Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       --------->YAB1                  --------->YAB1                       --------->AHL20(2)         <---------ANAC58                              --------->AHL20(1)      <---------GLK1(1)                    <---------YAB1--------->YAB1 ----------GT1  <---------YAB1            --------->TOE2(3) ---->YAB1   <---------YAB1    ---------->DOF2        --------->YAB1 ----------->GT1             ---- ---YAB1 <---------ANAC58    <---------YAB1<---------AHL20(2) <------ZmHOX2a(1)---------->DOF2<------   ttaactagatttcttgttattaatagtgattttgaaagttcaaatattaatgtcaaaaataataggagttattgtaaaaactaaagaaatattagatgtc  2886900                               --------->AHL20(2)                               <---------AHL20(2)            --------->YAB1                               <---------YAB1               <---------YAB1                              --------->TOE2(3)            --------->AHL20(1)                              --------->YAB1               <---------AHL20(2)                    --------->AHL20(2)                     --------->AHL20(2)                    <---------AHL20(2)                     <---------AHL20(1)               <---------ARR11(3)                        <---------YAB1               --------->ARR11(3)                      <---------CCA1(1)   <---------ARR11(3)      --------->YAB1             <---------ARR11(3)   --------->ARR11(3)   --------->YAB1                --------->ARR11(3)              <------ZmHOX2a(1) ------>DOF2  --------->YAB1<---------AHL20(2)   <---------ANAC46          --------->AHL20(2)       - -----HVH21---------->DOF2<---------YAB1    <---------YAB1--------->YAB1 <----------DOF2       ------   aaagaggtcttgtgaaagataattttttataatattaatagagtttatgtttcttagatattataatagttttagctttaaatatgtaggaatacttctt  2887000                                  -------->HAHB4                                  --------->YAB1                               --------->YAB1                              <---------YAB1                              --------->AHL20(2)                              <---------AHL20(2)               <---------TOE1(3)  <---------ICU4                                    <----------DOF2           --------->YAB1    <---------AHL20(1)                                  <---------AHL20(2)    <------ZmHOX2a(1)        --------->AHL20(1)                     --------->AHL20(2)   <----------ID1           --------->YAB1                         --------->AHL20(2) --------->DAG2<---------TOE2(3) <---------YAB1           --------->AHL20(2)     <-----------GT1    - --------->DOF2--------->DAG2--------->AHL20(2)        ----------->GT1   ----------->GT1        ----- --------->AGL15      ----------->GT1                 <---------YAB1<---------AHL20(2)         ------   caaaaaggactaaaaataaggttattgtaaatataattatagcatagtaagaatatatgattaaaaaaaaaaaatttgtaaatttacttttaaaacaaaa  2887100                                                                                 <---------YAB1                                                                                 <---------TOE2(3)                                                  --------------->AGL15        <---------AHL20(2)                                                  <---------------AGL15        --------->AHL20(2)                                                 <-----------------AGL2       --------->AHL20(2)                                                 ----------------->AGL3    --------->AHL20(2)                                                 <-----------------AGL3    <---------AHL20(2)                                      --------->ARR11(3)                  --------->AHL20(2)                   <---------WOX13(1) <---------ARR11(3)                  <---------AHL20(2)                <---------AHL20(2)   <---------CCA1(2)                    <---------AHL20(1) ---------->GT1 --------->AHL20(2)--------->AHL20(1)                  <---------AHL20(2) ---->DAG2      --------->AHL20(1)<---------ARR11(3)                  --------->AHL20(2) ---->DOF2     --------->AHL20(2) <---------AHL20(1)                 --------->AHL20(2)          ----   agttgtaaatttagaaaattaattgctaacttacaatatatatctatatttgctaaatttagagagttgtatttaataaaattaatattgttcagataaa  2887200                                        --------->CCA1(2)                                      --------->AHL20(2)              <---------ICU4      --------->AHL20(2)                          <-----------GT1      --        --------->YAB1  <---------ARR11(3)                              <---------AHL20(2)--------->TOE2(3) ----->YAB1  --------->ICU4----------->GT1   <------------CBF   ------------>CBF        *TSS      <--   cataaactgaacataattttgaccaagaactgtatataaaatatatgcattgaactcttcaaacttctcaatatttcatttttctaaaccattcttagtt  2887300                                                ----------->GT1                                             --------->YAB1                             --------->AHL20(2)                                          --------->YAB1                                <---------AHL20(2)                                         <---------YAB1                                 --------->AHL20(1)                                      <---------ARR14(2)                                <---------AHL20(1)                                    --------->LBD16                                  --------->YAB1                                  ------>ZmHOX2a(2)                                 <---------YAB1  <---------HSFC1(1)             <------ZmHOX2a(2)                                --------->YAB1  <---------HSFB2a(2)           <---------ARR14(2)                        --------->KAN4(2)  --------->HSFB2a(2)           ------->TEIL<---------YAB1    --------->YAB1     <---------YAB1 ------->ARR11(3)               --------->ARR14(2)    <-----------GT1  <---------MYB52(1) -------CCA1(2)       ----------->GT1 --------->ARR14(2)    <-----------HVH21  --------->YAB1     <--   atatctagaagaaactcaaaaacttagtaaaatggatccgaatatgatgatagtaaaaaccctatcagagaccgattgttctcatgataataaattgatt  2887400                                           <---------HSFB2a(2)          --------->DAG2                   --------->HSFB2a(2)                               ------>ZmHOX2a(1)          <---------TOE1(3)            --------->GLK1(1)                                    <--------          <---------TOE2(3)            <---------GLK1(1)                                   ----------        --------->CCA1(2)         --------->ANAC58                          --------->HSFB2a(2)   ---      --------->CCA1(2)           --------->ANAC58                          <---------HSFB2a(2)   <-- ---------GT1                    <---------LBD16                         --------->GLK1(2) ----------   ttaccaagagataaggttgagaacatagtaagaagcacgggagttccagtacctcgaatgggtattcaagtagaaattctagacaataccaattcctatt  2887500                                              <------NtERF2                                             <---------MYB46(3)                                            --------->ALFIN1                                          <---------ANAC58                                          <---------ANAC58                                         <---------MYB46(3)                                         <---------DEAR3(1)                                        --------->ALFIN1                                       <-------PIF5                                       ------->PIF5                                      --------->O2                                      ===============================================bZIP_DOF                                      <---------O2 <---------ARR11(3)                                      --------->TGA1a                         <-----------RAV1(2)                                      <---------bZIP60(2)              --------->TOE2(3)     --------->TOE2(3)                <---------ANAC58                 --------->TOE1(3)   --------->ARR11(3)                 <---------ANAC46               --------->ARR11(3)   <---------ARR11(3)                 <---------TGA1a               --------->GLK1(1) -YAB1      ====================================bZIP_DOF            <---------GLK1(1)<---------bZIP60(1) ------->AG ---------->DOF2   <---------AHL20(2)   --------->ARR11(3)<---------ARR11(3) -------->GT1          ----------->GT1<---------ANAC58           --------->ANAC58    --------->bZIP60(2) -------ANAC46    ==============================bZIP_DOF         --------->ANAC58    --------->bZIP60(1) ------->AGL1     ---------->DOF2  ----------->HVH21          <-------TEIL---------->DOF2    --------   gggtaaatcttagacaaagccaaagaggttattttatcggacgtgggtggggagaacttagagatgcaagaaatcttaaagcaggcgatgtcatcaagtt  2887600                                                <----------DOF2                                                <---------------AGL15                                                --------------->AGL15                                         <---------AHL20(2)                                         <---------AHL20(1)                                     <XXXXXXXXXXXXXXXXXXXXMIR1886.1                                    --------->AHL20(2)                        <-----------GT1  --------->AHL20(2)                  <---------AHL20(2)<---------AHL20(1)                  --------->AHL20(2)--------->AHL20(1)                                              <                --------->AHL20(2)  <---------AHL20(2) --------->LBD16                              -              ------>MYB46(1)      <---------AHL20(2) <---------LBD16                      <---------AHL20(2)              ------>MYB83         --------->AHL20(2)<---------LBD16                 --------->TOE2(3) --->GT1    <---------MYB59    <---------AHL20(2)   <---------At5g28300            <---------ARR11(3)   atattggcaaaataccaaatttatattttctatgtaattttattttatttcttttaccgggaatgttatcttacattcaattcaatttcttaataaatct  2887700                          --------->ARR11(3)                          <---------ARR11(3)                         <---------CCA1(2)                       <---------AHL20(2)                       --------->AHL20(2)                       --------->YAB1                      <---------YAB1                    <--------HAHB4                    --------->ATHB51                    -------->HAHB4                    <--------ATHB1                    <---------ICU4                    --------->YAB1                                                          <--------                   --------->AHL20(2)                                                       <--------                   <---------YAB1                                                       <---------TOE2(3)                   --------->ICU4                                                    <---------AHL20(2) <-----------GT1 --------->YAB1    <------MYB83           --------->DAG2             <---------ATHB51 ---------AHL20(2) <---------ATHB12----------->GT1       ---------->DOF2       <---------At4g35610 -------->AHL20(2) <---------ATHB51<------MYB46(1) --------->AtLEC2            --------->At4g35610   atttaactaatcttttgtctaataattatatcttggatggttttatatgtttcatacaaaaaagttgcatttcaatttgtcatctaaattatggatattt  2887800  Previous    Next  AGI:  At1g08985.1    Description:  DNA binding. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G21920.1); contains InterPro domain Transcriptional factor B3; (InterPro:IPR003340) Range:  from: 2887288    to: 2887709    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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