Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <-----------HVH21    <---------ICU4    -------->ATHB1    --------->YAB1                                 ------->TEIL    --------->ATHB12          <---------AHL20(2)--------->ANAC55(2)   --------->ICU4        <---------AHL20(2)     <---------ANAC55(2)        <-----------GT1   <---------YAB1   <---------ARR11(3)     <------ZmHOX2a(1)         --------->LBD16        <--------   agaccatcattgtcacttgcaatatgttttatttgattctgaagaggattatgtatcgttttcaattgtccctgaattcacaaactgtatcgttttacta  2675400           <---------At4g35610           --------->At4g35610                                            <---------MYB52(1)         <---------ANAC46                                               ----------->GT1    <-----------RAV1(1)                                                 <---------ZAT6  <---------At5g28300 <-------TEIL     --------->ARR14(2)      <---------AHL20(2)     <---------ANAC58 <-----------GT1 ---------->DOF2       <---------ARR14(2)     --------->AHL20(2)      <---------ANAC58 ---GT1 <---------At4g35610 ------->TEIL--------->CCA1(2)     <---------AHL20(2)   <---------CCA1(2)   aatttactgttgctgctaacaaagtccatgtatcgttttcagatatgtgtttgaaaaaacaaaatttaatcgaactgttaatctcatttcttatctgcta  2675500                                                                  --------->ARR11(3)                                                                  --------->AHL20(1)                                      ----------->GT1          --------->AHL20(2)                               <---------------AGL15       <---------YAB1                         <---------------AtSPL8            <---------TOE2(3)                        ------>ZmHOX2a(2)                 --------->YAB1                      --------->ARR11(3)          --------->At5g28300                              <-                      <---------ARR11(3)         ----------->GT1  <---------AHL20(1)              ---                  --------->YAB1   --------->ATHB12    --------->YAB1    <---------At4g35610   ------             <---------GLK1(2) ======================================================================   gacaaatacaatacacattctcatgatctagtactattcattgtaaaatgactgtaacaataagattatatattgagctactagcctactacttatccta  2675600                                                                                    <---------ARR14(2)                                                                                    --------->ARR14(2)                                                                                    --------->ARR11(3)                                                                                   --------->GLK1(1)                         <------MYB46(1)               ----------->GT1       --------->MYB52(1)     <---------AHL20(2)  <------MYB83    --------->ARR11(3)                 ---------->DOF2     <---- --------AHL20(2) <---------------AGL15  <---------ARR11(3)           --------->YAB1<---------ARR11(3) ------>YAB1    <-----------GT1         <---------CCA1(2)           --------->AHL20(2)      <-------- >ZmHOX2a(1)   --------->AHL20(2)<------ZmHOX2a(1)---------->DOF2  --------->YAB1  <---------GLK1(1) =================================MADS_MADS--------->TOE2(3)       --------->AHL20(2)       <--------   taaaaatgtaattgaaattaacttatttggtgataggactatatatcttaactaaagatgaaaaaacaataaaaataacaaagggaaatcttcactttat  2675700                                                                                           ----------                                                                                           <---------CCA1(2)                                                                                       ==============                                                                                       <---------TGA1a                                                        --------->AHL20(2)             <---------O2                                           --------->ANAC58---------->DOF2             --------->TGA1a                                          <---------------AtSPL8                       --------->O2                                          <---------------AtSPL3                  --------->PCF2                                   --------->AHL20(2)  --------->AHL20(2)    <---------ZAT14                             <------ZmHOX2a(1)  ----------->GT1              --------->ZAT14 -----YAB1                  ----------->GT1--------->ANAC58======================================bZIP_DOF --DOF2                    <---------TOE2(3)  --------->MYB52(1)     <------------CBF<---------ALFIN1 -DAG2                     <---------TOE1(3)<---------MYB52(2)   <------ZmHOX2a(1)<---------ZAT18   tatggagtaatagaactctctaattatctaaggaaaaaaaaatgcaagtaccgaaaaataaaaaagaggaacattgtagtatagtccccacttgtctctc  2675800                                        <---------ZAT14                                        --------->ZAT14        <---------CCA1(2)                                        --------->ZAT18     --------->MYB46(3)                                        <---------ZAT18    --------->ANAC58                                    <---------------AtSPL8 --------->ANAC46                                <---------RVE1(1)          --------->ANAC58                               --------->ARR11(3)        <---------ALFIN1                        <----------DOF2<-----------GT1  --------->MYB46(3)                        <--           <-----------GT1     <---------GLK1(2)      --------->ANAC46                     <--------- >ID1     *TSS----------->RAV1(1)   --------------->AtSPL8------>NtERF2                  ------>ZmHOX2a(1) ==================================bZIP_DOF    --------->TOE2(3)                     ------>ZmHOX2a(1)   ttcgtctccaaataaaccacattagtcttttcagattttttgtacacttccttcatcccccacccatctctctctctctctctcatccttcctctttctt  2675900         <----------DOF2         <---------DAG2  <---------ANAC58    --------->AHL20(2)                   --------->ATHB12  <---------ANAC58<---------AHL20(2) --------->AHL20(2)   <---------YAB1 --------DOF2 <----------DOF2  --------->HSFB2a(2)       ------>ZmHOX2a(2)                       ---- -DOF2---------->ID1  <---------AHL20(2)           <----------DOF2       ---------->DOF2        <----   ctttgcttgcccttttctttttattttattcttccaaaatcaaatagttccttctttgatctcattgggataactaaaagtttcaagaagagaaacatat  2676000                                                                              <---------ZAT18                                                                              --------->ZAT18                                                                           --------->At4g35610                                                                         <---------GLK1(2)                                                                        <---------ZAT2                                                                        --------->At4g35610                                                                        <---------At4g35610                                                  <---------ANAC58   <---------ZAT14                       --------->AHL20(2)         <---------ANAC58   --------->ZAT14               --------->ANAC58             --------->At4g35610    --------->ANAC46               --------->ANAC46             ----------->RAV1(2)   --------->At4g35610 ----->ATHB12  --------->ANAC58             <---------At4g35610 <---------ZAT14   <---------ALFIN1 -----YAB1   ----------->RAV1(1)     <---------GLK1(1)          --------->ZAT18--------->ANAC46------   cattgaagagagaacccacacaaaaaaaaatgtctgtagatttctcatctgagcgtgtttgctatgtccactgcagcttctgcaccacgattttagcggt  2676100                                                                                        --------->TOE2(3)                                                                              <---------DAG2                                                                              <----------DOF2                        <---------ARR11(3)           <------MYB83        <------ZmHOX2a(2)                        --------->ARR11(3)          <---------------AtSPL8   <---------DAG2                       <---------CCA1(2)            --------------->AtSPL8------>ZmHOX2a(2)            <----------DOF2                 <---------ZAT6              <---------ARR14(2)            --------------->AGL15           ----------->GT1             --------->ARR14(2)          ------>ZmHOX2a(1)           ---------->DOF2<------MYB46(1)    --------->ARR11(3) --->At5g28300     ----------->GT1---------->DOF2   --------->MYB59     <---------ARR11(3)          -   aatctccctctcctctttatattgtaaatctttctcaaaagaaagagtgttaatttggtacttactctgagctagatccccttttctctaacttaaatca  2676200                                         <------MYB46(1)                                         <------MYB83                                        --------->MYB46(2)                                        --------->MYB111(1)                                        <---------DEAR3(1)                                        --------->MYB111(2)                            ------>MYB83--------->MYB55(2)                            ------>MYB46(1)                          <---------MYB59----------->GT1                         --------->ANAC55(2)     <---------ARR11(3)                       <-----------GT1  <---------MYB46(3)                   --------->AHL20(2)   <---------AtMYB61                  <---------AHL20(2)   <--------P--------->ARR11(3)             ------->TEIL               --------->AHL20(1)      <---------MYB55(1)                ------->TEIL            --------->CCA1(2)         <-------GAMYB                   <---------YAB1           <---------ARR11(3)        <---------MYB46(3)          <---------ANAC58           --------->ARR11(3)  ---------->DOF2  <---------CCA1(2)<---------AtLEC2 ---------->GT1<---------AHL20(1)    --------->ATHB12            <---------ANAC58             <------ZmHOX2a(2)   aactgttatataagatatatattatttacctatcaaagatggttggtgatatatctatatgtgtattgcatgatgaattttgcatctagttcatagatca  2676300  Previous    Next  AGI:  At1g08465.1    Description:  YAB2 (YABBY 2); transcription factor. Identical to Axial regulator YABBY 2 (YAB2) [Arabidopsis Thaliana] (GB:Q9XFB0;GB:Q9SJE5); similar to YAB5 (YABBY5), transcription factor [Arabidopsis thaliana] (TAIR:AT2G26580.2); similar to YAB5 (YABBY5), transcription factor [Arabidopsis thaliana] (TAIR:AT2G26580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67427.1); contains InterPro domain YABBY protein (InterPro:IPR006780); contains InterPro domain High mobility group box, HMG (InterPro:IPR009071) Range:  from: 2675810    to: 2679784    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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