Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <---------ANAC55(2)            <---------ANAC46            <---------ANAC58       <---------ICU4       --------->YAB1      <---------ATHB12      --------->ICU4 -------ICU4<---------ANAC58                                                        --------->ANAC58 -->ZmHOX2a(1)                                                         ----------->GT1 ----------->RAV1(1) ------YAB1 <---------ANAC55(1)  --------->ANAC58          --------->ZAT18          --------->ANAC46 ---->TOE2(3)        ------>MYB46(1)           <---------GLK1(1)  ---------->DOF2   --------->ANAC58 >YAB1<---------YAB1 ------>MYB83--------->ANAC58          <---------ZAT18    <----------DOF2   tcattacaatgataacgtgtaccaaatggtctgataagcacaacaatggaactctcttaagtgcaattgaaagttgtaaactttataggcaacagtaaga  2750900                                                                              <---------MYB52(1)                                                                         --------->GLK1(2)                                                                         --------->ARR14(2)                                                                     --------->ANAC46                                                              --------->ARR14(2)                                                              <---------MYB52(1)         ----------->RAV1(1)                   <------NtERF2                         --------->MYB52(1) <---------ANAC55(2)                 --------->DEAR3(1)                      <---------DOF5.7(2)--------->ANAC55(2)       --------->ANAC58                                  ------------>AtMYB77--------->LBD16       --------->ANAC58                       <---------TOE2(3)    --------->ANAC46     --------->ANAC46       --------->ANAC46              --------->ICU4    --------->ARR11(3)<---------ARR14(2)   -------      --------->LBD16   --------->GLK1(1)  <---------YAB1------------>MYB.PH3(1)      --------->ANAC46   agctcatccacgaattaagccgtcggaattcaattgacaatgtttatgaaggaagaagataacggttacccacaaaatccgtaagtttacacaacaaaaa  2751000                                  --------->DEAR3(1)                                ---------->DOF2                                 <------NtERF2                                 ----------->HVH21                                ------>NtERF2                                 <---------MYB59                                --------->MYB52(1)                           ----------->RAV1(2)                            --------->ANAC58                                --------->MYB52(1)                            --------->ANAC46                 --------->At4g35610 <<<<<<<GRF7                            --------->ANAC58            --------->DAG2      ------->TEIL                       <----------DOF2                 ---------->DOF2 ---------->DOF2 --->DOF2  <---------YAB1 ---------->DOF2------------------------>ANAC81<---------------AtSPL8<------   gaactatcaaacgatgattcttcgactttaaagccaccgaagagaagtggaaaacaaaaaagcagcatcaagagaaagtacctgacaaaagaaggcgatt  2751100                                                                              --------->ALFIN1                                                                         --------->MYB52(1)                                                                        ----------->TGA1                                                                        ----------->HVH21                  --------->LBD16                                  --------->ANAC58                 -                  ------>ZmHOX2a(1)                                --------->ANAC58                <-                 --------->TOE1(2) <---------YAB1                ---------->DOF2<------ZmHOX2a(1)  <-             --------->GLK1(1)   <------ZmHOX2a(1)       <---------TOE2(3) <---------ANAC46        <- ---ARR14(2) <---------GLK1(1) <---------TOE2(3) <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)               <--   tgggagcgcgaagagagttcctgagagaaatttgaggatgatggtaacgaagcgcgtttgatgttgagaaagccatgacggaggagcaagaagtagatag  2751200                                                               --------->ATHB12                                                              <---------YAB1                                                          <---------WOX13(1)                                                        <---------MYB46(3)                                                        --------->ATHB12                                                       <---------YAB1                                                     <------MYB46(1)                                                    --------->MYB46(2)                                                    <---------DEAR3(1)                                                    <---------AtMYB61                                                    --------->MYB111(2)          *TSS  ------------>CBF  <---------PCF2                                    --------->MYB55(2)       <---------ICU4 -------->LBD16                                     <---------MYB46(3)      --------->ICU4 --------ANAC46     --------->GLK1(1) ----------->GT1<------MYB83           <---------ATHB12 --------ANAC58--------->ZAT14     ---------->DOF2  --------->MYB111(1)     <---------YAB1 --------ANAC58<---------ZAT14----------->GT1      <--------P<---------TOE2(3)--------->WOX13(1) -------LBD16<------NtERF2    <---------ZAT6     <---------HSFB2a(1)   <---------At4g35610   --------   tgcgggagccatggcagagcagagctctagtagggttaaaaggaaactagaaggttggtgattgatgtttggaagctaatcattcaatactcaatagttt  2751300                                                                        <----------TaMYB80                                                                        --------->KAN4(1)                                                                        <---------KAN4(1)                                                                        --------->GLK1(1)                                                                        --------->HSFB2a(1)                                                                       <---------ARR11(3)                                                                       --------->ARR11(3)                                                                       --------->ARR14(2)                                                                       <---------ARR14(2)                                                                       ----------->ARR10                                                                 --------->ALFIN1                                                              <---------HSFB2a(2)                                                              --------->HSFB2a(2)                                   --------->ALFIN1          <---------LBD16                                 <---------ANAC58        <---------ATERF1(1)                                 --------->O2           --------->ANAC58<---------GLK1(1)                                 <---------O2         --------->ATERF1(1)                                 <---------ANAC58  <---------ZAT18     ---------->TaMYB80                          <---------ATHB12 <---------ATHB12 ------>NtERF2--------->KAN4(2)        <--                      ------------>CBF   --------->MYB52(1)--------->DEAR3(1)          --------->AtMYB61 <---------TOE1(3)  <---------WRKY18(1)------------>CBF --------->ANAC58<---------HSFB2a(1)       <-- <---------TOE2(3) ----------->HVH21   xxxxxxxxxxxxxxxx>smallRNA(s)    <---------KAN4(2)       ------ ---->MYB.PH3(2)------>NtERF2    <---------ANAC46--------->DAG2--------->LBD16    --------->SPL7 <---   gttaaggctaaaaactgaggcctgaccaatagttcgcgtggcccaatggataaggcgctcgcctccggagggggatattctcggttcgacctccatcgtg  2751400               ---------->DOF2            --------->YAB1           <---------YAB1           --------->ICU4      ----------->GT1                                                                       ------>ZmHOX2a(2)      <------MYB46(1)                                                                      <---------GLK1(1)      <---------ANAC55(2)                                                                  --------->GLK1(1)      --------->ANAC55(2)                                                                  <------ZmHOX2a(2)      <------MYB83                                                                        --------->ARR11(3)     --------->MYB59                                                                      <---------ARR11(3)     <---------TOE2(3)                                                                 <---------TOE1(2)     --------->MYB46(2)             --------->At4g35610              --------->ICU4  <---------LBD16 ---------------AG          <----------DOF2      <-----------GT1    <----------DOF2 <---------ANAC46 ---------------AGL1<---------RAP2.6(2)       <----------DOF2     xxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --->DOF5.7(2) <---------ICU4       <---------At4g35610   --------->ARR14(2)        <---------ANAC58 ------DOF5.7(2)   --------->RAP2.6(3)  --------->MYB52(1)<---------ARR14(2)        <---------ANAC58   aacgaattaggtaataataaagacggcctgctttcttcagcccaactgatttatcggcccaatccagtgtctttattagtttgttttcgtgggatctctg  2751500                                                 <---------DAG2                                                 <----------DOF2                                              <---------ALFIN1                  <---------ARR11(3)        ----------->RAV1(1)                  --------->ARR11(3)     --------->ANAC58             --------->GLK1(1)          <---------AtLEC2               --------->ANAC46    <----------DOF2         --------->ANAC58      <---------ANAC58                   --------->ANAC58<---------CCA1(2)           --------->ANAC46      <---------ANAC58                <---------ATHB12 <---------CCA1(2)             --------->ANAC58   gtttacttacttgcagggattatctcccaattccaatccaaacatgccacacttttcttatctctttttcagatttcaatctcgtccaagaaatcgttta  2751600                                                                                                -----                                                                                                <----                                                  -------->P                                    <----                                                  ------>MYB46(1)                               -----                                                  ------>MYB83                            <----------DOF2                                                <---------MYB59                           <----------                                            --------->GLK1(1)                             <---------DAG2                                         <------MYB46(1)    <-----------GT1       <---------AHL20(2)                                         <------MYB83       --------->ZAT6        --------->AHL20(2)                                       <--------P------>ZmHOX2a(1)           <---------YAB1    <-----                                      <-------GAMYB    <----------DOF2 <---------ZAT18    -----------                                    <---------TOE2(3)  <---------DAG2  --------->ZAT18   <-----------                           <---------AtLEC2 <---------GLK1(1)     <---------GLK1(2)     ------->TEIL   gtactcacattcaatttggaaatgtttttgcataaattggggttggatttcctacctctttttcactagattgtgcattatcaatttatgaactttttct  2751700                        <---------ARR11(3)        <---------AHL20(1)        --------->AHL20(1)        --------->AHL20(2)     --------->TOE1(3)        <---------AHL20(2)     --------->YAB1       --------->AHL20(2)  <---------AHL20(2)   --------->AHL20(1)   --------->AHL20(1)     ------>ZmHOX2a(2) ---->HSFB2a(2)         <---------AHL20(1)   <---------AGP1 -----HSFB2a(2)         --------->AHL20(2)   <---------ARR14(2) -----HSFC1(1)    <------ZmHOX2a(2)          <---------ARR11(3) ---->HSFC1(1)   --------->ARR11(3)          --------->ARR14(2)                            <---------ZAT14 -----AGL15      --------->ARR14(2)    --------->GLK1(2)                                   --------->ZAT14 ----LBD16       <---------ARR11(3)    <---------ARR14(2)                                 <---------ANAC46 ---->AGL15      <---------ARR14(2)    --------->ARR14(2)                           <---------YAB1 ------AGL3      --------->AGP1--------->TOE2(3)                               <------ZmHOX2a(1)   ggaaacatattaaattgtagatccaatattttatcttaacaaatctggatctgttgagaatgtttttctgtaatttagagaggattgtaattgtgtagta  2751800  Previous    Next  AGI:  At1g08640.1    Description:  heat shock protein binding. similar to unnamed protein product [Vitis vinifera] (GB:CAO65063.1); contains InterPro domain Heat shock protein DnaJ, N-terminal; (InterPro:IPR001623) Range:  from: 2748401    to: 2751281    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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