Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <---------ANAC58                                                <---------ANAC58                                                <---------ANAC46  ------>MYB46(1)            <------ZmHOX2a(1)                                                <---------bZIP60(2)          --------->TOE1(3)                   <---------At4g35610       <---------YAB1       ------>MYB83              <--------             <-----------HVH21        <-----------RAV1(2)       <---------MYB59             ---------             <-------GAMYB      <---------ANAC55(1)          <------ZmHOX2a(1)      ---------->DOF2     <---------RAP2.6(3)        --------->ANAC55(2)         <----------ID1   --------->TOE2(3) >YAB1--------->WRKY18(1)       <---------ANAC55(2)    ---------->DOF2    <-----------GT1  ----------   ctcatgcagtcatgctgttacagcagttcaaattaagtgtccaggttatgacttggtgaaagaggaccaaacttttaaaccttaagaaaagaagaggaaa  2523700                                                                                             --------                                                                                             --------                                                                                            <--------                                                                                            ---------                                                                                          -------->HAHB4                                                                   --------->ARR14(2)     <---------ICU4                                                                   <---------ARR14(2)     --------->YAB1                                                      --------->ANAC58                   --------->ICU4                                                      --------->ANAC46                 <---------ICU4                                                      --------->AtLEC2                 --------->YAB1                          ------->TEIL                --------->ANAC58                --------->ICU4                    <-----------GT1                   --------->ANAC55(1)             <---------YAB1                 <---------CCA1(2)                   <---------LBD16 <-------TEIL   --------->YAB1 --ID1         ------>ZmHOX2a(1)              <------MYB46(1)   <---------ANAC46   <---------YAB1 -->GT1    --------->ARR14(2)            <---------YAB1        <---------LBD16   --------->YAB1     < ->GT1     <---------ARR14(2) <-----------GT1 <------MYB83   ----------->HVH21  <---------YAB1      -   aaaacaattagcctatcctgtatcactgtatgtaaccagacttatgtttggtttccacgcaatttgacggatacatgtttctatgataataataatgata  2523800                                               ---------->DOF2                                               <---------AHL20(2)                           ---------   <---------YAB1                             --------->AHL20(2)                           <---------ARR14(2) ->YAB1                                     --------->TOE2(3)                              --------->ARR14(2) >HAHB4         --------->TOE2(3)          --------->YAB1                                 --------->GLK1(1) -YAB1          --------->YAB1             <---------ICU4                                 <---------GLK1(1) >ICU4    --------->ZAT6            --------->TOE2(3)                                    --------->ARR11(3) ---------AHL20(2)        >>>>>>>>>WRKY6  <---------ATHB12                  <-----------HVH21 ------- -------->AHL20(2)      --------->WRKY38(1)--------->ATHB12          --------->ALFIN1   <------ZmHOX2a(1)   gttttattactaacacaaccatattgttgactatccatccataaatcattaaatcgcaagatgagggaagggtagagcggtcatttggaaggatatcggc  2523900                                     <------NtERF2                                     ------>NtERF2                                    --------->LBD16                                    <---------RAP2.3(1)                                   <---------ANAC46           <---------TOE2(3)                                   <---------DEAR3(1)       <---------AHL20(2)                   ----                                   <---------RAP2.3(2)      --------->AHL20(2)             --------->GLK1(2)                                  <---------LBD16          --------->AHL20(2)              <---------ARR14(2)                               <---------ANAC58     --------->LBD16--------->AHL20(2)      --------->ARR14(2)                               <---------ANAC58     ------>ZmHOX2a(1)                     <---------GLK1(2) <----------DOF2             <---------YAB1         --------->HSFB2a(2)          <---------At5g28300 >RAP2.6(3)                <---------At4g35610      <---------HSFB2a(2)         --------->MYB52(1) -->ANAC46              <------ZmHOX2a(1)       <---------GLK1(1)  <---------AHL20(2)<---------MYB52(1)   aacctttggtgataagcgagagactaggaagatgcttgcggcgaaaatggattcctcgaaaattaatatttaaatcgatagttaaccgttgagaatctcc  2524000                     <---------ALFIN1                   <---------YAB1                    <---------ZAT14        --------->ANAC58           <---------YAB1 --------->STY1(2)--------->ANAC46          <-----------GT1 <---------STY1(2)--------->ANAC58<---------YAB1      <----------DOF2--------->ZAT6    ----------->TBP  <---------WOX13(1)<------ZmHOX2a(2)    ------ ------>DOF2 <------------CBF  <------ZmHOX2a(1)      ----------->GT1    *TSS               <--------   aaagaatgcttttttcattgtcaacactggctaggaaccctatataagccatcgtgtgattaatattcagacatcgatcaaataaacttgaatcaaatct  2524100                                                            <---------At4g35610                                                            --------->GLK1(1)                                                            <---------GLK1(1)                                                            --------->ZAT2                                                            --------->At4g35610                                                            <---------ZAT2                                                           <---------ATERF1(1)                                                        <------NtERF2                                  xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         <---------MYB52(1)                                  <---------MYB46(3)   <---------LBD16       --------->MYB52(1)                            <<<<<<<<<<<<<<<<<LFY       --------->LBD16      <---------WRKY38(1)                            --------->YAB1            <---------LBD16      ----------->HVH21        <                        <---------AHL20(2)            <---------ANAC46     --------->ATERF1(1)     <-      ---------->DOF2<---------AHL20(1)              <---------LBD16<---------AtLEC2               <- --->TOE2(3)         --------->AHL20(1)              --------->ATERF1(1)  <-----------HVH21    <----- -CCA1(2)            --------->AHL20(2)             <---------ZAT2--------->AtLEC2        ---------->DOF2   caaacttgcaaagaaacttgaaatattttataacaatgggtgattctactggtgagccggggagctccatgcatggagtcaccggtagagaacaaagctt  2524200                                                            <---------ETT(2)              --------->YAB1                               --------->ALFIN1             --------->MYB46(3)       <---------RAP2.6(2) <---------MYB52(1)             <---------ATHB12        --------->RAP2.6(3) --------->LBD16         <---------ZAT18          xxxxxxxxxxxxxxxxx>smallRNA(se3)         --------->ZAT14       >>>>>>>>>>DREB2A        <---------LBD16         --------->ABI4(2)     >>>>>>>>>>DREB1A       --------->MYB52(1) ----------DOF2               <----------ID1          ------>MYB83 --------ANAC58               xxxxxxxxxxxxxxxx>smallRNA(se3)<---------ZAT18                --------->ARR11(3) --------ANAC58               <---------ETT(1)        ------>MYB46(1)         --------->MYB52(1)    - -----DOF2 --------->WOX13(1)--------->DEAR3(2)     --------->AtMYB61     --------->DAG2   <---------ARR11(3)   tgctttctcggtgcaatcaccaattgtgcataccgacaagacggccaagttcgaccttccggtggacacagagcataaggcaacggttttcaagctcttc  2524300                                       <---------ARR11(3)                                       --------->ARR11(3)                      --------->HSFB2a(1)                      <---------HSFC1(2)    <----------DOF2                      --------->HSFC1(2)<---------GLK1(1)                         <---------ALFIN1                      <---------HSFB2a(1)------>ZmHOX2a(2)                      ----------->RAV1(1)                      <---------KAN4(1)<---------ARR14(2)                      <---------ALFIN1                      --------->KAN4(1)--------->ARR14(2)                      --------->REM1(1)    -              <---------TGA1a          <---------AGP1                      --------->ZAT2          --              =========================================bZIP_DOF            <---------ZAT2          <-              <---------O2        <---------O2       ------->MYC3          --------->At4g35610     <-              --------->TGA1a     <---------ANAC46   <-------MYC3          =================RAV   <--              --------->O2   <---------CCA1(2)    <---------ALFIN1         <---------At4g35610 ------       <---------ALFIN1--------->KAN4(2)--------->GLK1(1)                  ----------->RAV1(2)<------ ----->ZmHOX2a(1)    <---------KAN4(2)<---------CCA1(2)             <----------DOF2     ---------->ID1   tccttcgccaaacctcacatgagaacgttccatctctcgtggatctctttctccacatgttttgtctcgactttcgcagctgcaccacttgtccctatca  2524400      <-----------ARR10    <---------ARR11(3)   <---------ANAC58      --------->GLK1(2)    --------->ARR11(3)   <---------ANAC58       <XXXXXXXXXXXXXXXXXXXXXMIR853     <---------GLK1(2)   --------->ANAC58   <---------At4g35610  --------->GLK1(2)                 -- --------->LBD16         --------->ANAC58   --------->GLK1(1)    <---------ARR11(3)          <------- -------->LBD16          --------->ANAC46   --------->At4g35610  --------->ARR11(3)          -------- ------->HSFB2a(2)   ------>MYB83         <------NtERF2          <---------ARR14(2)        <---------ANAC58 --------HSFB2a(2)   ------>MYB46(1)     --------->LBD16         --------->ARR14(2)        <---------ANAC46 --------LBD16     <---------MYB46(2)  <---------LBD16           <-----------ARR10         <---------ANAC58 -------LBD16      --------->MYB46(3)--------->ANAC58     --------->HSFB2a(2)              <---------ANAC55(1) --->YAB1         --------->ANAC46   --------->ANAC58     <---------HSFB2a(2)    ----------->HVH21 <- ---ATHB12    --------->AtMYB61   --------->ARR14(2)     <---------LBD16      <-------TEIL<------NtERF2   tccgggagaatctcaacctcaccaaacaagacattggaaacgccggagttgcctctgtctctgggagtatcttctctaggctcgtgatgggagccgtgtg  2524500                    <-------GAMYB               ----------->HVH21                                                     <---------ZAT2               <---------MYB52(1)                                                    --------->At4g35610              <-----------HVH21                                                      <---------At4g35610             --------->ANAC46                                                    <---------bZIP60(2)        <---------PCF2<---------MYB46(3)                                         --------->ANAC58       <---------ANAC58        <---------ANAC58                                  --------->ANAC58       <---------ANAC58        <---------ANAC58                               ----------->HVH21  <----------DOF2 <---------TOE2(3)                                           ----------->TGA1 ------>ZmHOX2a(2)<---------TOE1(3)                      --------->ZAT14<---------ANAC58 ------->ARR11(3) <---------ANAC46                    ------->GAMYB     <---------ANAC58 --ANAC46   <------NtERF2      <---------ANAC46    --------->MYB52(1)   <---------ANAC46 ->ALFIN1  <-----------------AGL1                 <---------ALFIN1     <-------TEIL  --------->ZAT2 --------ARR11(3) <---------YAB1                  ----------->HVH21 --------->At4g35610         -----   tgatcttttgggtccccgttacggttgtgccttccttgtgatgttgtctgccccaacggtgttctccatgagcttcgtgagtgacgcagcaggcttcata  2524600  Previous    Next  AGI:  At1g08090.1    Description:  ATNRT2:1 (Arabidopsis thaliana high affinity nitrate transporter 2.1); nitrate transmembrane transporter. similar to ATNRT2.4 (Arabidopsis thaliana high affinity nitrate transporter 2.4), nitrate transmembrane transporter [Arabidopsis thaliana] (TAIR:AT5G60770.1); similar to ATNRT2.3 (Arabidopsis thaliana high affinity nitrate transporter 2.3), nitrate transmembrane transporter [Arabidopsis thaliana] (TAIR:AT5G60780.1); similar to ATNRT2.2 (Arabidopsis thaliana high-affinity nitrate transporter 2.2), nitrate transmembrane transporter [Arabidopsis thaliana] (TAIR:AT1G08100.1); similar to high-affinity nitrate transporter [Brassica napus] (GB:C Range:  from: 2524073    to: 2526161    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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