Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <---------ANAC58                                              <---------ANAC58                                           <---------YAB1                                        <---------AHL20(2)                           <---------STY1(1)                                        <---------YAB1                               --------->STY1(1)                                     --------->ARR11(3)                           <---------ALFIN1                                     <---------ARR11(3)                           --------->ZAT6                                     --------->ICU4                               --------->AtMYB61                     <<<<<<<<<TBF1   <---------AHL20(1)                          --------->MYB46(3)              <---------WOX13(1)     --------->AHL20(1)                         ------>NtERF2 ------->YAB1>>>>>>>>>ARR2       <------ZmHOX2a(1)                             --------->RAP2.6(2) ---->YAB1  --------->ATHB12    ----------->GT1                              ------>NtERF2 -----ICU4 <---------YAB1  ------>ZmHOX2a(1)<-----------GT1<---------LBD16  --------->ANAC46---------   atcacattgtgttttgattgttcttcttcctcacaggaaaatattattacttgccaaatgcttcggatgctgtaatctcggccaccactagggatgcact  2700800                                                     ---------->DOF2                                                   <------ZmHOX2a(2)                                               <---------HSFB2a(2)                                               --------->HSFB2a(2)                                              <---------LBD16                <---------ALFIN1    ------>ZmHOX2a(2)                      <---------GLK1(2)      <---------YAB1   --------->At4g35610                 --------->TOE2(3)    --------->ARR14(2)     --------->WOX13(1)   <---------At4g35610               --------->ARR11(3)     <---------ARR14(2) --------->ANAC46 >ZAT18          <---------WRKY18(1) <---------ARR11(3)  ----------->GT1   ----------->RAV1(1)      -   atctgatctgaagaattcttgacctcattttgtctgcaataccttgattctggatcaaagtgtatattctaattgtgcaacacatcagtcactaaacatg  2700900                                                                   <---------MYB52(1)                                                                   --------->At5g28300                                                                  <------MYB46(1)                                                                  <---------DEAR3(2)                                                                  <------MYB83                                                                 <---------MYB46(3)                                                                <---------ORA47(1)                                                              <------MYB46(1)                                                              <------MYB83                                                              <---------MYB46(3)                                                             <---------AtMYB61                                                           <-------GAMYB                                                          <---------ANAC58                                                          <---------ANAC58             <---------YAB1   <---------YAB1        >>>>>>>>>MYB98             <---------AHL20(2) <---------WOX13(1)         <-- --------->YAB1         <-----------GT1    <---------GLK1(1)<---------MYB52(1)       --------->YAB1 -------->ICU4         <-----------GT1    ------->TEIL    <---------ANAC46          <---------YAB1---   aaattataagaaatgaaattttgttttaacatactcttaaaatgaatttccgattttattccgttggtcggtaattgacgactgatatgatgatgcatta  2701000                                                                                      --------->LBD16                                                                               <----------TaMYB80                                                                              <---------KAN4(2)                                                                           <---------DEAR3(2)     --------->ZAT14                                                       <------MYB83     <---------ZAT14                           <-----------GT1             ----------->GT1     <------ZmHOX2a(2)                      --------->YAB1                 <------MYB46(1)   --------->At4g35610              --------->At4g35610              <---------ARR11(3)   <---------At4g35610              <---------At4g35610              --------->ARR11(3)         ----- -------ZAT6                       ------->TEIL--------->YAB1      <---------TOE2(3) --------->LBD16 -------->HVH21                  ---------->DOF2                   <---------YAB1   <---------LBD16   gtgacagatcactgtttgtattaagaagaagacgatgaagctgcaatattcacaattgatacaagaattaagatagtcggtataatcccggtttgcagta  2701100                                                           --------->ANAC58                                                          <---------LBD16                                                          <---------At5g28300                                                 <---------MYB46(3)                                                 --------->MYB55(2)                                                <---------AtMYB61                                              <---------ANAC46                                              <------MYB46(1)                                              <------MYB83--------->RAP2.6(3)                                             <---------DEAR3(1)                                             --------->MYB46(2)        --------->DEAR3(1)                                             --------->MYB55(2)    <-------TEIL                                             <---------MYB46(3)   --------->CCA1(2)                                             --------->MYB52(2)  --------->ARR14(2)                                         --------->HSFC1(2)<---------RAP2.6(2)                              --------->TOE2(3)<---------MYB52(1)<---------ARR14(2)                     --------->bZIP60(2) <---------HSFB2a(1)    --------->At4g35610    ---------->DOF2                     --------->ANAC46    <---------HSFC1(2)<---------ANAC55(2) ------->TEIL ---->ZAT14     --------->ANAC46         <---------MYB46(3)--------->ANAC58 ----------->HVH21   aaccctactctaatgtctaaaccacatcacaacatcaaatagatggttcggtggtttagttacggcagatacaccggcctgaaccgaataaaagaaaact  2701200                                       --------->GLK1(1)                                       <-----         --------->HSFB2a(2)    <----------DOF2                                              --------         --------->LBD16 <---------ZAT14     ---------->DOF2                  <---------At4g35610         ------>ZmHOX2a(1)    --------->At4g35610                             --------->At4g35610 ---         <---------HSFB2a(2)  <---------At4g35610      <---------GLK1(1)  <-----------GT1   <--------        <---------LBD16  --------->ZAT14    --------->LBD16       <----------DOF2     --------->ATHB12       ----------->RAV1(2)   *TSS      <---------GLK1(1)        --------->At4g35610  <---------ATHB12   ggacttggctcctggagaagagaagactgtacagctttctgaattccgaaagaaatgaaatctctctgcttcatttctacagctccattgattcgttcgc  2701300         <---------ARR11(3)                           <---------GLK1(2)      --------->HSFB2a(2)                            <---------ZAT2      <---------HSFB2a(2)                   --------->AHL20(2) ----ATERF1(1)                           --------->TOE2(3) ->SPL7  --------->ARR11(3)              --------->TOE1(3)         ------->TEIL --->NtERF2 <----------DOF2           <---------At5g28300         <---------CCA1(2) <-------TEIL -MYB52(1) ------>ZmHOX2a(2)         <-----------GT1 <---------At4g35610  --------->MYB46(3)        <   ctccatttctcgatctttctccaacaagcttgaatcgatttacccttaaaattccagcttctctctatgtatctcatccaacaagatgcagcatttcaaa  2701400                                                                            --------->TOE2(3)             <------ZmHOX2a(1)                                              --------->TOE1(3)           <---------TOE2(3)                                          <-------TEIL     --------->ZAT2                                               <---------TOE1(2)                --     <---------ZAT2           <---------ATHB12                    <---------TOE2(2)               --- -----------HVH21         ----------------->AGL1 <------NtERF2<---------LBD16                <-------TEIL   cccgtcgagctctgaggaattgttgaattccaatggtggaatgtctagggcatcgattagtgtcttcggaggtacttcccttaacaatctcaagatgcaa  2701500                                                                                                -----                                         <---------ZAT2                                      --------                                         --------->At4g35610                                ---------                                      ---------->DOF2                                      --------->ANAC58                           --------->WOX13(1)                   --------->ARR14(2)         --------->ANAC46 ------->ZAT18           <---------ATHB12<---------At4g35610    <-----------ARR10          --------->ANAC58 ------>ALFIN1         --------->WOX13(1)--------->ZAT2         <---------ARR14(2)       <---------AtLEC2   gtgggcagtccaatttctctgcattcaatcaatccattagcaaagctgagtttgagtgatcaggcatttcttctcttggccttcatcgtttgcacggtaa  2701600                                                <---------TOE2(3)    <----------DOF2                                              ---------->DOF2     ------>ZmHOX2a(2)           <------       <---------ANAC58                    --------->YAB1         ======================HOX2a_HOX2a ----->DOF2                              <---------WOX13(1)     --------->ARR11(3)            ------- ->At5g28300          <-----------GT1  --------->ATHB12   <----------DOF2           <-----------HVH21 -->GT1<---------ANAC58               <-------TEIL        <---------DAG2         ------>ZmHOX2a(1)   aaggagtttgctcgtgttttgttttgaccatttttgttgattcattgataaaggtttagactttttgatctcttttgatggtcctctgttacagacttca  2701700  Previous    Next  AGI:  At1g08520.1    Description:  CHLD/PDE166 (PIGMENT DEFECTIVE 166); magnesium chelatase/ nucleoside-triphosphatase/ nucleotide binding. Identical to Magnesium-chelatase subunit chlD, chloroplast precursor (CHLD) [Arabidopsis Thaliana] (GB:Q9SJE1;GB:Q8VZU7;GB:Q9SWY5); similar to CHLI1 (CHLORINA 42), magnesium chelatase [Arabidopsis thaliana] (TAIR:AT4G18480.1); similar to Magnesium-chelatase subunit chlD, chloroplast precursor (Mg-protoporphyrin IX chelatase) (Mg-chelatase subunit D) (GB:O22437); similar to putative magnesium chelatase subunit chlD [Oryza sativa (japonica cultivar-group)] (GB:AAP73850.1); similar to predicted protein [Physcomitrella patens subsp. patens] ( Range:  from: 2696415    to: 2700962    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g08530.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G09995.3); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G09995.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO70794.1) Range:  from: 2701229    to: 2703094    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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