Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <---------ANAC58                                             --------->ALFIN1      <---------ANAC58                                           <---------bZIP60(2)    --------->ABI4(2)       --------->ANAC58                                           --------->O2           <-------TEIL            <----------ID1                                           <---------ANAC58    <------MYB83  ----------->GT1                                           <---------ANAC46    <---------DEAR3(2)         --------->ANAC58                                           <---------TGA1a     <---------ORA47(2)         --------->ANAC46                                           --------->TGA1a     <------MYB46(1)           --------->SPL7                                           <---------ANAC58   <---------DEAR3(1)       --------->ZAT14                                           <---------O2       <---------DEAR4(1)       --------->ZAT18                                        ----------->HVH21     <---------MYB46(3)     <---------------AtSPL8                 >>>>>>>>>ARR2        --------->ANAC58        <---------DREB2C(2)    <---------------AtSPL3                 >>>>>>>>>ARR1        --------->ANAC58 --------->ANAC58     --------->ALFIN1               <---------YAB1         --------->ANAC46 --------->ANAC58     <---------AtMYB61   gcgatgttacagagactacgattgtaactgggacttgaaaacgcgacgtgtgtatgcaagcgagtcggtgcatgcgagatggtggaaagtgtacgacaag  2890600                                                                                                   <-                                                                                                   --                                                                                            =========                       <---------TOE2(3)                                                    ---------               ----------->GT1   --------->YAB1                                             ------>ZmHOX2a(1)        --------->At4g35610    ------->TEIL                                  --------->At4g35610   --        <---------At4g35610   <---------CCA1(2)                  <------ZmHOX2a(1)        <---------LBD16       --------->GLK1(2)  <---------ANAC46                  --------->ALFIN1 <---------At4g35610  <--   atgcctaagaagctgaaaggttattgtggtttgaatcttaagatggagaagaacgttgagaagtggaggaaaatggctaagctcaatggttttcctgaaa  2890700                                     <---------HSFC1(2)                                   <---------ARR14(2)                                   --------->ARR14(2)                            <------ZmHOX2a(1)                          <---------TOE1(2)                         ------>ZmHOX2a(1)                        --------->TOE2(2)                       ------>ZmHOX2a(2)                      <------ZmHOX2a(2)                      =============HOX2a_HOX2a                     <---------ARR14(2)                     --------->ARR14(2) --------ICU4        <---------ARR11(3) ------>ATHB1        --------->ARR11(3) ============================HOX2a_HOX2a                                                      <------ >LBD16   --------->YAB1--------->TOE1(2)          --------->YAB1                            <------- ------->ATHB12     --------->RVE1(1)--------->HSFC1(2)                                      -------- -------YAB1     ---------->DOF2>>>>>>>>>TBF1   --------->WOX13(1)                           <-------   atcattggaaaattagaataaaagatcctaggaagaagaaccgtctaagtcaatgagaagagtcatcaaactcgcttattcaacaagagacttaattttt  2890800                --------->ARR11(3)         --------->ANAC55(2)         <---------ANAC46         --------->ANAC46       --------->AHL20(2)                                          <--------         <---------ANAC55(2)    <---------AHL20(2)                                         --------->AHL20(1)     <----------DOF2  ---------->DOF2                                                 --------->YAB1  <-----------GT1   <---------YAB1                                           --------->ANAC46 ---AHL20(2)    <---------GLK1(2)           --------->ANAC55(2)        --------->TOE2(3)   <---------AHL20(1) --AHL20(2)     <---------ARR11(3)          <---------ANAC55(2)----------->GT1       <---------YAB1 ->AHL20(2)   --------->ICU4   --------->AHL20(2)             <---------TOE2(3)   --------->ICU4 <--- --AHL20(1) ---------->DOF2    <---------AHL20(2)          <---------YAB1    --------->ANAC55(2) <---   tttttttctttacgtaaagattttgaaagggaatttaatttctaacaggtaattgtggattatgaaggaaaaacattatacgtagttatgatatatattt  2890900                                                                    --------->ANAC46                                                                    <---------ANAC58                                                                    --------->ANAC55(2)                                              --------------->AGL15 <---------ANAC58       <---------                                              <----------DOF2 --------->AHL20(2)         <-----------GT1       ---------->DOF2                   --------->YAB1       <---------AHL20(2)  ----------->GT1 -AHL20(2)                            <-----------GT1         --------->YAB1     --------->DAG2 ------ANAC58                         --------->YAB1       --------->YAB1       ---------->DOF2 ------ANAC58                      --------->YAB1         --------->ICU4  <---------AHL20(2)  <------   cgttcgagtgaaagtatttttagttttttacaaagactaataaccatacttttatttggaataataatatgcgtaatttaagtaaagtaattttctcttt  2891000                                                     <---------SPL7                                                     ------>NtERF2                                                     --------->ORA47(1)                                                     <---------RAP2.6(3)                                                    --------->DEAR3(1)                   <----------DOF2                  ----------->HVH21      --------->AHL20(2)                            --------->ETT(2)      <---------AHL20(2)                            <---------ETT(1)     <---------AHL20(1)                            --------->ORA47(2)     --------->AHL20(2)                            --------->DEAR3(2)     --------->AHL20(1) <-----------GT1  --------->ZAT6                               --------->ANAC58  --------->AHL20(2)    ---------->ID1  *TSS<----------DOF2              <---------ZAT6 --GT1<---------YAB1   <-----------GT1 <---------DOF5.7(2)      --------->YAB1        --------->ANAC58 ----DOF2       ------>NtERF2        --------->DOF5.7(2)      ------->TEIL  --------->MYB52(1)   tcaaaaatataatttcgatgccttttttccctctcactcgttaacacttttgtgccgaccgatgaatcaaaattagagtaacagtgaaacgcattcttcc  2891100                                  --------->MYB52(2)                                 --------->SPL7                                <---------MYB52(1)                             <------NtERF2          <---------ANAC58                            ------>NtERF2  <---------ANAC58                           --------->ARR14(2)       <---------ANAC58                           <---------ARR14(2)      --------------->AtSPL8                          <---------At4g35610      --------------->AtSPL3                           -                         <---------ATERF1(1)<---------TOE1(2)                  <------ZmHOX2a(1)  <--                        <---------DEAR3(1) <---------ANAC46        ------>NtERF2       ------>MYB83--                  --------->GLK1(1)        <---------ANAC58       --------->DEAR3(1)   ------>MYB46(1)                 <---------ARR11(3)      ------>ZmHOX2a(2)       <---------------------WRI1    ------                 --------->ARR11(3)      =======================HOX2a_HOX2a <---------LBD16   <------  <---------ATHB12<---------GLK1(1)  --------->ETT(2)    ------>ZmHOX2a(1)  <-----------RAV1(2)<-----   ctcaatcgttcaaatgcaagatttcttcggctccgttcgtcgatcgcttgttttccgtccttcttccgacgacgataaccaggagaaccagcctccgttt  2891200                                                                                 <---------At4g35610                                              <---------RVE1(1)               ----------->RAV1(2)   --------->ZAT14                --------->LBD16                            ------>ZmHOX2a(1) <---------MYB52(1)              --------->ANAC58                           <---------ALFIN1 -------->LBD16                  --------->ANAC58                         ------>ZmHOX2a(1) <-------- -------LBD16                    --------->ANAC46                        <---------ALFIN1   --------- ------->LBD16                  <---------LBD16                        ------>NtERF2  --------->ZAT6 --->ARR14(2)      <------ZmHOX2a(2)         <---------ARR11(3)        <---------ATERF1(1)<---------ZAT14 ---MYB52(1)      <---------ARR11(3)         --------->ARR11(3)       --------->DEAR3(1)  --------->ZAT14 ----ARR14(2)     --------->ARR11(3)         <---------GLK1(2) ------>ZmHOX2a(1)------>ZmHOX2a(1)   cccggtgttctcgccgataagatcacctcttgcatccgcaaatcgaagatttttatcaaaccctccttctcgcctcctcctcctgctaacactgtagaca  2891300                                                  <------MYB46(1)                                                  <------MYB83                                                 --------->MYB111(1)                                                 --------->MYB59                                                 --------->MYB46(2)                                              <----------DOF2                                             -------------->OsCBT                                             <------NtERF2                                            ------>NtERF2                                        ----                                           <---------ANAC46                                   -------                                          ------>NtERF2                                 --------->HSFB2a(1)                                          --------->ATERF1(1)                           --------->HSFC1(2)                                        <---------DEAR3(1)                              <---------At4g35610             <---------LBD16            <---------RAP2.3(2)                             <---------HSFB2a(1)            <---------ANAC58            --------->ATERF1(1)                             <---------HSFC1(2)   --------->TOE1(2)                    <------NtERF2                                   <---------ZAT2   --------->DEAR3(1)            <---------WOX13(1)<---------SPL7                  <---------LBD16 <-  --------->At4g35610         <---------AHL20(2) <---------MYB46(3)                <---------HSFB2a(2)  --------->ATERF1(1)      ----------->GT1<------NtERF2                            --------->LBD16---  <---------ZAT2        <-----------HVH21<---------ATERF1(1)                       --------->HSFB2a(2)  <---------At4g35610 --------->DAG2   <------NtERF2      <---------ZAT18         <---------ANAC46<-- ------>NtERF2     <------ZmHOX2a(1)   <---------LBD16 <---------ANAC46           <---------LBD16---- <---------ATERF1(1)---------->DOF2 <-----------HVH21--------->SPL7       <---------ICU4--------->At4g35610 -ETT(2)    <---------ANAC46 <---------MYB52(1) <---------MYB55(1)      ------->TEIL   ----------->ARR10 >ETT(2)    <---------ANAC58<-------GAMYB<---------RAP2.3(1)<---------REM1(2)    <---------LBD16-----   tggcacctccgatttcgtggaggaaaggtcagttaattggtcgcggcgcgtttggtacggtgtacatgggtatgaatcttgactccggggagcttctcgc  2891400                                                                                                <----      <---------ANAC55(2)                                                                  --------->ZAT18      --------->ANAC55(2)                                                                  --------->ZAT14      ----------->GT1                                                                    <-------MYC3 ----->DEAR3(1)                                                                       <---------ANAC46 -->ANAC46                              --------->ARR14(2)                  ------>MYB46(1)<---------ZAT14 -----NtERF2                   <---------WOX13(1)                           ------>MYB83 ------->MYC3 --->NtERF2                  --------->ATHB12                             <---------MYB59------->MYC2 ---------HVH21<---------TOE1(3)        <---------ARR14(2)           <---------WOX13(1)  <-------MYC2 ----->RAP2.3(3)            <---------YAB1     <---------At4g35610  <---------AtLEC2  <---------ANAC58 ---->RAP2.3(1)<---------TOE2(3)   <---------ANAC46               <---------YAB1      <---------ANAC58   cgtcaaacaggtaatttagggtttgtttttctgattgctgtggatttgaagctaattgggacttaattttgaatgacctaattctctggcatgtgtactg  2891500  Previous    Next  AGI:  At1g08990.1    Description:  PGSIP5 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 5); transferase, transferring glycosyl groups. similar to PGSIP4 (PLANT GLYCOGENIN-LIKE STARCH INITIATION PROTEIN 4), transferase, transferring glycosyl groups [Arabidopsis thaliana] (TAIR:AT1G54940.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81983.1); contains InterPro domain Glycosyl transferase, family 8; (InterPro:IPR002495) Range:  from: 2888756    to: 2890962    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g09000.1    Description:  ANP1 (NPK1-RELATED PROTEIN KINASE 1S); kinase. Identical to Mitogen-activated protein kinase kinase kinase ANP1 (ANP1) [Arabidopsis Thaliana] (GB:O22040;GB:O04030;GB:O22039;GB:Q8GZ05); similar to ANP2 (Arabidopsis NPK1-related protein kinase 2), kinase [Arabidopsis thaliana] (TAIR:AT1G54960.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO17625.1); contains InterPro domain Mitogen activated protein kinase kinase kinase 3 (InterPro:IPR015748); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase Range:  from: 2891040    to: 2895185    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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