Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          --------->GLK1(2)                                  <------ZmHOX2a(2)                                 <---------ARR11(3)     <---------ARR14(2)   --------->ANAC46                            --------->TOE1(2) --------->YAB1             --------->CCA1(2)      -----                            --------->TOE2(2)<---------ATHB12           <---------ARR14(2)     <-----                           --------->YAB1  --------->WOX13(1)           --------->ARR14(2)  --------- -------MYB52(1) <----------DOF2 --------->ARR11(3)     --------->ARR14(2)<-------TEIL --------->ICU4   gtttgtctagtagccaactctttgcagaaacataagatcaagaatcaatcaggcttcaaatctgcatcaatgtagatacacatcaaacaattagtaaaga  2817200                                                      <---------AHL20(2)                                                      --------->AHL20(1)                                                      <---------AHL20(1)                --------->ICU4                --------->ARR11(3)     --------->GLK1(2)          <---------TOE2(3)    --------->ARR11(3) ------>GT1     --------->AHL20(1)    <---------GLK1(2)<---------AHL20(2)            <---------TOE2(3) ----------AtSPL8                     <---------ARR11(3)         ---------->DOF2 --------->CCA1(2) ->DOF2         <---------AHL20(1)  <---------YAB1    --------->AHL20(2)  ---------->DOF2   gtacaaaaatatgagaaaaatattgaatcaataacatcaagattctactcagaaaatataatgagactaaagttgataaagagatttgagataatgaaac  2817300                                                                                                    >                                                                                                    <                                        <---------ARR14(2)         --------->CCA1(2)                >                                        --------->ARR14(2)        <---------GLK1(2)                 >                                   --------->ARR14(2)             --------->ARR14(2)                >                                   --------->GLK1(2)              <---------ARR14(2)                >                                  <---------GLK1(2)            ----------------->AGL1              --               ---------->DOF2  --------->LBD16          <---------YAB1           --------->ANAC58 --       <---------ANAC46        <---------HSFB2a(2)      --------->ARR11(3)        --------->ANAC58 --       <---------ANAC58        --------->HSFB2a(2)      <---------ARR11(3)  --------->MYB52(1) ------       <---------ANAC58     --------->ARR11(3)         --------->YAB1  <----------ID1         -------   aaacttgattcgtgcagaaaagacaactaatatccagaatccaatccgatttacaaatgatatttgcagatttgggacaaacagaagcaagaacagaaaa  2817400 >>>>>>>>>WRKY38 ---------WRKY18(1) >>>>>>>>>WRKY26 >>>>>>>>>WRKY43                                                        <------ZmHOX2a(2) >>>>>>>>>WRKY6                                                        <---------ARR11(3) >>>>>>>>>WRKY11            <---------AHL20(2)                         --------->ARR11(3)    <------- ------->WRKY12       <---------ANAC58                             <------ZmHOX2a(1)    --------->ANAC58 ------->WRKY38(1)    --------->ANAC55(2)                      <---------ZAT14          --------->ANAC58 ------->WRKY45       <---------ANAC58                       --------->ZAT14            ============= --->DAG2      --------->DAG2    <-----------GT1          --------->LBD16               --------->TGA1a --->DOF2     ---------->DOF2   <-----------GT1<---------ZAT6<---------ZAT14 --------->AHL20(2)   gttgaccaaaacaagataaagcttacgtttttatttagccttcttaatagtgtttatctccagagtacaggaagatcaaatatttatctcaagtcagcaa  2817500                                                                        <------ZmHOX2a(2)                                                                        --------->CCA1(2)                                                                       >>>>>>>>>GATA-4                                                                       --------->AGP1                                                                       <---------ARR11(3)                                                                       --------->ARR11(3)                                                                       >>>>>>>>>GATA-2                                                                       >>>>>>>>>GATA-3                        <---------ARR11(3)                             >>>>>>>>>GATA-1                    ---------->DOF2                                   --------->GLK1(1)          <---------AHL20(1)                                     ---------->DOF2          --------->AHL20(2)                                  <----------ID1          --------->AHL20(1)                                --------->DAG2          <---------AHL20(2)                          ----------->RAV1(1)------>ZmHOX2a(2)         <---------AHL20(2)     --------->MYB46(3)    <---------------AGL15         --------->AHL20(2)   <-----------GT1         --------------->AGL15                 <--------       --------->YAB1   --------->ARR11(3)           ----------------->AGL1                 --------- --At4g35610     ----------->RAV1(1)                 ----------------->AGL3            ----------->HVH21 ==============================bZIP_DOF    --------->YAB1  ---------->DOF2   ---------->DOF2<--------   ttgaagcaaaaataaattccaacaaagattttaaaccactctaaatcaaaagtttgccacaaaaaggaaaagagatctaaaaagaacaattgacagctca  2817600                                                      <------ZmHOX2a(2)                                                  <---------TOE1(2)                                                --------->TOE1(2)      <---------AHL20(2)                     --------->REM1(2)          --------->TOE2(2)   <---------AHL20(1)                  <---------ANAC58             --------->YAB1       --------->AHL20(2)    --------->YAB1<---------ANAC58          --------->WOX13(1)      --------->AHL20(1) -ZAT2    --------->YAB1                  <------ZmHOX2a(2)         <---------ARR11(3)     ---------- >At4g35610       <---------ANAC46        *TSS<---------ATHB12 ------------>CBF ------>ZmHOX2a(2) -At4g35610 <---------YAB1                ------------>CBF    ----------->RAV1(1)    --------->AHL20(2)   acaaaatcagaattagaattgtgtgtagaagaaatactaaatggatcaatcatacgatcaagacccacaatattttatatgatccaactaaatataagcg  2817700                 <---------DAG2   ------>ZmHOX2a(2)              <-----------GT1 <---------YAB1          --------->ARR11(3)<---------ICU4                                     --------->GLK1(2)<----          --------->GLK1(2)<---------YAB1                                      <---------ARR11(3)          <---------ARR11(3)--------->YAB1                              --------->GLK1(2)    <-------   --------->HSFB2a(2)   <---------ICU4                            ----------->GT1         ----------   <---------HSFB2a(2)   --------->YAB1                          ----------->GT1      ---------->DOF2 >DOF2    <-----------ARR10--------->ICU4                      ---------->DOF2 --------->ARR11(3)   ctgttatagaaaaatctaaccttttgatcatgatgatcgccagagtaagtctcaattacagagtagaaagtgaaaatccaaaatctagcaaagttgtgat  2817800                                                                                 --------->ANAC58                                                                                 --------->ANAC58                                                                                 --------->ANAC46                                                                                ------->TEIL                                                                              --------->ZAT18                                                                              --------->ZAT14                                                                              <---------ZAT14                                                                          <------ZmHOX2a(1)                                                                     --------->ZAT2                                         <---------AHL20(2)          <---------ZAT2                                       <---------AHL20(2)           --------->ANAC58                                      <---------AHL20(1)            --------->ANAC58         --------->At4g35610          --------->AHL20(1)        <---------ARR14(2) -----YAB1                         <---------AHL20(2)           --------->ARR14(2)    <---------ZAT6 --YAB1 <---------ARR11(3)         --------->AHL20(2)     --------->DAG2--------->ANAC58 ->GT1  --------->ARR11(3)   ------>ZmHOX2a(2)          ---------->DOF2 --------->ANAC58   ttttgagggagagcttcacagagaacattgatcccatttatatatttttaaaaaactcaaaaggcagacccagcaaggactgcacgtagtcttcacaact  2817900                                                                   <---------WRKY18(1)                                                                   <-----------GT1                                                              <---------AHL20(2)                                                              <---------AHL20(1)                                                              --------->AHL20(1)                                                              --------->AHL20(2)                                                         ------>ZmHOX2a(2)                                                        <------ZmHOX2a(2)                      <---------AHL20(1)               >>>>>>>>>GATA-2       --------->LBD16                      --------->AHL20(2)               >>>>>>>>>GATA-1  ------>MYB46(1)                      <---------AHL20(2)               --------->AGP1----------------->AGL1        --                  --------->AHL20(2)                   <---------ARR11(3)  <---------LBD16      -----                  <---------AHL20(2)                   --------->ARR11(3)  --------->TOE1(2)   <-----                 --------->AHL20(2)                    >>>>>>>>>GATA-4<---------MYB59          <-----    --------->ANAC55(2)      <----------DOF2           >>>>>>>>>GATA-3--------->AtMYB61       <------    <---------ANAC55(2)<---------AHL20(2)             --------->GLK1(1) ------>MYB83   ---------->DOF2   aaaatcacttaattttaaaattaataaaattctttgtgagagacattgaatgagagagatctattttattgaccaaaccagggaaaacaaaaagattaac  2818000                                                            <---------ICU4                                                            -------->ATHB1                                                            -------->HAHB4                                                            --------->ATHB51                                                            --------->ATHB12                                                            <---------AHL20(2)                                                            <--------HAHB4                                                            --------->YAB1                                                           <---------ATHB51                                                           --------->ICU4                                                         --------->YAB1  ------->GAMYB                                         <---------AHL20(2) ------->MYB52(1)                                       <---------YAB1 ---->YAB1                                           <---------AHL20(2) ----TOE2(3)                                   <-----------GT1<---------YAB1 <---------AHL20(2)    <- ----YAB1             <---------YAB1     ------>ZmHOX2a(1) <---------YAB1   --------->AHL20(2)  <---- -----GT1    ---------->DOF2            --------->TOE2(3)<---------ICU4     <---------AHL20(2) <-----   ataacagacttaaaaaaaagtcttaatattggtactactagtccttaaataacattttataattattagtcttcacaattaaatcacttagttttatttt  2818100  Previous    Next  AGI:  At1g08800.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G30690.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70635.1); contains InterPro domain Protein of unknown function DUF593 (InterPro:IPR007656) Range:  from: 2813064    to: 2817642    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version