Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                          <---------YAB1                           <----------DOF2       <---------ICU4           ----------->GT1                 <---------YAB1                  --------->ATHB12         --------->ANAC58               <---------At4g35610             <---------ANAC55(2)        --------->ANAC58            <-------TEIL  <---------DAG2       --------->ANAC55(2)        <---------ANAC55(2)        <---------------AtSPL8               <-----------GT1     <-----------GT1  --------->DAG2    ---------->DOF2  <---------ICU4       <---------ICU4    <---------AHL20(2)   ---------->DOF2   catatacaaagaagtacagatgattatgccttttgaaaacctagttattacttattgcatagtttattttctgatcaagtaaaaaaagttatgaacacaa  2696000                                   <---------ANAC46                                        ----------                                   <---------ANAC58                                       <---------WRKY38(1)                                   <---------ANAC58                                       <---------WRKY45                             <-----------RAV1(1)                  <-----------GT1  <---------AHL20(2)                            --------->ARR11(3)                <----------DOF2     --------->AHL20(2)-                         <---------TOE1(3)                    <---------DAG2 <------ZmHOX2a(2)      <         <---------WOX13(1)<------ZmHOX2a(1)      ==================================HOX2a_HOX2a    --      <---------YAB1     <---------TOE2(3)        <------ZmHOX2a(1)        <------ZmHOX2a(1)       <-   ttcttcttatgaatgactctcaaaattaaggatgttgccttggagatttataggagttagcctacttttcaccttgaggatcaattttatagtcaaagct  2696100  <---------YAB1  --------->ICU4 <---------TOE2(3) >DOF2                                      --------->ANAC58                                       <- -------->YAB1                              --------->ANAC58                                       -- ---------ICU4                              --------->ANAC46--------->GLK1(1)                 ------- ------->ICU4                    <-----------GT1     --------->ARR14(2)           <---------AHL20(2) --------ATHB12       <-----------GT1 --------->REM1(1)     <---------GLK1(1)     --------->AHL20(2)-   aataatgtttgtggtctatattagttaccacttgtttactacatccaagcgattgaattcgcatttcccatactcttgacttaattaaaccttgagattt  2696200                                                                                 --------->AHL20(2)                                                                   --------->ANAC58                                                                   --------->ANAC58                                                                   --------->ANAC55(1)                                                    <---------AHL20(2)           <---------AHL20(2)      <---------YAB1                                --------->AHL20(2)  --------->ZAT6   --------->AHL20(2)                             --------->CCA1(2)--------->ANAC55(2)   <---------AHL20(2)   ------>ZmHOX2a(1)        --------->ARR11(3)<---------ANAC55(2)              - --------YAB1      <-----------GT1               <---------ARR11(3)----------->GT1               ---- ------->ICU4     <---------AHL20(2)         ---------->DOF2       --------->ANAC46  --------->YAB1<- -->GLK1(1)      --------->AHL20(2)        ------>ZmHOX2a(1)  --------->YAB1    <---------ATHB12 <--- -------->ATHB12 <---------AHL20(2)    ---------->ID1    --------->AHL20(2)     --------->AHL20(2) --   catgatttattatgcaaaatttaatccttcgctatctatttgttcctaaaagatataaattgaataaaaacgtaactctccaattaataagaaaaacttc  2696300     <---------YAB1                     --------->YAB1   <---------ICU4           --------->AHL20(2)                                               --------   --------->ATHB51         <---------AHL20(2)                                     <---------AHL20(1)   --------->AHL20(2)      --------->AHL20(2)                                      --------->AHL20(2)   <---------AHL20(2)   --------->AHL20(1)    --------->YAB1        <---------AHL20(2)       --------  --------->ICU4        --------->AHL20(2)   <---------YAB1         --------->AHL20(1)       <------- -------->YAB1          <---------AHL20(1)  <---------ARR11(3)      <---------AHL20(1)     <---------ARR11(3) ----->TOE2(3)          <---------AHL20(2)  --------->ARR11(3)      --------->AHL20(2)     --------->ARR11(3) --------AHL20(2)   <---------AHL20(2) ----------->TBP             --------->AHL20(2)<------------CBF -------DOF2<---------TOE1(2)      ------------>CBF              --------->YAB1    --------->AHL20(1) ------->AHL20(2)   --------->AHL20(2) --------->AHL20(2) <-------TEIL             <---------AHL20(2)   tttaattatttttctaggttaattaataaatttataaaacaataaatatcatattagaaattcatactaataaattttgagacattttattgaaatctta  2696400                             <---------bZIP60(1)                             --------->bZIP60(1)                          ----------->TGA1                --------->At4g35610                    ---------->DOF2                       <---------At4g35610                --------->YAB1                 --------->ANAC58  <---------TOE1(3)               <---------ATHB12                --------->ANAC58  <---------TOE2(3)   <---------ARR14(2)   <------ZmHOX2a(1)--------->CCA1(2)<---------ZAT2 ->TOE2(3)   --------->WOX13(1)    XXXXXXXXXXXXXXXXXXX>MIR157D   --------->DAG2 ->YAB1    ------------>CBF  <---------bZIP60(2)    --------->DAG2 ----------AGL3*TSS<------ZmHOX2a(1)---------->DOF2---------->DOF2          ----------->GT1   atgtggatagtgctgcaatcaggaaaggatgacgagacaaaagatagagaagcaaaagtaagctgataaggtttgatacagtagaaaatactatctctta  2696500                                                              <---------ICU4                                                         <-----------TGA1                                                        --------->bZIP60(2)                                                        <---------ANAC55(2)                                                        <---------bZIP60(1)                                                        --------->ANAC55(2)               <<<<<<<<<TBF1                            --------->bZIP60(1)            <<<<<<<<<TBF1                              <------NtERF2                        <--------         <<<<<<<<<TBF1    <---------CCA1(2)         <-----------HVH21                       ---------      <<<<<<<<<TBF1       ------>ZmHOX2a(1)         <---------MYB52(1)          --------->At4g35610    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        <---------LBD16             ----------->RAV1(2)   <<<<<<<<<TBF1  <<<<<<<<<TBF1             --------->WRKY38(1) --------->At4g35610     <----------DOF2   acttcttcttcttcttcttcttcttctcctatctttgaaaatggcgatgactccggtcgcgtcatcatctccagtttcaacctgcagactctttcgctgc  2696600                                                                                          ------>NtERF2                                                                                          --------->LBD16                                                                                 <---------ANAC58                                                                                 <---------ANAC58                                                                                 --------->ANAC55(2)                                                                         <---------ZAT14  --------->HSFB2a(2)                   <---------MYB59                 --------->MYB52(1)   <----------DOF2------>NtERF2                   --------->TOE2(3)            --------->ANAC46      ------>NtERF2 ------->TEIL          <---------ARR11(3)                    --------->ANAC58 ------->PIF5 <---------ZAT14    ===============HOX2a_HOX2a                  --------->ANAC58 <-------PIF5 --------->ZAT14    ------>ZmHOX2a(1)                         --------->MYB52(1)--------->TGA1a ------->TEIL -At4g35610 ------>ZmHOX2a(2)              --------->LBD16      ===================bZIP_DOF         - >At4g35610--------->GLK1(1)           <---------ALFIN1 <---------GLK1(2)--------->ZAT14<---------LBD16   aatctcctccctgatctcttacctaagcctctgtttctctccctccccaaacgaaacagaattgcctcgtgccgcttcactgtacgtgcctccgcgaatg  2696700                                              --------->CCA1(2)                                     <                                             --------->ARR14(2)                                     =                                             <---------ARR14(2)                                     -                                             --------->ARR11(1)                                 <----                                         <---------LBD16                                        =====                                         <-------TEIL                                           <----                                        --------->ARR14(1)                              <---------MYB52(1)                                        --------->CCA1(2)                           ---------->ID1<--                                       <---------ARR14(2)                 --------->ETT(2)     <-----                                       <---------GLK1(2)                  <---------ETT(1)     ------                                 --------->ANAC46         --------->GLK1(1)         <-----------GT1 <              --------->MYB52(1) --------->bZIP60(2)      <---------GLK1(1)------>NtERF2=============             ----------->HVH21 <---------ALFIN1<---------LBD16      ------>ZmHOX2a(1)   <----------DOF2       <---------ARR14(2)    ------>NtERF2<---------ANAC55(2)<---------ALFIN1      <-----------GT1===       --------->ARR14(2) ------>NtERF2--------->ARR11(1)--------->ARR14(2)<---------RAP2.6(3) <-----  <-----------HVH21 <-----------HVH21  --------->ARR14(2)<---------ARR14(2)----------->RAV1(1)------- -------->DEAR3(2) --------->ALFIN1  ----------->ARR10<---------ANAC46    ----------->HVH21  <-------   ctaccgtcgaatcccctaacggtgtccctgcctccacatcagatacggatacggagacggataccacctcctatggccgacagtttttccctttggccgc  2696800         <---------ZAT2         --------->O2         --------->TGA1a       <-----------RAV1(2) -----------RAV1(1) ==================RAV -------->MYB55(2) --NtERF2========================================MYC_MYB ===========RAV -------RAV1(2)                                                                         --------->DAG2 -----GAMYB                                                                            ---------->DOF2 -NtERF2 --------->bZIP60(2)                                                        <------ZmHOX2a(1) --->LBD16<-----------HVH21                                                       ----------->GT1 ---------MYB46(3)                                                           <---------ANAC58 ==================bZIP_DOF                                                  <------MYB46(1) ==================MYC_MYB                                                   <------MYB83 ----At4g35610    --------->GLK1(2)                                          <---------ANAC58 -->RAP2.6(2)     <---------ARR14(2)    <--------P   --------->ANAC46        <---------ANAC46 --RAP2.6(2)      --------->ARR14(2)<-----------RAV1(2)                     --------->MYB59   agttgttggccaggtcagagaatttgcaatttgattctgcaggttgcataattctactcaatttgatttagttggagttgggtataggaaaaagcttcag  2696900  Previous    Next  AGI:  At1g08520.1    Description:  CHLD/PDE166 (PIGMENT DEFECTIVE 166); magnesium chelatase/ nucleoside-triphosphatase/ nucleotide binding. Identical to Magnesium-chelatase subunit chlD, chloroplast precursor (CHLD) [Arabidopsis Thaliana] (GB:Q9SJE1;GB:Q8VZU7;GB:Q9SWY5); similar to CHLI1 (CHLORINA 42), magnesium chelatase [Arabidopsis thaliana] (TAIR:AT4G18480.1); similar to Magnesium-chelatase subunit chlD, chloroplast precursor (Mg-protoporphyrin IX chelatase) (Mg-chelatase subunit D) (GB:O22437); similar to putative magnesium chelatase subunit chlD [Oryza sativa (japonica cultivar-group)] (GB:AAP73850.1); similar to predicted protein [Physcomitrella patens subsp. patens] ( Range:  from: 2696415    to: 2700962    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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