Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->At4g35610                                                       --------->ZAT2                                                       <---------ZAT2                                                       <---------At4g35610                                                      ------>NtERF2                                                   --------->LBD16                                                   ------>NtERF2                                                   <-----------HVH21                                                  --------->ANAC58                                                  --------->ANAC46                                                  --------->ANAC58                  <---------ANAC55(1)            <---------LBD16                  <---------ANAC58            <---------ARR14(2)      <---------ANAC46                        --------->ARR14(2)    <---------ATHB12      <---------ANAC58                     <---------ANAC58        ------>MYB46(1)             <-----      <---------ANAC58         <xxxxxxxxxxxxxxxxxsmallRNA(se3)     ------>MYB83     --------->YAB1 --->ZAT2         <---------ANAC58         <---------ANAC58   <---------ALFIN1     <---------ATHB12 ----ZAT2         >>>>>>>>>>AtMYC2         <---------ANAC46 ----------->RAV1(1)  ------>MYB46(1) --->At4g35610    <---------ANAC55(2)  --------->ZAT2 <---------ATERF1(1)------->GAMYB         ------ ----At4g35610    --------->ANAC55(2)  <---------ZAT2<---------ALFIN1  -------->P------>MYB83 <------   tgaatgtgtcttggtactatacgtgtcttcttgttatcccttgctgcgtttcccgccagctccaacacctatcaacccaaaccaaatcaaaatcaaatca  2847400                                                                             --------->DEAR3(1)                                                                             <---------ANAC46                                                                            --------->ATERF1(1)                                                                            <------NtERF2                                                                           ------>NtERF2                                                                           <---------DEAR4(2)                                                                           <---------ATERF1(1)                                                                           <---------RAP2.3(1)                                                                           <---------ERF1                                                                          --------->ATERF1(2)                                                                          <---------RAP2.3(3)                                                                          --------->DEAR3(1)                                                                          <---------ATERF1(2)                                                                          <---------RAP2.3(2)                                                                          <---------DEAR3(1)                                                                         <---------ABI4(1)                                                                         <------NtERF2                                                              --------->AHL20(1)     --------->CCA1(2)                                        <---------AHL20(2)     <------ZmHOX2a(2)                                        --------->AHL20(2)    <---------ARR11(3)                                        <---------AHL20(1)    --------->ARR14(2)                                       <---------AHL20(2)    --------->ARR11(3)  ------>MYB83                         --------->AHL20(2)    <---------ARR14(2)  ------>MYB46(1)               ----------->GT1    --------->ATERF1(1)  -------    --------->AGP1    <---------MYB59            <----------ARF1  <-----------GT1      <---------HSFB2a(2) ----ICU4     --------->At4g35610         ------>MYB46(1)>>>>>>>>>>GT-3b<---------ATERF1(1)   <------ --------->AtSPL3 ----------->HVH21       ------>MYB83--------->ANAC58 ---------->CDC5 --------->HSFB2a(2) ---ATHB12    <---------At4g35610     >>>>>>>>>MYB2   --------->ANAC58 <---------DEAR3(1)     <------   gtacaagatccaattcagatgtgaccaaatcgaaattgaaaaccaaattggaagacaagaaaaataaattacctcggcggcgaggtactcgagaacagcg  2847500                      ----------->HVH21                      --------->DEAR3(1)                      --------->At1g77200                      <---------ETT(1)                      --------->DEAR4(1)                     --------->DEAR3(2)                     <------NtERF2                    ------>NtERF2                    <---------ATERF1(1)                   --------->DEAR3(1)                   <---------ALFIN1                 <-----------HVH21                 ------>NtERF2                 <---------ATERF1(1)                 --------->LBD16                --------->ANAC46          <---------LBD16            --------->GLK1(1)           <-----------GT1            <---------GLK1(1)        <---------ARR14(2)          --------->HSFC1(2)            --------->ZAT2 --------->ANAC58   <---------ARR14(2) --------->HSFB2a(1)            <---------ZAT2 --------->ANAC58 --------->LBD16     <---------ARR14(2)            <---------At4g35610      --------->ARR14(2)--------->GLK1(2)            --------->At4g35610   <---------ANAC46   <------ZmHOX2a(1)   <---------ANAC46       <---------LBD16--------->DREB2C(2)<---------At5g28300    --------->GLK1(2) -->At4g35610   <---------ETT(1) <------NtERF2--------->ARR14(2)--------->ARR14(2) ---LBD16--------->LBD16 <---------ALFIN1--------->MYB52(1)    <---------GLK1(2)                <---- ---At4g35610  <---------LBD16 <---------DEAR3(1)  <---------TOE2(3)  ----------->HVH21     <--------   gagagatagaccggagctccggcaccgacacgctcggcgtatttaccggatttgaggaatctagcgattcttccgacggggaattgaagaccggctttag  2847600                                                 <---------MYB46(3)                                               <-------GAMYB                             <---------GLK1(1) <---------ANAC58                             <----------DOF2   <---------ANAC58                       <----------DOF2     --------------------->WRI1                     <---------ANAC46      <----------DOF2                  <---------RAP2.6(2)     <---------DAG2            <---------ZAT14                <------MYB46(1)         ------>NtERF2               --------->ZAT14                <------MYB83<---------ANAC58  <---------MYB46(3) ----------->RAV1(2)               --------->MYB111(1)     <---------ALFIN1          --------------------->WRI1            <---------ARR14(2)       ------>NtERF2           ------>ZmHOX2a(1)            --------->ARR14(2)    <---------At4g35610      ----------->RAV1(2)  ------>ZmHOX2a(2) <------NtERF2 --------->At4g35610  --------->At4g35610 -----At4g35610<---------AtMYB61  ------>ZmHOX2a(1)    <---------At4g35610 --DOF2--------->CCA1(2)    <---------ANAC58 <---------AtMYB61  ------>NtERF2                     ---   atgatcgagagacggatttggtggcctttggctttcctctgccacctttggttgttccgcttcctgcgcctgtactcatcgtcttcttcgaaatttagaa  2847700                                                           --------->LBD16            <---------TOE2(3)                                                       <---------ARR11(3)             <---------TOE1(3)                                                       --------->ARR11(3)         <----------DOF2                                                   <---------At4g35610        --------->ZAT18 --------->CCA1(2)                         <---------YAB1------>ZmHOX2a(2)    <---------ZAT18 -------->GT1                           --------->ICU4 <---------ARR14(2) --------->ATHB12   cagataaacgatttgatgagagtttgaagaaatcgaagagaaatgactattgtagatgatctgggaattgagaagatgagtgggctttagggttttgctc  2847800                                                                   --------->ALFIN1                                                                  <-------MYC3                                                                 ========================MYC_MYB                                                                 ==============================bZIP_DOF                                                                 --------->TGA1a                                                                 <---------TGA1a                                                                 <---------O2                                                                 --------->O2             <---------ATHB51                                                          --------->GLK1(1)               <---------ATHB12                                                         --------->ARR14(2)           ------------>CBF                                                         <------------CBF <------ZmHOX2a(2)     -----                          <------------CBF            --------->ANAC46   <---------ARR14(2)  <-------                          <---------ANAC58            --------->ANAC55(2)<---------ARR11(3)<--------HAHB4                          <---------ANAC58            --------->ANAC58   --------->ARR14(2)--------->YAB1                         --------->ATHB12             --------->ANAC55(1)--------->ARR11(3)-------->ATHB1                       <---------WOX13(1)             --------->ANAC58  --------->At4g35610--------->ATHB51                      <------------CBF               <---------LBD16    <---------At4g35610<---------ICU4                    <---------YAB1         ================================bZIP_DOF <----------DOF2 -                    <---------TOE2(3)      <----------DOF2<---------WOX13(1) --------->At4g35610<----   *TSS     --------->ANAC46  <---------YAB1     <------ZmHOX2a(2)------->MYC3  -------->P--------->ICU4   ttctctatatgtataggctactaagattgattgtgatttgttagactttagatcacacggattgccaacgtggcagatcatctaccctttcaattattat  2847900              --------->REM1(1)          <---------ANAC58                                                              <----------DOF2          <---------ANAC58                                                           <---------TOE2(3)         --------------->AtSPL3                                                      <---------TOE1(3)         <---------------AtSPL3                      ----------->GT1                <-----------GT1         <-------TEIL                               --------->DAG2              <---------ICU4  ------>ZmHOX2a(2)        <----------DOF2         ---------->DOF2              --------->ATHB51 ---->ANAC55(2)            <---------DAG2       --------->ANAC58                <--------HAHB4 --YAB1  --------------->AtSPL8                 --------->ANAC58               <---------YAB1 -------->ARR11(3)      <-----------GT1       --------->MYB52(1)               --------->ICU4 -----ANAC55(2)      <----------DOF2   <---------------AtSPL8              ------>ZmHOX2a(1)   ------   gtgatctatggttcgtacatctccttttactttttgaaaataatgtacaaacgaaaagtgattttagtgaaatagtcctccattattaagctttctataa  2848000                   ----------->GT1                  ------>ZmHOX2a(2)                                                              ----                <---------AGP1                                            >>>>>>>>>>>>>>>>>LFY <-----                <---------ARR11(3)                                <---------WOX13(1)     <-------GAMYB            --------->YAB1                    --------->TOE2(3)  >>>>>>>>>GATA-2        ----------->GT1          ------->TEIL                --------->AHL20(2)         >>>>>>>>>GATA-4        <---------MYB46(3)         <---------GLK1(2)            <---------AHL20(2)         >>>>>>>>>GATA-3    --------->ICU4 --->YAB1<---------CCA1(2)   <-------TEIL  <-----------GT1       >>>>>>>>>GATA-1 <XXXXXXXXXXXXXXXXXXX   ttttagaccctgaatcttgatctgttacaagttcatatttttaatttacatcaatacatttattgtggattgatcatcccaatgtattgatggttattta  2848100                                                                                              -------                                                                                      <---------AHL20(2)                                                                                      --------->ATHB51                                                                  --------->ANAC46    --------->AHL20(2)                                                         --------->ATHB12             <--------ATHB1                                                       <----------DOF2           <---------ATHB12                                                      --------->TOE1(3)        --------->WOX13(1)  <-                                                      --------->TOE2(3)       <---------AHL20(2)   --                                                   <-----------GT1--------->ANAC58    <---------ICU4      <-----------RAV1(2)                       <---------bZIP60(1)        --------->YAB1   <-------- ------>DOF2                                    --------->TGA2(1) --------->ANAC58   <---------ATHB12 ----AHL20(2)   ------>ZmHOX2a(2)               <---------REM1(1)--------->WOX13(1)  <---------ATHB51 XMIR827   <--------P          <---------YAB1   --------->bZIP60(1)  ----------->RAV1(1) <---------AHL20(2)   aaagatggccagggttgatcgattcggtttcatatgattttagttctatgatgtaacctttattgatcaagcaacaagaataaatcaataatttatacga  2848200                                               --------->ARR11(3)                                               <---------ARR11(3)  ------>NtERF2              --------------->AGL15  ----------->RAV1(1)        <---------------AGL15  <---------RAP2.6(3)       ----------------->AGL3  <---------DDF1            ----------------->AGL2 --------->DEAR3(1)         <-----------------AGL2 --------->ANAC46           <-----------------AGL3                                  <-----------HVH21 --------->RAP2.6(2)      <-----------GT1     --------->CCA1(1)                  <---------ATHB12 -->ANAC46    --------->GLK1(1)        <---------WRKY38(1) <---------MYB46(3)------------>CBF --------At4g35610    --------->ARR11(3)      --------->RVE1(1)           --------->ANAC58          - ------->At4g35610   --------->YAB1   <<<<<<<<<WRKY6 --------->YAB1       --------->ANAC58          - ---GT1---------->DOF2<---------ARR11(3)  --------->MYB46(3)         ----------->HVH21 <---------At5g28300   tagccgacataaagagatttctattatcttactatatatagtcaacaaatatctataacagttgttcacatgggacacgaccaatgagtcactgccaaat  2848300  Previous    Next  AGI:  At1g08880.1    Description:  G-H2AX/GAMMA-H2AX/H2AXA/HTA5; DNA binding. Identical to Probable histone H2AXa [Arabidopsis Thaliana] (GB:O04848;GB:Q8LAC0); similar to G-H2AX/GAMMA-H2AX/H2AXB/HTA3, DNA binding [Arabidopsis thaliana] (TAIR:AT1G54690.1); similar to Histone H2A; Histone-fold [Medicago truncatula] (GB:ABN08174.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H2A; (InterPro:IPR002119) Range:  from: 2846952    to: 2847803    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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