Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <------MYB46(1)                          -------->HAHB4                ----------->GT1                          --------->YAB1            --------->ATHB12                             <---------ICU4       <---------AHL20(2)                             --------->YAB1     <XXXXXXXXXXXXXXXXXXXXMIR849               <---------AHL20(2)    <---------ARR14(2)                        --------->AHL20(2)    --------->ARR14(2)                        <---------AHL20(2) ------->GAMYB  <------MYB83              <---------YAB1<---------ATHB51            <---------AHL20(2) --------At5g28300                      <----------DOF2 --------->ICU4 <-----------GT1 ---------GT1  --------->MYB59--------->ARR14(2)   --------->YAB1<---------YAB1    --------->AHL20(2) ---DOF2  <---------TOE2(3)   <---------ARR14(2)   ----------->GT1--------->YAB1<------ZmHOX2a(1) ---   taaccgtatattaatgtttggttaaataagcgttttctctcactttgattaaatagtaataatggctatgattttacctataggatttaatatttgaaaa  2855800                                                                                   --------->ANAC58                                                                                   --------->ANAC58                                                                               --------->ANAC58                                                                 <---------At4g35610                                                                 --------->At4g35610                                                           --------->MYB52(1)  --------->ANAC58                                                       <---------TOE1(3)     <-----------RAV1(2)                                                      <---------DOF5.7(2) --------->ATERF1(1)                     --------->ATHB12                 ---------->DOF2     <------NtERF2 <---------TOE2(3)                    <---------YAB1                  --------->DOF5.7(2)  <-----------HVH21                  <---------ICU4                   --------->TOE2(3)     <---------ATERF1(1)          <---------At4g35610                      --------->TOE1(3)    --------->RAP2.3(2)          --------->At4g35610                    <---------TOE2(3)     --------->DEAR3(2)        <---------ZAT18      ----------->HVH21  <---------DOF5.7(2)   --------->At4g35610 -------->GT1     --------->YAB1        ---------->DOF2<---------TOE2(3)--------->DEAR3(1)   ctgtgatttgtgagctctaatcttgattagagtgacacatattaaagtgtaaacgttaaagtaagggagatgagccgtcgcaggcaggctaatgtagaga  2855900                          --------->ICU4                       <---------YAB1                      <---------AHL20(2)                 <---------AHL20(2)                 --------->AHL20(2)              --------->ATHB12             <---------YAB1             --------->ICU4     <------------CBF    <----------DOF2          <----------DOF2          <---------MYB52(1) <---------YAB1  <---------ICU4           <---------ICU4           <-----  <---------TOE2(3)   --------->AHL20(2)    <---------YAB1           <---------YAB1           <------  <---------TOE1(3)  <---------AHL20(2)   --------->YAB1           --------->YAB1           --------- <---------DOF5.7(2) --------->AHL20(2)  <---------ATHB12         <---------ATHB12         <---------ATHB12 <-----------GT1<---------WOX13(1)     --------->WOX13(1)       --------->WOX13(1)       --------->WOX13(1) --------->MYB52(1)  --------->YAB1  ------------>CBF         ------------>CBF         ------------>CBF   gattaacgttctgttatgattaattaaaattatgaattgtccaatcataaatgcctttaacttgtccaatcataaatgcctttaacttgtccaatcataa  2856000                                                                                          <------ZmHOX2a(1)     ----------->RAV1(1)                                                          --------->GLK1(2)    --------->REM1(1)                     --------->ZAT14                         <---------ARR14(2) ----ICU4                       --------->YAB1   ---------->DOF2  ----------->GT1 --------->ARR14(2) ---YAB1                 ---------->DOF2  <---------ZAT14   <---------ZAT18      <---------GLK1(2) >YAB1           --------->ALFIN1  ---------->DOF2          --------->ZAT18   --------->YAB1      ---   atgcctacaacaaaaacgagtgggagaaaaagaatcaaaaagactacagtagaaagtagaaggggacttagtaaaaactatcagaatctgaaggaccgag  2856100                                                                                       --------->YAB1                                                                                       <---------ICU4                                                                                    --------->YAB1                                                                                   <---------YAB1  --                                                                             <---------MYB46(3)    --                                                                             <------MYB83  <---------ARR11(3)                                           --------->ANAC58                  <---------DEAR3(2)    --                                           --------->ANAC46                 <---------DEAR3(1)    <--                    <---------At4g35610 <------NtERF2                   <---------MYB46(3)<---------ICU4                    --------->At4g35610------>NtERF2                   --------->ALFIN1<--------HAHB4                  <---------ZAT14     <----------ID1                 <---------ANAC46 <---------YAB1                  --------->ZAT14  --------->DAG2                    <---------ANAC58 <---------ATHB12               --------->ANAC58  ---------->DOF2          --------->At4g35610<------MYB46(1)      ---      ---------->DOF2        --------->YAB1--------->ANAC58<---------DEAR3(1)----------->GT1     <--- -------->GT1  --------->ANAC58----------->TBP      ---------->DOF2  <---------ANAC58 --------->ICU4-   ttgtaaaataaagaaacaagtaaactgccaagtataaaaggcgacaagctactctcaagcggctgtgtttgtcgtgggtcggtttataatcattatctcc  2856200          <---------LBD16                     <---------HSFB2a(2)          --------->HSFB2a(2)           <---------ATERF1(1)                           <---------At4g35610          <---------HSFB2a(2)           ------>NtERF2                                 --------->At4g35610 ------->HSFB2a(2)                     --------->DEAR3(1)                             <---------ZAT2 ------->ANAC46                      --------->LBD16                             --------->ANAC58 ------->LBD16                       ------>NtERF2                               --------->ANAC58---- -------LBD16                      <---------LBD16       <-----------GT1         --------->ANAC46---- ------>LBD16                   --------->KAN4(2)<---------ARR11(3)             --------->WOX13(1) ------LBD16                ----------->GT1   --------->HSFB2a(2)            --------->ARR11(3) <---- -------->LBD16    <------ZmHOX2a(1)<---------LBD16 <----------DOF2   <---------AtLEC2--------->ZAT2   cccggaaaacttctcggagaaggagaagaatggttattccggcgacttctaggtctttttttcttctcatttgcataaatatcaagcaagctgtctctat  2856300    <---------YAB1                         --------->AHL20(2)  >>>>>>>>>>WRKY63                         --------->AHL20(1) ----->YAB1                                <---------AHL20(2)                       <-------TEIL ----->ATHB12                             --------->AHL20(2)             <---------AHL20(2) -----ATHB12                  --------->ANAC55(2)           --------->YAB1 <---------AHL20(2)      <<   catttgactattgattttcttacttagtttttaagtaatatcaaattaattgtttaatacagttatagtttctatataaaaatgggttcaactaaacatt  2856400                   <------MYB46(1)                   <------MYB83                <---------MYB52(1)               <---------At4g35610          <---------ANAC58          <---------ANAC46          <---------ANAC58                                                                 --------->RVE1(1)          --------->ANAC55(2)                                                             <---------ARR11(3)          <---------ANAC55(1)                                                             --------->GLK1(2)          <---------ANAC55(2) <---------ANAC58                        <---------CCA1(2)   --------->ARR11(3)        <-----------GT1       <---------ANAC58                        <---------At4g35610--------->CCA1(1)    <---------YAB1<---------TOE1(2)                                  ------->TEIL ----------->GT1<--- <<<<<<<TBF1   <---------ZAT2 <---------ANAC46                    ------>ZmHOX2a(1)      --------->RVE1(1)   cttcttctaattacgtctgctaggtttgggtttcgtgctgaattcaacaccaaggagtttcaagcttcctgcatctctctcgctaagtaaaaaatctctc  2856500                                                                                              <------MYB46(1)                                                                                          --------->ARR14(2)                                     --------->AHL20(2)                                   <---------ARR14(2)          <---------MYB52(1)    --------->TOE2(3)                                      --------->LBD16         --------->LBD16        --------->TOE1(3)                                      ------>ZmHOX2a(1)         <-------GAMYB          <---------MYB59    <---------LBD16                    <---------LBD16        <---------ANAC46     <-----------GT1<----------DOF2                    <----------DOF2<------MYB83 -------DOF2         <----------DOF2 <---------AHL20(2)            <----------DOF2   ----------->RAV1(2)   ttttaagtttccgttgaattcatctttgttttaacctaaaaaaattctttatttctgggtttcttcgagcttcactgaaaactttactcctggatttggt  2856600                                               <---------KAN4(1)                                               --------->KAN4(1)                                              ---------->TaMYB80                                              <---------KAN4(2)              --------->ICU4                                          --------->ANAC46                  <---------TOE2(3)                                          --------->LBD16                  <---------ICU4                                         <---------LBD16  --------->ZAT18  --------->YAB1           -                                         --------->LBD16--------->ZAT2------>ZmHOX2a(1)           <--   <---------ANAC46                     <-----------RAV1(2)          --------->TOE2(3)   <---------AHL20(2)   ----------->GT1  <----------DOF2     <---------LBD16<---------ARR11(3) <---------ATHB12        <-- --------->ZAT14<---------ANAC46        <---------HSFB2a(2)   <----------DOF2<---------YAB1       <-- <---------ZAT14<---------RAP2.6(2)  <---------ARR14(2)--------->ARR11(3) <---------ATHB51 <---------AHL20(2)   gaatgcagtgaaatcgatgcggctattgggagaaatgaagttccagggaatattcaagagctcgctttaatcctcaataatgtttgtttatatttttttg  2856700  Previous    Next  AGI:  At1g08900.1    Description:  carbohydrate transmembrane transporter. Identical to Sugar transporter ERD6-like 2 (SUGTL3) [Arabidopsis Thaliana] (GB:Q4F7G0;GB:O04040;GB:Q94F32;GB:Q9SCW8); similar to sugar transporter family protein [Arabidopsis thaliana] (TAIR:AT1G08890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO68582.1); contains InterPro domain General substrate transporter; (InterPro:IPR005828); contains InterPro domain Major facilitator superfamily; (InterPro:IPR007114); contains InterPro domain Sugar transporter, conserved site; (InterPro:IPR005829); contains InterPro domain MFS general substrate transporter (InterPro:IPR016196); contains InterPr Range:  from: 2852457    to: 2855782    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g08910.1    Description:  EMB3001 (EMBRYO DEFECTIVE 3001); zinc ion binding. similar to zinc ion binding [Arabidopsis thaliana] (TAIR:AT5G41580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65899.1); contains InterPro domain Zinc finger, MIZ-type; (InterPro:IPR004181) Range:  from: 2856230    to: 2861173    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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