Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           ----------->RAV1(1)                        --------->DEAR4(1)                        --------->DREB2C(2)                        --------->At1g77200                        ------->GAMYB                        ----------->HVH21                       --------->SPL7                       --------->MYB46(3)                       --------->DEAR3(2)                              --------->ARR14(2)                    ----------->HVH21                                  <---------ARR14(2)                   --------->DEAR3(2)            <----------DOF2      ------>MYB46(1)                   ------>ZmHOX2a(2)         ------->GAMYB            ------>MYB83                  <------ZmHOX2a(2)          <---------ZAT18      >>>>>>>>>MYB2                 --------->ARR14(2)      <---------WRKY45     <------NtERF2                  -------- ----->ZAT18     <---------ARR14(2)      <---------WRKY38(1) --------->LBD16  ======================= ------ZAT18  <---------At4g35610--------->AHL20(2)         --------->RAP2.6(2)  ---------->ARF1    < --->DOF2     --------->At4g35610<---------AHL20(2)        <---------LBD16    ------>ZmHOX2a(1)------   gcgctcgttttttctcagcgatccgaccgacacaattttttgggcaacgcgctttcgactagccggaaaaccaaatcgtcctagtcccccagtgtgatct  2824900        --------->AtMYB61        <---------ALFIN1       --------->MYB46(3)                                                            <--------P      ------>NtERF2                                                                 <---------MYB52(1)      ----------->RAV1(1)                                                          --------->LBD16     --------->DEAR3(1)                                                          ------>ZmHOX2a(2)  --------->ANAC46                                                              <------ZmHOX2a(2)  <---------bZIP60(1)                                                     ==============HOX2a_HOX2a  --------->ANAC58                                              ========================HOX2a_HOX2a  <---------ANAC55(2)                                           <------ZmHOX2a(1)<---------LBD16  --------->ANAC55(2)                                           =======================HOX2a_HOX2a  --------->bZIP60(1)     <---------AHL20(2)                <---------TOE1(1)  --------->ARR14(2)  --------->ANAC58        --------->AHL20(2)            --------->DOF5.7(2)<---------LBD16      ----- ->ARR11(3) --------->ANAC58                          <---------ANAC46    ------>ZmHOX2a(1)     <---- =HOX2a_HOX2a         <---------ZAT6                ------>NtERF2         <---------LBD16    -------- -----------GT1 ----------->HVH21 --------->DAG2   --------->DEAR3(1)     =============HOX2a_HOX2a >ZmHOX2a(2)--------->ANAC58    ---------->DOF2   <---------------------WRI1   <---------ARR14(2)   agttacgccaccacaggcctgatagtattaaaacaaaagggcgaaataaaacgacgacgtttacgaggagcgactcctcgggatccggtagccaatagta  2825000                    --------->LBD16                   <---------HSFB2a(2)                   --------->HSFB2a(2)               ------>ZmHOX2a(2)              <------ZmHOX2a(2)             <---------AGP1             <---------ARR14(2)             <-----------ARR10             --------->ARR11(3)             --------->ARR14(2)             <---------ARR11(3)     <------ZmHOX2a(2)                                  ---------->DOF2   --------->At4g35610                              --------->GLK1(2)                   <---------ARR14(2)   <---------At4g35610                             <---------GLK1(2)                   <------ZmHOX2a(1) ---->ZAT14  --------->AGP1                        --------->ARR14(2)            <------ZmHOX2a(1) -----ZAT18 <---------CCA1(2)                      <---------ARR14(2)   --------->ARR14(2) ->YAB1    ----------->ARR10                ---------->DOF2            <------ZmHOX2a(1)--------->ARR14(2)   aactcagatcacatagatcttcccgagccctagcgatttcgatttctaaagcagattctaaagacaaaaatcaggaaactcgaggaagaggaacctagtt  2825100                                                                                                  <--                                                                                                  <--                                                                                                 <---                                                                                         ------->GAMYB                                                                                        --------->ANAC46                                                                                        --------->ANAC58                                                                           ------>NtERF2--------->ANAC58                                                                          --------->DEAR3(1)     ----                                          --------->YAB1                  ----------->HVH21--------->MYB52(1)                                         --------->ICU4      --------->TOE2(3)        --------->MYB52(1)                                <---------WRKY38(1)          --------->TOE1(3)      <---------MYB52(2)   tcgaaacaaaaacaaaaaccagagaagaagatgatcaacgagaatgatgaaatcggaaggaaaccttaccgtctctccgacgaagaactaacggaacgga  2825200          <----------ID1   <------ZmHOX2a(2)  --------->ZAT18 -------ANAC58            <xxxxxxxxxxxxxxxxsmallRNA(s)               ----------------->AGL1 -------ANAC58         --------->At4g35610   ----------->GT1         ----------------->AGL2 ------ZAT2         --------->At4g35610  <---------ZAT14  --------->TOE2(3)              <---------TOE2(3) ----->ZAT2      ---------->DOF2  ---------->DOF2         --------->YAB1      *TSS----------->GT1   gcttgagattgagcgacgaagaagcagcgatcgagagaaagagagaagtgcaaaaactaatcttagtgaaggccaagtatggaaatgtattaatgtgttc  2825300                                                                            ---------->DOF2                                                                           ------>MYB83                                                                           ------>MYB46(1)                                                                           --------->MYB52(1)                                                                          --------->MYB55(1)                                                                         <---------MYB46(2)                                                                         <---------MYB52(2)                                                                         <---------MYB111(1)                                                                         <---------MYB59                                                                    <---------REM1(1)                                                              --------->ARR14(2)                                                              <---------ARR14(2)                                                              --------->GLK1(2)                                                              <---------ARR11(3)                 <---------AHL20(2)                           --------->ARR11(3)         <------------CBF          <---------------AtSPL8    <---------GLK1(1)       <---------YAB1         --------->DAG2           ----------->GT1 ------->TEIL      <---------ZAT14      --------->AHL20(2)     ---------->DOF2   <-------TEIL  --------->RVE1(1)------->GAMYB    <-----      <---------AHL20(2) <---------TOE2(3)    --------->GLK1(2)  <-----------RAV1(1)     --------->ZAT14   aaacacattaaaattgaatttttttttaagaaaaagtatggtactgagattcagagatggtgaatatctgttgtacctaacagcaatttagtaaactata  2825400                                     --------->YAB1                                    <---------YAB1                                            -------                                    <---------TOE2(3)                                        --------                                  --------->YAB1                                          --------->AHL20(2)                                  --------->ATHB51                            --------->At4g35610                                 --------->ICU4   --------->AHL20(2)          <---------At4g35610  ----------->HVH21   <----------DOF2----------->GT1    <---------ANAC55(2)  --------->MYB52(2) <---- ----YAB1     <-----------GT1 --------->ICU4      <---------AHL20(2)       <---------MYB52(1)<-------   atttctgacgactatttttcgatacttttgtaacaattatcgtaaaaaacaaaaaattaagtgagattacattcgacgttagatgccagaaataatatat  2825500                            <----------DOF2                    <----------DOF2                   <---------DAG2        <---------YAB1    ---------->ID1      ----------->GT1    <-----------GT1                                --------->ANAC55(2)  <---------YAB1 ------->TEIL                                         --------->ANAC46              < -->AHL20(2) --------------->AtSPL8                ------->TEIL       --------->ANAC58         ------ ->AHL20(1)  <---------------AtSPL8             <---------YAB1 <------ZmHOX2a(1)<---------YAB1 ------ -----AHL20(2)  <-----------GT1          ----------->GT1       =================================HOX2a_HOX2a --AHL20(1)  <---------------AtSPL3  <---------ATHB12  <----------DOF2--------->ANAC58   <------ZmHOX2a(2)   atatgtgattgtgaatatgtacctttttttcttttttcaatgagtgtaatatgaatgctttgagaggattacacgcgtgattctgattcggatcaccaac  2825600                                                                                               ------                              <----------DOF2                                              ------>ZmHOX2a(1)                    <---------ANAC58                                                       <---------YAB1                    <---------ANAC58                                               <---------ANAC55(2)              <---------AHL20(2)       ---------->ID1                              --------->ANAC46              --------->AHL20(2)    <----------DOF2                                --------->ANAC58     <---------ANAC58     <---------CCA1(2)     <---------CCA1(2)                  --------->ANAC55(1)     <---------ANAC58<----------DOF2<---------DAG2                ---------->DOF2  --------->ANAC58 ----------DOF2   <-----------GT1  <---------ANAC58              ---------->DOF2   --------->ANAC55(2) >MYB83      --------->AHL20(2)    <---------ANAC58       <----------DOF2  --------->CCA1(2)<-------- >MYB46(1) <----------DOF2------>ZmHOX2a(1)     <---------At4g35610     ----------->ARR10--------->YAB1   ttcttttgcttcccttttaatttctttcctatcttttgcttttcccattcatctctctcgctttccacaaaggcgagatttgaatacgtaatcctaatta  2825700                                --------->ARR11(3)              <------MYB83      <---------AHL20(1)              <------MYB46(1)   <---------ARR11(3)              ----------->GT1   --------->AHL20(1)                        --------->TOE2(3)  <---------YAB1       ---------->ID1     <----------DOF2                 --------->YAB1           -- --->YAB1    --------->MYB59   --------->RVE1(1)                    --------->YAB1           -------- -ICU4     --------->CCA1(2)   --------->CCA1(1)          <-------TEIL  <---------ARR11(3)   <-------   tactctcatagagatttggtaatttggcccaaaatatctttctactttgtaatatgtcgatgcatagaaaacataatcttattctaacattcacaaatct  2825800  Previous    Next  AGI:  At1g08820.1    Description:  VAP27-2 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-2); structural molecule. similar to VAP27-1 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1), protein binding [Arabidopsis thaliana] (TAIR:AT3G60600.1); similar to VAP27-1 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1) [Arabidopsis thaliana] (TAIR:AT3G60600.3); similar to VAP27-1 (VAMP/SYNAPTOBREVIN-ASSOCIATED PROTEIN 27-1) [Arabidopsis thaliana] (TAIR:AT3G60600.2); similar to Os01g0936800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001045329.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15121.1); contains InterPro domain PapD-like (InterPro:IPR008962); contains InterPro domain Range:  from: 2821555    to: 2825278    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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