Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                  <---------TOE1(3)                                                          --------->ICU4                                                     --------->ANAC58                 --------->DAG2  ---------->DOF2     --------->ANAC58             <-----------------AGL3                 ------->TEIL<---------TOE2(3)         <------ZmHOX2a(1)--------->TOE1(2)      --------->ANAC58                            <------ZmHOX2a(1)        ----------->GT1   --------->TOE2(2)      --------->ANAC58 <------ZmHOX2a(1)     <------------       <---------TOE2(3)  <---------MYB59  <------NtERF2  <---------YAB1          <---------YAB1   gaagtgaatgaggaaacaaaaattggtacctaagacaaagaaggcagagaaacgcatgtaatgcttaaggaaattggtgaagttatagtagaagaggaga  2771100                       --------->YAB1                      --------->ICU4                  <------NtERF2                 --------->RAP2.6(2)                 ------>NtERF2                <---------DEAR3(1)                <---------ATERF1(2)                --------->ATERF1(2)               <------NtERF2               --------->ATERF1(1)              <---------RAP2.3(1)              <---------ERF1              ------>NtERF2 <----------ID1              <---------RRTF1(1)             <---------DEAR3(1)             --------->ATERF1(2)                                            <---------ANAC46             <---------bZIP60(1)                                          --------->MYB55(2)             <---------RAP2.6(2)                                          <---------MYB46(3)             <---------RAP2.3(2)                                         --------->ALFIN1             <---------RRTF1(3)                                          <---------AtMYB61             <---------RRTF1(2)                                          <---------DEAR3(1)             <---------RAP2.3(3)                 <---------ANAC58     <---------DEAR3(1)             <---------ATERF1(2)                 <---------ANAC58     <---------DREB2C(2)             <---------O2 <------ZmHOX2a(1)     <------NtERF2       --------->MYB52(1)       <-------             <---------ANAC46                 <---------DEAR3(1)    <---------WRKY18(1)   --------->GLK1(2)            --------->RAP2.6(3)              --------->ATERF1(1)   ----------->HVH21     --------->ARR14(2)           --------->MYB52(1)               <-------GAMYB --------->TOE1(2) --------->ALFIN1 --------          ----------->HVH21--------->SPL7  <---------ANAC58       <----------DOF2        <---------GLK1(2)      ---------->DOF2 <---------ATHB12     <---------ANAC58      <---------ANAC58        <---------ARR14(2) ---------WRI1<---------ATERF1(1)          <---------ANAC46      <---------ANAC58   <------NtERF2   acaaggatgaaagtgacggcggcaatgaggacgacgaagacgatggcgttggcgagactaccttcgagcttgacggtggtggagtcggagggattctcga  2771200                         ------>ZmHOX2a(2)                        <---------At4g35610                        --------->At4g35610                        <------ZmHOX2a(2)                       <---------ARR14(2)                       --------->GLK1(2)                       ------->TEIL                       <-----------ARR10                       --------->ARR14(2)                    --------->ANAC55(2)                    <---------ANAC55(2)                   <---------LBD16                 <---------SPL7                ------>NtERF2              --------->RAP2.3(1)              <------NtERF2             <---------RAP2.3(1)            <---------RRTF1(3)            <---------DEAR3(1)           --------->At4g35610                         <------MYB46(1)                              <           <---------At4g35610                         <------MYB83                       <---------O2          --------->MYB52(2)                          --------->MYB46(2)      --------->AtLEC2    <--       ----------------------->TaNAC69(2)             --------->MYB111(1)<------ZmHOX2a(1)<---------TGA1a     <---------TOE2(3) <---------AGP1  ----------->HVH21          <----------ID1  --------->At4g35610 --HSFB2a(2)<---------RAP2.3(3)  <-----------RAV1(2) <--------P <------ZmHOX2a(1) <---------At4g35610 ->HSFB2a(2)<---------RAP2.3(2)<-----------HVH21     ===============================================MYC_MYB   tgtaaatgaggttagcggcgctacggatctgagggtcagaagtgacagagagagagtaggtgagaaggacgacgaggaacatgcagatggagacgggagc  2771300                                                                                    --------->ICU4                                                                                  --------------->AGL15                                                                                  <---------------AGL15                                                                                 ----------------->AGL2                                                                                 <-----------------AGL3            --------->TOE2(3)                                                  --------->ANAC58          --------->GLK1(2)                                                    --------->ANAC46  --------->ANAC46                               --------->TOE2(3)             --------->ANAC58  <---  --------->ANAC58                --------->ARR14(2)                        <---------SPL7       >>>>  --------->ANAC58                <---------ARR14(2)<---------DOF5.7(2)    <---------ANAC58      <--- ---------ALFIN1                 <------ZmHOX2a(1)--------->DOF5.7(2)      <---------ANAC58      ---- ---------HVH21      --------->LBD16      --------->ANAC46   <---------ANAC46 --------->SPL7 --------   catcacgccgataatctcaactccgagggaatcgaggatactagactccatcgttatcgatttcggtggattttttggcttacgccatttttgggagttc  2771400                                                   <---------At4g35610                                                   <---------ZAT2               *TSS                                                   --------->At4g35610      <---------YAB1                                                   --------->ZAT2         --------------------->WRI1                                                <---------ZAT2        <---------AHL20(1)   ------>MYB46(1)  <------ZmHOX2a(1)                             --------->ZAT2        <---------AHL20(2)   ------>MYB83 ------HSFB2a(2)                                --------->At4g35610   --------->AHL20(2) --------->AtMYB61 >>>ZML2                                        <---------At4g35610<---------AHL20(1)    --------->TOE1(2) ------HSFC1(1)                           ----------->HVH21        --------->AHL20(1)    --------->TOE2(2) ----->HSFB2a(2)         <-------TEIL   --------->At4g35610        <---------ARR11(3)<---------ETT(2) ->GLK1(1)      <------ZmHOX2a(1)       <---------At4g35610        --------->AHL20(2)--------->ETT(2)   tagaggaagaagacgagaggagagaggtacttctgagtcttcttctgaccagcagctcgtctatgccaatattttattttgtttgtgtcgacctacgata  2771500                           ------->GAMYB                          --------------->AtSPL8                          <---------------AtSPL8                          --------------->AtSPL3                        <-----------GT1                 ----------->GT1                <----------ID1           ------->GAMYB             ---------->DOF2          --------->YAB1          <---------------AGL15       --------->MYB52(1)          --------------->AGL15    --------->YAB1         ----------------->AGL2  ------------>CBF                                                <---         <-----------------AGL1 ----------->RAV1(1)         <----------ID1                <---------ARR11(3)         ----------------->AGL1--------->REM1(1)         <---------ATHB12                <---------CCA1(2)         ----------------->AG --------->SPL7         ------------>CBF       <----------DOF2     -----     ---------->DOF2    --------->MYB52(1)     <---------MYB52(1)   ---------->DOF2---------->DOF2    <---------AHL20(2)<---------MYB52(2)--------->MYB46(3)<---------ICU4    <---------DAG2--------->ARR11(3)   tatcatttaaagcccaaaagggcaaataacggtacaacaataacagcccattaggcccaataactacaaacaaagctacttttttaaaagtatatctatt  2771600             <---------AHL20(2)            --------->AHL20(1)            <---------AHL20(2)            <---------AHL20(1)            --------->AHL20(2)         --------->YAB1                                                                             <      <---------AHL20(2)                                                                            < <---------ARR11(3)                 *TSS                                                            < --------->AHL20(2)          <------ZmHOX2a(2)                ----------->GT1                      -- --------->ARR11(3)      <---------HSFB2a(2)                  --------->ZAT18                  <----- <---------AHL20(2)      --------->HSFB2a(2)               <---------ANAC46            <---------ARR11(3) <---------AHL20(1)     <---------LBD16             <---------DEAR3(2)                 --------->ARR14(2) --------->AHL20(1)     <---------ANAC46            <---------SPL7                     --------->ARR11(3) ------AHL20(2)      <---------ARR14(2)             ----------->HVH21                  <---------ARR14(2) ---->AHL20(2)       --------->ARR14(2)          <-----------HVH21                    <------ZmHOX2a(1)   taatatattaaaaataaaattcggtttcgggatcaaatgtttcgattttcaggtcggaccggagtggattaaactggatttaaaaccaggattttgcctt  2771700                                       --------->ANAC46                 <---------ANAC58                                       ----------->HVH21                <---------ANAC58                                      --------->MYB46(3)      ------>ZmHOX2a(1)      <---------DAG2                --------->MYB52(1)      ------>ZmHOX2a(2)   --------->ARR14(2)              --------->CCA1(2)       <------ZmHOX2a(2)   <---------ARR14(2)              --------->GLK1(1)      <---------ARR11(3) ---------ANAC46                   <---------GLK1(1)      --------->ARR14(2)                --------- ---------ANAC58                  --------->ARR14(2)      <---------ARR14(2)                --------- ---------ANAC58         --------->At4g35610              --------->ARR11(3)           <----------DOF2 -------->ID1            <---------At4g35610            ----------->ARR10  ---------->DOF2 --------->HSFB2a(2) -----DOF2       <------ZmHOX2a(1)<---------ARR14(2)  ---------->DOF2   <---------ANAC46   <---------HSFB2a(2)   tggcgtaacctttcgaagaggaatgtctgcaaacgagatacccgacgagctatggagaaagatcctagagattggcgtaaagtcttcgactttctcgtac  2771800       --------->At4g35610       <---------At4g35610    <----------DOF2   ------>ZmHOX2a(2)                                                 ------>ZmHOX2a(2)   ============================HOX2a_HOX2a                          --------->HSFB2a(1)  <------ZmHOX2a(2)                                                 <------ZmHOX2a(2)  =============================HOX2a_HOX2a                          <---------HSFB2a(1) <---------ARR14(3)                                    --------->KAN4(2)            <---------ICU4 --------->ARR14(3)                                   --------->HSFC1(2)            --------->ATHB12 --------->ARR14(2)                                   --------->HSFB2a(1) <---------At4g35610 <---------ARR11(3)                             ------>ZmHOX2a(1)  --------->ARR14(2) --------->ARR11(3)                    <---------YAB1--------->ICU4--------->ARR11(3) <---------ARR14(2)             <---------CCA1(2)    <---------YAB1<---------ARR11(3)           ----- <-----------ARR10             ------>NtERF2    ===========================HOX2a_HOX2a<---------GLK1(1) >TOE1(1)   ------->TEIL------>ZmHOX2a(1)      --------->TOE1(2)   <---------ARR14(2) --------->GLK1(1) >TOE2(1)  --------->REM1(1)  --------->DEAR3(1)============================HOX2a_HOX2a        ------   aaagatctttgctgcatctctatctcctctcgccgtctcttccgattgtcctgcgatgattccctctgggatcttctgctcgtccatgatttccctaacc  2771900                         ------->TEIL                         --------->ARR14(2)                        <---------GLK1(2)                    <---------At4g35610                    --------->At4g35610                                                            <-        <---------At4g35610                                          <---------WOX13(1)    <---------GLK1(1) -->GAMYB        <<<<<<<<<TBF1           <-----------GT1           --------->ATHB12        --------->GLK1(1) --->MYB46(3) <<<<<<<<<TBF1   --------->MYB46(3)            --------->TOE2(3)     <----------DOF2 <--   acatcgtctctgcttcttcttcttctgaatctcccaccaagtttatctacatgactaggtaaccttgtttgattgaaatttgtgctttctgagatttctt  2772000  Previous    Next  AGI:  At1g08700.1    Description:  presenilin family protein. Identical to Presenilin-like protein At1g08700 [Arabidopsis Thaliana] (GB:O64668;GB:Q8L9V0); similar to presenilin family protein [Arabidopsis thaliana] (TAIR:AT2G29900.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN73179.1); contains InterPro domain Peptidase A22A, presenilin; (InterPro:IPR001108); contains InterPro domain Peptidase A22, presenilin signal peptide; (InterPro:IPR006639) Range:  from: 2769818    to: 2771480    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g08710.1    Description:  F-box family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO45415.1); contains domain F-box domain (SSF81383) Range:  from: 2771636    to: 2773463    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version