Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                       --------->ARR14(2)                       ----------->RAV1(1)                                              <---------ARR14(2)               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                    <----------TaMYB80               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                      <-----------HVH21--------->ANAC46               <-------TEIL<xxxxxxxxxxxxxxxxsmallRNA(i)                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)               xxxxxxxxxxxxxxxx>smallRNA(i)                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     xxxxxxxxxxxxxxxx>smallRNA(i)                                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)  ----------->GT1      ------>NtERF2                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) --------->LBD16      <---------ETT(1)                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ---------ANAC46      ----------->HVH21                          --------->ATHB12   <---------ZAT18 ---------ANAC55(1)   --------->ANAC46                       --------->ATHB51   xxxxxxxxxxxxxxxxx>smallRNA(fl3) ---------ANAC58--------->ANAC55(2)                          --------->ATHB12xxxxxxxxxxxxxxxx>smallRNA(i) ---------ANAC58<---------ANAC55(2)                         <---------YAB1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------LBD16 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ------>ALFIN1--------->CCA1(2)                --------->MYB52(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) -----P<xxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <---------MYB52(1) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ----->ALFIN1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       <---------AHL20(2)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ---GAMYB    <---------ARR14(2)         --------->YAB1   <---------YAB1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ----MYB46(3)<---------GLK1(2)   --------->ZAT14         --------->AHL20(2) xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --->ALFIN1  --------->ARR14(2) <xxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   ttgcgggtaatttcagatacgtctccgacagacactatagactcatagttagtttctatattattattgatttcatggtcatctagtgcatataccctat  2800700                                                            <---------YAB1                    <------                                                   <---------ANAC58                        <---------                            <---------AHL20(2)     <---------ANAC58                    <---------GLK1(2)                       --------->AHL20(1)          <---------ANAC55(2)                 --------->ARR11(3)                       <---------AHL20(1)          <---------ANAC46                  <---------TOE2(3)                       <---------AHL20(2)          --------->ANAC55(2)               ----------->ARR10                      --------->AHL20(2)        <---------MYB52(1)>>>>>>>>>>>>>>>>>LFY <---------ARR11(3)                      --------->YAB1 <----------DOF2   --------->MYB52(2)            <---------TOE1(3)              --------->CCA1(2)     <---------ANAC58 <---------MYB52(1)              <---------YAB1              <---------GLK1(1)     <---------ANAC58--------->TOE2(3)           <---------TOE2(3)   tctttcttccattgagaaatgcgattatattttaagatgcttttgcattcgttacgttagtttttatagtccaatgtagattaagttaagatttttcttt  2800800                                                                                          --------->ANAC58                                                                                          --------->ANAC55(2)                                                                                          --------->ANAC58                                                                                          --------->ANAC46                                                                          <---------AHL20(2)                                                                          --------->AHL20(2)  --------->GLK1(2)                                                       <---------AHL20(1) <---------ARR14(2)                                                       --------->AHL20(1) --------->ARR14(2)               --------->MYB52(2)        <---------------AGL15       <-----------GT1 <---------GLK1(2)       <-----------GT1                    --------------->AGL15   <---------AHL20(2) ----DOF2        --------->HSFB2a(2)                        <----------DOF2--------->ATHB12 --GT1           <---------HSFB2a(2)             <-----------GT1      --------->ICU4--------->AHL20(2)   acagattctctgattttgtctcgaaatttacatagttagtggaatttcatttctctcttcttcttttttgggataattaattggaattttttacgaaatc  2800900                                                                                 --------->AHL20(1)                                                                                 <---------AHL20(1)                                                                           --------->YAB1                                                                           --------->TOE2(3)                                                                         <---------TOE2(3)                                                                         <---------TOE1(3)                                                                        <-----------GT1                                                                 <---------AHL20(2)                                                                <---------AHL20(2)        <---------ATHB12                                                                --------->AHL20(2)  <---------TOE2(3)                                                            --------->AHL20(2)   --------->AHL20(2)                                              ----------->GT1   <---------AHL20(1)<---------AHL20(2)                          --------->GLK1(2) ---------->DOF2 <---------AHL20(2)   <---------AHL20(2)                 ---------->DOF2          <---------TOE2(3)--------->AHL20(2) --------->AHL20(2)   --           --------->AHL20(2)      <---------AHL20(2)<-----------GT1  <---------AHL20(2)  -----------   aaactgttgaaaaaaaaatcaaagagaaattctatattgaatttaagaaagtaaaaaaccatttaataaaattttaacgataatttaatgtaatcaattt  2801000                                                                                                   <-                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                                -----                                                                                                -----                                                                                                <----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                              -------                                                                                              -------                                                                                            ------>NtERF2                                                                                            <--------                                                                                           --------->DEAR3(1)                                                                                         <---------ATERF1(1)                                                              <---------At4g35610        ------>NtERF2    <---------ICU4                                            --------->At4g35610       --------->ANAC58    --------->ATHB51                                    <---------MYB52(1)              --------->ANAC46    <--------ATHB1                               <-----------GT1                        <---------ALFIN1   --------->ICU4                            --------->AHL20(2)                       <---------ALFIN1   <---------ATHB12                  ---------->DOF2   --------->LBD16         --------->ARR14(2)----   <---------ATHB51                ----------->TBP     <-----------HVH21 <-----------GT1--------->ANAC58 ---------->CBF                --------->YAB1<---------AHL20(2)       *TSS<---------At5g28300-------- ->CBF                 ---------->DOF2   <------ZmHOX2a(1) <---------MYB52(1) <---------MYB52(1)-----   atccaataattcacaacaaaatagacaaagtaatcatataaaaggatttatttactccgtcgtttgctcccgtcttcaccgtttccttccacgcctccgc  2801100   --------->STY1(2)   <---------STY1(2)   <---------ZAT2  --------->ANAC58  --------->ANAC58 -----NtERF2 --->NtERF2 ------>LBD16 ------>ANAC58 ------>ANAC58 ----->DREB2C(2) ----->RRTF1(2) ----->RAP2.3(3) ----->ATERF1(2) ------ATERF1(2) ----->RAP2.3(2) ----->DEAR3(1)                      --------->RAP2.6(2) ---->ATERF1(1)                     <------NtERF2 ---->RAP2.3(1)                     --------->RAP2.3(1) ---->ERF1                         ------>NtERF2 -----LBD16                       <---------DEAR3(1) >NtERF2                          --------->ANAC58         ----------->GT1 ----ATERF1(1)                    --------->ANAC46    <---------SPL7 --->LBD16                        --------->ANAC58   <---------ANAC58                        -------- -->ANAC46                       --------->SPL7      <---------ANAC58                        <------- -->DEAR3(1)                     --------->ATERF1(1)--------------->AtSPL3        <---------YAB1 -ATERF1(1)                     <---------ATERF1(1)<-----------------AGL1        <---------ARR11(3) ----->RAP2.6(2)            <---------ANAC46    <----------DOF2                  --------->ARR11(3) ->ATERF1(1)         <---------GLK1(1)          <---------DAG2      <----------DOF2 <----------DOF2 ---->ORA47(2)       --------->GLK1(1)--------->At5g28300 <---------ZAT6      <---------GLK1(2)   cggcaagctagttttctgactggagttccatcgtggacgccgtaatccctctttttcgtactggtaaattcttttcaatagattatctttgtgatttata  2801200                                      --------->TOE2(3)                                   <---------GLK1(1)                                               --                                   --------->GLK1(1)                                               --                              <-------TEIL                                                         --                             --------->CCA1(2)                                           --------->GLK1(2)                             --------->ARR14(1)                                         <---------ARR14(2)                            --------->ARR14(2)                                          <---------ARR11(3)                            <---------ARR14(2)                                          --------->ARR11(3)                            --------->ARR11(1)                               ------>ZmHOX2a(1)     --               XXXXXXXXXXXXXXXXXXXXX>MIR2933A/B                             --------->TOE2(3)  ------            --------->YAB1----------->ARR10                           <---------ARR11(3)--------->ARR14(2) ->AHL20(2) >>>>>>>>>RAP2.2 <---------GLK1(2)                         --------->ARR11(3)<---------GLK1(2) --AHL20(2) --------->TOE2(3)--------->GLK1(2)                     <---------GLK1(2)  <---------YAB1   tatcaagtctacaatctaaatcggagacgagattcggaaacctcactatcgattccaaacttcaattcagattatcttcctaaaaatgaagattcttaca  2801300                                                --------->ARR14(2)                                                <---------ARR14(2)                                         --------->ARR14(1)                                         --------->CCA1(2)                                        --------->ARR11(1)                                        <---------ARR14(2)                                        --------->ARR14(2)                                   --------       <----------DOF2                 --------->GLK1(1)                        <---------ALFIN1    --------->ICU4                     <---------GLK1(1)            <----------DOF2   <-------------- ------->ANAC58                       ----------->ARR10  --------->ANAC58      <---------ZAT18 ------->YAB1                       --------->LBD16  --------->ANAC58          --------->ZAT14 ------->ANAC58                   <---------LBD16    --------->ANAC58          --------->ZAT18 ------->ANAC55(1)       <---------CCA1(2)<-------TEIL   --------->ANAC58      <---------ZAT14------- --->ZAT6   <---------YAB1       --------->MYB52(1)  --------->ANAC46    <---------AtMYB61   <-------   ctcgtaatgcttttatgctactcgttcgtctcttctaccggagatacgactatccacacaaacaattgggctgttttggtctgcacttctcgcttctggt  2801400                                                                   <---------ANAC58                                                                   <---------ANAC58                                                    <---------MYB52(1)<---------ZAT18              <-        <---------ALFIN1                           <-------GAMYB   <---------ANAC46   <---------YAB1 ->HSFB2a(2)      <---------ANAC58               --------->MYB59<----------DOF2  <---------ZAT2------ ---AGL1--------->ZAT6                    --------->YAB1       <---------ANAC58  --------->At4g35610 ---->GT1         <---------ANAC46        ------>ZmHOX2a(2)    <---------ANAC58  <---------At4g35610 --HSFB2a(2)      <---------ANAC58      <---------ARR11(3)--------->ALFIN1     <--------P      <-----   aaatatactcacactcgattgcttgtaacagagtttttgctcgatcttaattcggttaatgtgtagctttcgtgcccattggtagctgatcaatgtagtt  2801500                                                                                          <---------ARR14(2)                                                                                         ----------->HVH21                                                                                       --------->TGA2(1)                                                                                       --------->bZIP60(1)                                                                                       <---------bZIP60(1)                                                                                       <---------ANAC55(2)                                                                                       --------->ANAC55(2)                                                                         <---------ARR14(2)                                                                         ------->TEIL  <---------TGA2(1)                                                                         --------->ARR14(2) ---------                                                                    <----------DOF2    <---------ANAC58                                                                <------ZmHOX2a(1)      <---------ANAC58                                                             --------->HSFB2a(2)       --------->ANAC58 <---------YAB1                                           =============HOX2a_HOX2a     --------->ANAC58 --------At4g35610                                        ------>ZmHOX2a(2)           ----------->STF1 --->ARR11(3)                 <----------DOF2           <---------ARR11(3)           <---------TGA2(2) ----ARR11(3)         <---------YAB1                    --------->ARR11(3)          ----------->TGA1   cttctgataagtgagtcacaaatggtgataggctttgaagttgtattcttctcaccatgatctctaggacctttgaatctggagttatgacgtaacctgt  2801600  Previous    Next  AGI:  At1g08750.1    Description:  GPI-anchor transamidase, putative. similar to ALPHA-VPE (ALPHA-VACUOLAR PROCESSING ENZYME), cysteine-type endopeptidase [Arabidopsis thaliana] (TAIR:AT2G25940.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65018.1); contains InterPro domain Peptidase C13, legumain; (InterPro:IPR001096) Range:  from: 2801070    to: 2804540    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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