Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <---------TOE2(3)                                                                                <---------ATHB12                                                                            --------------->AGL15                                                                            <---------------AGL15                                                                           <-----------------AGL1                                                                           --------->ANAC58                                                                           <-----------------AGL2                                                                           <-----------------AG                                                     <----------DOF2       ----------------->AGL1                                                   ------>ZmHOX2a(2)       --------->ANAC58                                                  <------ZmHOX2a(2)        ----------------->AG                     --------->ANAC46            --------->ARR14(2) <---------ANAC58              <---------ARR11(3)                 --------->ARR11(3) <---------ANAC55(2)             <        --------->YAB1                           <---------ARR11(3) <---------ANAC58 <---------ANAC58  --------->ANAC46 --------->ANAC46            ----------->ARR10    <---------ANAC46 <---------ANAC58 ------TEIL   --------->ARR11(3)            <---------REM1(1)       <---------ANAC55(1)            -- ----TOE2(3)  --------->AHL20(1)     ---------->DOF2 ------>ZmHOX2a(1)   <-----------GT1           <- ----TOE1(3) --------->AHL20(2)   --------->YAB1 <---------ARR14(2) --------->ANAC55(2)           ---   gttcacatcatcaaaatatatacacaaaacattcaagtataaagagatgtagatccttttgtctgagattacttgttacccaataaggcttgcaagtgaa  2820000                                                                                        --------->At4g35610                                                                                        <---------At4g35610                                                                                      --------->REM1(1)                                                                                  <---------At4g35610  --------->KAN4(2)                                                               --------->At4g35610 <---------ICU4                  ------->MYC3                                    <-----------RAV1(1) ---------YAB1                   <-------MYC3                                 <---------DAG2 ------->ARR11(3)     ---------->DOF2      --------->LBD16                    <----------DOF2 --------ARR11(3)  ----------->GT1  <---------AHL20(2)                    --------->REM1(1) ------>YAB1      <------ZmHOX2a(1) --------->AHL20(2)                 <---------ETT(2)------->TEIL <   tgatcattccttcttcatgaggagtaaagtttccacgtttaattccaggtctcagataatttgtccatctcagtctacaacttttgctgcatctcaataa  2820100                 <---------TOE2(3)         ----------------->AGL3                                                                    --       --------->ANAC58                                                                            <-       <----------ID1<-------TEIL                                                         <---------ICU4       --------->ANAC58   --------->YAB1                ---------->DOF2                 --------->ARR11(3)     ---------->DOF2--------->CCA1(2)          ---------->DOF2                          <---------ARR11(3) ----------DOF2  <---------YAB1 <------ZmHOX2a(1)   ---------->DOF2                 ---------->DOF2<-   cccttttaaaagccaaattaagatacaaacatcaggacacatatacaaacaaagaaaagaaagacactagaagaaaacatgttgagaaaagataatgacc  2820200                ------>ZmHOX2a(2)          <---------At4g35610     <---------ANAC46                                                                               <   <------MYB46(1)           <------ZmHOX2a(1)                                                      -   <---------MYB46(3)      --------->LBD16                     <---------ARR11(3)                  <-   <------MYB83 ====================HOX2a_HOX2a                --------->ARR11(3)         <---------ANAC58  <---------AtMYB61       <---------LBD16                     <---------GLK1(1)        ------>ZmHOX2a(1)  <---------MYB46(3)      --------->HSFB2a(2)                 --------->GLK1(1)        <----------DOF2 <--------P   <---------ARR11(3)                            --------->YAB1             ============== ------->ALFIN1--------->GLK1(1)                         --------->YAB1   <------ZmHOX2a(1)     ----- ----------RAV1(1)        <---------HSFB2a(2)   --------->ANAC58          =========================== --------ZAT6 --------->ARR11(3)                --------->ANAC58       <-----------RAV1(2)<---------ANAC58   agtgttggtgggaactgatctccagtttccaggaccatgttcttgaatgtaagaaacaagaatgatatcttcttcaggagtccatggtcctttcttgatc  2820300                                                       ------>ZmHOX2a(2)                                                      <<<<<<<<<GATA-4                                                      <---------GLK1(1)                                                      <<<<<<<<<GATA-2                                                      <<<<<<<<<GATA-1                                                      <<<<<<<<<GATA-3                                                      <------ZmHOX2a(2)     <-----------HVH21                               --------->ARR11(3)  <---------ANAC58                                   <---------ARR11(3)  <---------ANAC58                                   <---------AGP1 ---------ARR14(2)                                --------->HSFB2a(2) -------->ARR14(2)            <----------DOF2     <---------HSFB2a(2)                             *TSS --------CCA1(2)       ------>MYB83             =============HOX2a_HOX2a                         ---- ==HOX2a_HOX2a         ------>MYB46(1)          ------>ZmHOX2a(1)                          --------->ARR14(2) ->ZmHOX2a(2)          -------->P               ==============HOX2a_HOX2a                  --------->GLK1(2) ==HOX2a_HOX2a    <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------CCA1(2)       <----------DOF2<---------ARR14(2)   cctatcttgtcacagcatggaggcctacccatctttctctctctctcttcctctagatctctctgagtcttatgctctctttatagatgtgagaatatgt  2820400                                                                                    =================                                                                                    <----------DOF2                           <-------TEIL                                             <---------DAG2                           ------->TEIL                ---------->DOF2        --------->ARR14(2)                       ------->TEIL                 <---------ANAC46       --------->AHL20(2)      ----------->GT1  --------------->AtSPL8  <---------ANAC58         <----------DOF2 ------->TEIL          <---------------AtSPL8  <---------ANAC58      <---------ARR11(3)  <---------ANAC58 --->TEIL       ----------->RAV1(1)       <---------AHL20(2)         --------->ARR11(3)  <---------ANAC58   atgtatatgagttaaatgcaacatgtatgtacatatatgtgaaattaatgggtgacttaaagaagagggaagaacttttaaatctgctttttcttgacaa  2820500                     <---------O2                     =========================bZIP_DOF                     --------->TGA1a                     <---------TGA1a                --------->At4g35610                <---------At4g35610                --------->ZAT2               --------->ANAC58                                                          --------->ANAC58               --------->ANAC58                                                 --------->ARR11(3)         ------>ZmHOX2a(2)                                               --------->CCA1(2)          <        <---------GLK1(1)                                               --------->ARR11(3)          -        --------->At4g35610                                             --------->ARR11(1)          <        <---------At4g35610                                             <---------ARR14(2)          -       <---------AGP1--------->O2                                 <---------TOE2(3)      --------->ANAC58       --------->ARR14(2)                                        --------->MYB52(1)  <---------ALFIN1       <---------ARR14(2)          <----------DOF2    <---------ANAC46  --------->ARR14(2)  ---------       --------->ARR11(3)         <---------DAG2      <---------ANAC58  <---------ARR11(3)  <-------- <----------DOF2<---------ZAT2  ------>NtERF2         <---------ANAC58----------->ARR10--------->ANAC46 ==============================bZIP_DOF     <-----------GT1    <---------MYB52(2) ------>ZmHOX2a(2)<- ==============================bZIP_DOF    --------->AHL20(2)--------->WOX13(1) <---------ARR11(3)---   cctcttttggatctgccaagctcacgagtcactctgccttttccattaactattttgcgtagtcaattaacgaagatatgttgatctccacacgaatatg  2820600                                                                                            ---------                                                                             --------->TOE2(3)<------                                                                             --------------->AGL15                                                                             <---------------AGL15 ---------ARR14(2)                             --------->WOX13(1)           <-----------------AGL2 -------->ARR14(2)                      <---------DOF5.7(2)                 ========================= ---------ARR11(3)                     --------->ZAT18                      ========================= -------->ARR11(3)                     <---------ZAT18                      ----------------->AGL3 >ARR14(2)                     --------->AHL20(2)                           ----------------->AG -ARR14(2)                     <---------AHL20(2)                           ----------------->AGL1 --------CCA1(2)              <---------AHL20(2)            <-----------GT1 <-----------------AGL3 ---->TEIL                 --------->AHL20(2)<------ZmHOX2a(2)    --------->YAB1 ---------->DOF2 ----   tatatctcccttaagaaaacgttactggattatttatttagtgaacgatccatcaaatgttttttcaatcgaaatatttccataaaaggagctcgttaac  2820700                                                           <------MYB46(1)                                                           ----------->GT1                                                          <---------TOE1(2)                                                          <---------TOE2(2)                                                         <---------MYB52(1)                                                      <-------TEIL                                                    --------->KAN4(2)                                                   --------->KAN4(1)                                                   <---------KAN4(1)                                                  <---------KAN4(2)                                        --------------->AGL15                                        <---------------AGL15                                       <-----------------AG<------MYB83                                       <---------ANAC58<---------MYB46(3)                                       <---------ANAC58--------->MYB52(2)                                       <-----------------AGL1      <---------ANAC46                                       <-----------------AGL3    --------->AHL20(2)                                       <-----------------AGL2 <---------ICU4     --------->YAB1                                 <---------AHL20(1)<---------HSFB2a(1)          <---------ZAT6 >DOF5.7(2)                      <---------ARR11(3)--------->HSFB2a(1)        ----------->GT1 ---DOF5.7(2)                    --------->ARR11(3)--------->HSFC1(2)  <---------YAB1 ========================================================MADS_MADS <---------ANAC55(2) =======================================================MADS_MADS<---------AHL20(2)--------->ICU4 ----->ARR11(3)                  --------->AHL20(1)<---------HSFC1(2)  --------->AHL20(2)     <------   atattgtagatgaatacatagtgtatcgattacaatattttgcttaatttggaacattcgttggtaattacttataaatatagtgataatcaactcataa  2820800                                                                                                  ---                                                                      ---------->DOF2             ---                                                                  --------->AHL20(2)              <--                                                                 --------->AHL20(2)    --------->ANAC58                        <---------ANAC58                     --------->AHL20(2)   --------->ALFIN1<--                        <---------ANAC58        <---------YAB1   <---------AHL20(2)    --------->ANAC58                     <<<<<<<<<MYB98     --------->YAB1     --------->ANAC58     --------->ALFIN1  ---              --------->ANAC58         <---------YAB1      ----------->GT1   --------->DAG2       <--              --------->ANAC46       --------->YAB1        --------->ANAC58 ---------->DOF2      ---- ---YAB1      --------->ANAC58      <---------YAB1    <---------TOE2(3)   --------->ARR11(3)     <---   atggaagaagagtcacaagctatgttacttacatttttgtgataatagttgtaattgtggtaagaaaataaataaagataaagtgtgggaagaaacacaa  2820900  Previous    Next  AGI:  At1g08810.1    Description:  MYB60 (myb domain protein 60); DNA binding / transcription factor. similar to MYB30 (myb domain protein 30), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G28910.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45405.1); contains InterPro domain Myb transcription factor (InterPro:IPR015495); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778) Range:  from: 2819068    to: 2820398    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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