Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      --------->ZAT14                                                                    <---------ZAT18                                                                    --------->ZAT18                                                                    <---------ZAT14                                                                 <---------ANAC58                                                                 <---------ANAC46                                                               <---------ZAT14                                                              --------->ALFIN1                                                             --------->ZAT14                                                             <---------ZAT14     <---------TOE2(3)                                      --------->ALFIN1   --------->KAN4(1)     <---------TOE1(3)   <-----------GT1                    <---------ANAC46   <---------KAN4(1)   --------->STY1(1)<----------DOF2                   <------NtERF2--------->ALFIN1             ----- -------CBF       ---------->ID1                    <---------DEAR3(1)        <---------KAN4(2)<----- ->CBF           <-----------GT1<-----------RAV1(1)<------NtERF2 <---------ANAC58   ---------->DOF2   tgcccctaaggtttggatttttctttttttctctatgttgtttttctcaagtcgtcgtcgcagtgtggagtggactgaagaatattcaaagtcgtttatc  2672000                                 --------->ATHB51                                 <---------ICU4                                 -------->HAHB4                                 --------->ATHB12                                 --------->YAB1                <---------ARR14(2) <---------WOX13(1)                             <-----------GT1        --------->ALFIN1         <--------ATHB1                                --------->YAB1      --------->CCA1(2)         <---------ATHB51                           --------->ATHB12   --------->ANAC58             --------->ICU4                            <---------YAB1   --------->ANAC58             <---------YAB1<---------ANAC58          <---------ICU4 --------->ARR14(2) ---->YAB1 ----------->GT1    --------->YAB1  <---------ANAC58          --------->YAB1 --------->ARR11(3) ----YAB1 <----------ID1     --------->AHL20(2)                        --------->ICU4  <---------ARR14(2)   atcgtaagaaatggggcaaaactggtctcaaataataattgctatgtttcttgctctaatctcttatattgccattatgatttataacaaatcttgttct  2672100                                                                                      <-----------GT1                                                                       --------->AHL20(2)                                                                       --------->AHL20(1)                                                                       <---------AHL20(1)                                                                       <---------AHL20(2)                                                                      <---------AHL20(2)                                                                      --------->AHL20(2) <----------DOF2                                                                  <---------YAB1      <---------AHL20(2)                                                                --------->YAB1   <---------AHL20(2)                                                              ------->TEIL       --------->AHL20(1)                                                           <---------YAB1        <---------AHL20(1)                            <---------YAB1              --------->ARR14(2)      --------->AHL20(2)<--                  --------------->AtSPL8                <---------ARR14(2)      --------->YAB1 <-----   aactaaatctagccgaatgttttgtacatgatacttgtagccaaatgttttttatacgaatatgaatcataaataaattcaattatattttctttatttt  2672200                                                      <---------AHL20(2)                                                     <---------AHL20(2)                                                  <--------ATHB1                                                  <--------HAHB4                                                  <---------ICU4                 <---------AHL20(2)               --------->YAB1               <---------AHL20(2)                 --------->ATHB51            --------->ARR11(3)                   --------->ICU4            --------->AHL20(1)                   --------->AHL20(2)            <---------AHL20(1)                   <---------ATHB12            --------->AHL20(2)                 --------->YAB1         --------->GLK1(1) --------->TOE2(3)            <---------AHL20(2)        <---------TOE2(3)  <-----------RAV1(1)  --------->DAG2 -------YAB1<---------ARR11(3)      ---------->DOF2  --------->AHL20(2)      ---------->DOF2 ----AHL20(2)<---------AHL20(2)--------->AHL20(2)<---------ATHB51--------->MYB52(1)     >>>>>>>>>RAP2.2   atgagagcgaagaatatattttttttgtagtcaaaaaataaaggttctacaataattaaatgtgggataacgaaatccaaaaagctccaatctaaaacag  2672300                                              <---------HSFB2a(1)                                              --------->HSFB2a(1)                                              <---------HSFC1(2)                                              --------->HSFC1(2)                                          --------->ANAC58                                          --------->ANAC46                                      --------->ANAC58                                      --------->ANAC58             --------->TOE2(3)                                     --------->YAB1              <-----------GT1                 <---                                    ---------->DOF2             --------->AHL20(2)            <------                          --------->ZAT14 --------->ANAC58 --------->LBD16                    -------              ------->GAMYB         <---------ATHB12      --------->ANAC46                ---------->DOF2   tacaacatgtcattaacagcatgttcagtccaggcccaataagcacgaaatttctcttctccgaaattaacttaatccttgagtttatttggaaaagaca  2672400                                           <---------ANAC58                                           <---------ANAC58                                          --------->LBD16                                         <---------ANAC46                                         <---------ANAC58                                     <-------GAMYB                                    <-----------RAV1(1)                                    --------->ALFIN1                                  -------------->OsCBT                                  --------->At4g35610                                 ------->MYC4                                          <---------DEAR3(2)                                 ------->MYC3                      --------->AtMYB61   ------>NtERF2                                 <-------MYC4                     --------->MYB46(3)  <---------RAP2.3(2)                                 ------->MYC2                   --------->ANAC46      <---------DEAR3(1)                                 <-------MYC3                 <-----------GT1       ------>NtERF2                                 <-------MYC2     --------->ARR14(2)               ----------->HVH21                                <---------ANAC55(2)          <---------YAB1      ------>NtERF2                                --------->ANAC55(2)        <--------HAHB4       ----------->HVH21 ---                                --------->O2      <---------ARR14(2)            --------->DEAR3(1)<--                                --------->TGA1a *TSS       <---------ICU4--------->WRKY12         <--                                =============MYC_MYB       --------->ATHB51   <---------ATERF1(1)<---                                =============MYC_MYB      --------->ICU4 --------->WRKY38(1) -------- <-----------GT1    <---------MYB46(3)   <---------ANAC58 <---------YAB1<---------MYB52(1)   -------- --------TBP       <---------ATHB12 --------->MYB52(2)------>ZmHOX2a(1)<-------GAMYB<---------ATERF1(1) ---ARR11(3)   ------------>CBF <---------O2    --------->At4g35610--------->DEAR3(1)--------->RAP2.6(3) -->ARR11(3)  --------->TOE2(3) <---------TGA1a <---------At4g35610<---------ALFIN1--------->DEAR3(1)   tttataccccttgttatctcaatggttagagaacacgtgtgttgcgcgtgagcatcctccattattacaccaccgttggcctccgacgacggctcaagcc  2672500             <----------DOF2            <---------GLK1(2)           <------NtERF2          <---------ATERF1(1)          ------>NtERF2                                                      --------->LBD16         <---------DEAR3(1)                                                 --------->DEAR3(1)         --------->ATERF1(2)                                                <---------ANAC46        --------->RAP2.3(1)                                                <------NtERF2        --------->DEAR4(2)                                                ------>NtERF2        --------->ATERF1(1)                                              --------->DEAR3(1)        <------NtERF2                                                    <---------DEAR3(1)        <---------LBD16                                                  --------->ANAC46       <---------ATERF1(1)                                            --------->O2       ------>NtERF2                                                  --------->ANAC46       <---------RAP2.3(1)                                            <---------O2      <---------DEAR3(1)                                    --------->HSFB2a(1)      --------->DEAR3(1)                       <---------HSFB2a(2)    --------->ANAC58    <-----------HVH21             <---------ANAC46          <---------HSFB2a(1) ------>ARR14(2)               <---------ATHB12--------->HSFB2a(2)------>NtERF2 -------ARR14(2)       <-------GAMYB         ----------->RAV1(2) --------->ANAC46                   - ---------ARR10       <---------MYB46(3)--------->O2--------->ANAC58  ----------->HVH21    --------->ANAC46 ------CCA1(2)      <---------MYB52(1)  <---------O2--------->ANAC58  --------->ANAC58 <------NtERF2< ->ANAC58<---------ATERF1(2)  ------>MYB83   <---------At4g35610 ----------->HVH21   <---------ANAC58 ->ANAC58--------->DEAR3(1)   ------>MYB46(1)--------->At4g35610 <---------ETT(1)    <---------ANAC58   tatcttcgtcgccggcttctccgatggttaccaatcgcgtagacgtcttctggcacgaaggaatgctccgacacgacgccgtagaaggcgtcttcgacac  2672600                                                                   <---------ANAC58                 ------>ZmHOX2a(1)                          <------ZmHOX2a(1)          --------->PCF2             <---------GLK1(1)                           <-----------RAV1(2)           <---------TCP20         --------->LBD16                               <-----------TGA1                --------->PCF5        <---------LBD16                             ------>ZmHOX2a(2)                 <-----------HVH21       --------------------->WRI1                  <------ZmHOX2a(2)            ------>NtERF2   --------->ANAC58                                ================HOX2a_HOX2a ----------->HVH21   ----------->HVH21                   --------->LBD16 <-----------HVH21       --------->ANAC46   --------->ANAC58                  <---------LBD16===============HOX2a_HOX2a --------->DEAR3(1) --------->CCA1(2)                <---------ALFIN1--------->ARR14(2)     <---------GLK1(2) -------->ARR14(2)              --------->ANAC58  <---------ARR14(2)<----------DOF2   <---------SPL7 ---------ARR14(2)              --------->ANAC58--------->DEAR3(1) <---------ANAC58------>NtERF2   --   tggatacgaccctggattcctcgacgtattggagaagcacccggagaacgccgatcgcgtcaggaacatgctttcgattctccgacgcggtcccatcgct  2672700                                         --------->HSFC1(2)                                         <---------HSFC1(2)                                         <---------HSFB2a(1)                                         --------->HSFB2a(1)                                         <---------ZAT2                                         <---------At4g35610 <-----------RAV1(2)                          --------->ANAC46                 <-----------HVH21 <---------TOE2(3)                          --------->ANAC58                ==========================bZIP_DOF                          --------->ANAC58                --------->TGA1a    <---------TOE1(3)              <-----------GT1  <---------ATHB12         <---------ALFIN1     <---------TOE1(2)   <-----------HVH21     <---------HSFB2a(2)          <-----------GT1    <----------DOF2---------->DOF2 ---->ZmHOX2a(1)         --------->HSFB2a(2)    <---------TOE2(3) <-------TEIL   <-------TEIL      <-   cctcatgtcaattggtttaccggtcttccagcaatcgtttcggagcttctaatgtttcacacttcaggtacatcgctctaaggttcgcagaaaagaagga  2672800                           <--------P                         <------MYB83                <---------AHL20(2)                         <------MYB46(1)             --------->AHL20(2)         <---------ANAC58                  --------------->AGL15        --------->TOE2(3)           <---------ICU4                  <---------------AGL15        --------->TOE1(3)           --------->ATHB12                 <-----------------AGL1  --------->TOE2(3)                --------->ICU4                 <-----------------AGL2  --------->TOE1(3)                <---------YAB1     --------->YAB1     --------->MYB59  --------->YAB1                <---------YAB1   --------->ANAC55(2)  --------->YAB1 <-----------------AG  <---------ARR11(3)        --------->ATHB12<----------DOF2 ---------DOF2   <-----------------AGL3<-----------ARR10      <----------DOF2   <---------ANAC58   acttttataaaaacctgtttctgaatttggtagttttgacaaatcttaaccttaaaaaattcgactttgatttgtgattattgctttctcatgtaatcca  2672900  Previous    Next  AGI:  At1g08460.1    Description:  HDA08 (histone deacetylase 8); histone deacetylase. Identical to Histone deacetylase 8 (HDA8) [Arabidopsis Thaliana] (GB:Q94EJ2;GB:Q944J5;GB:Q9SJE6); similar to HDA15 (HISTONE DEACETYLASE 15), histone deacetylase [Arabidopsis thaliana] (TAIR:AT3G18520.1); similar to HDA15 (HISTONE DEACETYLASE 15), histone deacetylase [Arabidopsis thaliana] (TAIR:AT3G18520.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO48768.1); contains InterPro domain Histone deacetylase superfamily (InterPro:IPR000286) Range:  from: 2672448    to: 2674625    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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