2)        --------->YAB1      <---------ICU4 <---------ANAC58  <-----------GT1 XXXXXXXXXXXX>MIR2937         <---------YAB1    <-----------GT1 <-----------GT1<---------DAG2   tattgaaaaatccgaaagaaatcgataatgctatgatcaaatcactcgattaaccattactgaatattacttgtcattgtacttttttacttgttattgt  2899700                                            --------->AtLEC2                                          <---------ANAC58                                          <---------ANAC58                                     <---------ICU4                    >>>>>>>>>ARR1    --------->ATHB12                  <---------YAB1     --------->YAB1                  --------->ICU4     <--------HAHB4               <---------MYB52(1)   --------->ICU4         --------->ATHB12           <---------ATHB12        <---------YAB1            --------->YAB1                   --------->KAN4(2)      <----------DOF2  <---------TOE1(3) >>>>>>>>>ARR2 --------->WOX13(1)     --------->TOE2(3)    ----------->HVH21   ---  <---------TOE2(3)--------->ATHB12 <---------YAB1       --------->YAB1     <---------At4g35610  ---- ->AGL15--------->ICU4  <---------YAB1    <---------ANAC46   --------->DAG2 --------->At4g35610 -----   acttaaggttatgattcgttatgattgtaattgtattaatcattacttgcaaacttcaaccataaggcttattctcgctggtgacaattcatctttgtca  2899800              --------->REM1(1)   <---------ZAT14                          <---------DAG2   --------->ZAT14                          <----------DOF2   --------->ZAT18                         <---------ANAC58   <---------ZAT18                         <---------ANAC58 ------>MYB46(3)      --------->ANAC46--------->ALFIN1                                         ------ ---->P     ------>ZmHOX2a(1)         <-----------RAV1(1)    ----------->GT1           ----------->GT1 ---->WOX13(1)<---------ALFIN1      <---------ANAC46       ----------->GT1        --------->AHL20(2)   accagtgcattgtcctacacttctacggccttctcatgctgtgttgcttttcgagtcgatgaagtgaaaaactcaaaaccaaaaaaaaatggaaaaaaaa  2899900  Previous    Next  AGI:  At1g09010.1    Description:  glycoside hydrolase family 2 protein. Identical to Mannosylglycoprotein endo-beta-mannosidase (EBM) [Arabidopsis Thaliana] (GB:Q75W54;GB:O04029); similar to endo-beta-mannosidase [Brassica oleracea] (GB:BAE97370.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82620.1); similar to glycosyl hydrolase [Gossypium hirsutum] (GB:AAO27794.1); contains InterPro domain Glycoside hydrolase, families 2 and 20, immunoglobulin-like beta-sandwich; (InterPro:IPR013812); contains InterPro domain Glycoside hydrolase family 2, immunoglobulin-like beta-sandwich; (InterPro:IPR006102); contains InterPro domain Glycoside hydrolase family 2, carbohydra Range:  from: 2895169    to: 2899387    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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