Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------ANAC46                    --------->YAB1                    -------->HAHB4                                                            <------                    <---------ICU4                                                            -------                   <---------YAB1                                                            <-------                   <---------ATHB51                                                          <-------                   --------->ICU4                                                       --------->DAG2                  <---------AHL20(2)                                              --------->ANAC58                 --------->YAB1                <-----------GT1                    --------->ANAC58          <------NtERF2  <---------ANAC58  --------->DAG2             ----------->RAV1(1)  --------->ALFIN1        --------->ALFIN1 <---------ANAC58 ---------->DOF2          --------->ANAC46    ---------->DOF2 ----->DOF2     <---------YAB1       --------->YAB1            <---------AHL20(2) ----------->GT1   aagcacataggtggctctataataatggcttctgtgtaagaataaaaagttacctagttttatatataaacacaacaaaatcaaacgaaaaaagtgtgtg  2518100                                                    --------->bZIP60(1)                                          --------->YAB1                                      <---------AHL20(2)                                   --------->AHL20(1)                                   <---------AHL20(1)<-----------HVH21                                  <---------AHL20(2)<---------bZIP60(1) ---ZAT18                     --------->AHL20(2)    <---------TGA2(1) -->ZAT18                ------->TEIL --------->AHL20(2) --ANAC58               <---------AtLEC2 <---------YAB1                                   <---------YAB1 --ANAC58             --------->AtLEC2<---------YAB1--------->TGA2(1)                   <------ZmHOX2a(1)   ctagcttaaacagaagatgagtccatgcatgtttatatatattattataccatgatgtcatggcctctgttcttaagagttgcatttgaaggattatagt  2518200                                                   ------>ZmHOX2a(2)                                                  <------ZmHOX2a(2)                                                  --------->CCA1(2)             --------->ANAC46                               <-----------GT1   --------->ARR11(3)      <---------DAG2        ------                            --------->TOE2(3)    --------->AGP1   <---------At4g35610  <-------------            --------------->AGL15                <---------ARR11(3)      <----------DOF2     <-------           ----------------->AGL1--------->ZAT6  <---------AGP1   <---------CCA1(2) --------->GLK1(1)    <-----------GT1         --------->YAB1 --------->YAB1        ------->TEIL   <---------ALFIN1 <---   ctctattaagccttccaagatgagaaacaatgttaactctctcgttcataagatctatgggagattgcatctctccttttccacacatttcccattccgg  2518300                                                                                           <---------GLK1(2)                                                                                           --------->ARR11(3)                                                                    --------->ANAC46       <---------ARR11(3)                                                                    --------->REM1(1)   <---------TOE2(3)   <---------ARR11(3)                                           ------>ZmHOX2a(1)     <---------AHL20(2)   --------->ARR11(3)                                     <-------TEIL                --------->AHL20(2) --->LBD16                                             <---------ANAC58        --------->ANAC58     - ----AGL1              <------NtERF2                   <---------ANAC58        --------->ANAC58 ----- --LBD16  <---------ALFIN1                  ----------->GT1  ---------->ID1  ---------->DOF2   <----- -------DOF2<---------CCA1(2)        --------------->AGL15--------->SPL7 <---------YAB1---------->DOF2   tttaagttctccccatctctctggccccttctcatcgttcttcttgtagttaaactcgcgttcgtcctctacatcaccattaagcaaattaaagattttc  2518400                                               <-----------HVH21                                              --------->ANAC46                                             <---------LBD16                                       ------>MYB46(1)                                       ------>MYB83                                     <---------MYB59                                     <---------MYB111(1)     <---------ALFIN1                                   ------->TEIL--------->LBD16   --------->ANAC58       --------->AHL20(1)       <---------ANAC55(2)<---------ANAC46       --------->AHL20(2)       --------->ANAC55(2)<---------ANAC58       <---------AHL20(2)       <---------ANAC58   <---------ANAC58  --------->AHL20(2)            <---------ANAC58----------->HVH21--------->ANAC58 ---------->GT1                --------------->AtSPL3       --------->At4g35610 ---->YAB1                     --------------->AtSPL8 ---------->DOF2 ----YAB1                      <---------TOE1(2)<---------MYB52(1)              ----------->GT1   ataagtaaataaaatagagagaaatttaagtcttacgtaccaacttctccgtgacttgaagcagcactcgaaatcgaaacaattgtgaaaatactaaaca  2518500                                                                            <---------ANAC46                                                                            <---------ANAC58                                                                            <---------ANAC58                                  <-----------GT1                        <---------MYB52(1)                                 --------->ZAT18                 ----------->TBP                <---------At4g35610                           <---------ARR11(3)             <-------TEIL        <---------ZAT18    <---------ZAT14---------->DOF2    ---------->DOF2--------->ATHB12             <-----------GT1--------->CCA1(2) ----------->RAV1(1) <---------WOX13(1)  <----------DOF2      --------->ARR11(3)             <-------   gagccacaaagaagatgcaactgattgatgagtagttcaccatctttgttttactgaagagggagatataaaagcgttacgttgatagttttagtcttta  2518600                             <--------P                            <-------GAMYB------->MYC2                            <---------ANAC58                            <---------ANAC58               <------------CBF                           <---------MYB46(3)             --------->ATHB12     <---------LBD16                       --------->ZAT2    <-------MYC2    <---------YAB1      <---------SPL7                  --------->YAB1         <-------MYC3   --------->ANAC55(2)<---------------AtSPL3                 <---------YAB1<------MYB46(1)    ----------->TBP   <---------At4g35610       ------>ZmHOX2a(2)   <------MYB83  ------->MYC3   <---------ANAC55(2)<---------------AtSPL8      <---------WOX13(1)   <------MYB46(1)    --------->At4g35610   --------->At4g35610        ------   <---------YAB1--------->ICU4<------MYB83   <---------At4g35610 <-----------RAV1(2)       --------- ---DOF2    ----------->GT1--------->ATHB12  ------->TEIL--------->ICU4 --------->ARR11(3)  <--------   aaattttgatcgataagttataatgagcttggttgggaacacacatgcagctataaatacttattgagacagatgattttgtacggattactagtccaca  2518700                                    <----------DOF2                             --------->ANAC58                              --------->LBD16                             --------->ETT(2)                            <---------LBD16                             <---------ETT(2)                          --------->GLK1(2)                             --------->ANAC58                        <---------AHL20(2)                          <---------SPL7                            --------->AHL20(2)                          --------->LBD16                           <---------AHL20(1)                         --------->HSFB2a(2)                        --------->AHL20(1)              -                        <---------LBD16      <---------ANAC58       <---------AHL20(2)      --------- --->ANAC46  --------->YAB1 --------->SPL7   <---------ANAC46      --------->YAB1           --------- >ZAT18      --------->TOE2(3)   <---------ARR11(3)            --------->AHL20(2)         <---------ANAC46 -ZAT18   <----------DOF2<---------HSFB2a(2) <---------ANAC58  <---------AHL20(2)        <------NtERF2   agacttcccatgctttcttaattccttccggacgacatctttgacttccttgtaaatatgttttttttaatataatctgggaatagaaggcagggtgtga  2518800                                                                                                    -                                                                                                    -                                                               <---------At5g28300                  -                                                          --------->AHL20(2)                        <                                                          <---------AHL20(2)                        <                                                         --------->AHL20(2)                      ----                                                     --------->AHL20(2)                    <---------GLK1(2) --------->DOF2    ------>MYB46(1)------------>CBF ----------->GT1                   --------->KAN4(2) -->GT1            ------>MYB83 <----------DOF2  ---------->DOF2           --------->ARR11(3)    <--- >ALFIN1           <---------CCA1(2)         --------->YAB1   <<<<<<<<<<<<<<<<<LFY <-------TEIL <----   atcaaagcctaattcatcaccaaatctcttatcactttcaatttgaataagaaaagaaaataaatcacagtgggatttatcttggttcattccgattttc  2518900                <----------DOF2          --------->ANAC46                                     <---------YAB1 --------->CCA1(2)                                          --------->ICU4 -------->ARR11(1)                                        <---------ICU4 -------->ARR14(2)                                        <--------HAHB4 -------->ARR11(3)                                        --------->YAB1 ---------ARR14(2)                                       --------->ICU4 ---------ARR11(3)             <---------ICU4            <---------ATHB12 ----------->AGL15             --------->YAB1            <---------YAB1                <---------bZIP60(2) ------------AGL15            --------->ICU4         --------->AHL20(2)             <---------YAB1 -------------AGL1   <----------DOF2                 <---------AHL20(2)           --------->YAB1   aagatatggcacacagaactttacttttgaaaataatgaagacatattttctcattttaatcattatgttttcatttcttcatattatgatgtgtcaaat  2519000  Previous    Next  AGI:  At1g08080.1    Description:  carbonic anhydrase family protein. similar to carbonate dehydratase/ zinc ion binding [Arabidopsis thaliana] (TAIR:AT1G08065.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21870.1); contains InterPro domain Carbonic anhydrase, eukaryotic; (InterPro:IPR001148) Range:  from: 2516988    to: 2518543    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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