Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                                <----          --------->At4g35610                                                     ---------->DOF2<---          <---------ZAT2                                                    <---------YAB1     <-----          --------->ZAT2                                        ----------------->AG         -------- --------GT1             <-------TEIL                      <---------ICU4 --------->YAB1   <------ZmHOX2a(2) ->GT1    <---------At4g35610   <---------AtLEC2          --------->ICU4 <---------YAB1  <------ZmHOX2a(1)   aacccaagagacagcttccaaacagagttcatttgcattgtgcctcgattccaaaccctactgattaccaaaacgattataagtgaaagaaggatcaatc  2492800                                                                   <---------MYB46(3)         <----------ID1                                          <---------At5g28300       --------->ANAC58              <------MYB46(1)            <---------DOF5.7(2)       --------->ANAC58              <------MYB83               --------->MYB52(1)     ---------->DOF2         ---------->DOF2                    ------------>AtMYB77 ---->YAB1            <------ZmHOX2a(1)                      --------->TOE1(3) -----ICU4          --------->LBD16 --------->MYB111(1)      --------->TOE2(3)                     <- -------DOF2       <---------LBD16  --------->MYB46(2)     ------->TEIL                            -- ----ATHB12        <-----------RAV1(2)      --------->WOX13(1)--------->DOF5.7(2)         --------->MYB52(1) ->WOX13(1)       --------->TOE1(2)<--------P         <------ZmHOX2a(1)      ----------->GT1       <-   tttattcgaaagaaacaaaacccaggaagggaaaagagtaggtgatcaatcggtgaggatgaacattaacggttgcaagttgtataaaaacaaaaccgaa  2492900            <------ZmHOX2a(1)          ------------------------>ANAC81    <---------LBD16                         --------->LBD16         ---------->DOF2 --------ARR11(3)                 ---------->DOF2               <----------ID1                    <-- ------->ARR11(3)    <------ZmHOX2a(1)  --------->PCF2      ---------->DOF2               --------->At4g35610 --------GLK1(2)    ----------->GT1 --------->DAG2      ---------->DOF2 <----------ID1 --------->At4g35610   agattttgggggaaggagacagaggaaaaacagggcaaaagggacccagaaaatcgaataaagaaaggaacaaaggaacaagagagagaagcagaggcct  2493000                             --------->AHL20(2)                    <---------ANAC58                                                      --------->ANAC58                    <---------ANAC58                                                      --------->ANAC58                  ------>ZmHOX2a(2)                                               --------->ANAC58                 <------ZmHOX2a(2)                                                --------->ANAC58                --------->ARR14(3)                                                --------->ANAC46                --------->ARR14(2)                                               <---------TOE1(2)                <---------ARR14(3)                     <------NtERF2            ------>ZmHOX2a(1)                --------->ARR11(3)                    ------>NtERF2           xxxxxxxxxxxxxxxx>smallRNA(i)                <---------ARR11(3)           <----------DOF2   --------->ANAC58<---------SPL7 ------- -------ANAC46  <---------ARR14(2)        ------>ZmHOX2a(2)    --------->ANAC58--------->TOE1(2)   acgtgtatggggaatcgagatctcgtgctcataaattccctcgatcgctgttttgggggcaaaactcgctatctactaggtcctacgaaaacaaggaaaa  2493100                                                                           --------->LBD16                                                                          --------->LBD16                                                                     --------->At4g35610                                                                     <---------At4g35610      <------                                                                   --------->ZAT18            <------                                                                   <---------ZAT14            -------                                                                   --------->ZAT14        <---------ANAC55(2)                                                                   <---------ZAT18        --------->ANAC55(2)         <---------ANAC58               <------ZmHOX2a(1)       <---------ANAC58          <---------O2         <---------ANAC46            <------ZmHOX2a(1)          <---------ANAC58          --------->O2 --->DOF2<---------ANAC58    --------->ATHB12     >>>>>>>>>TBF1 <---------ANAC46      <-----------HVH21   gatgtgtttttgtgtgtgtgtgtgattacatcgattggaggaggaagacgaagaagaagagagattgtgtgcgctcccgagagaacagggtcacgagatt  2493200                   --------->LBD16                  --------->HSFB2a(2)               ------>NtERF2                <------ZmHOX2a(1)           --------->ANAC58        --------->ANAC58           --------->ANAC58--------->YAB1 <---------TOE2(3) ---ARR11(3)  --------->DEAR3(1)   --------->ANAC46                                    <----------DOF2 ---GLK1(2)--------->ANAC46--------->AHL20(2)  *TSS                               <---------AHL20(2) -->ARR11(3)  <---------ALFIN1     --------->ANAC58    <---------ZAT6      --------->MYB52(1)   ttctcttggtttctcgccacccagaaaaattataaacacgcactgaggaagacactagtgtcaaatttgatttagccaaacgaattaatcttttttgaga  2493300                                                                                 <---------WRKY18(1)                                                                                --------->WRKY38(1)                                                       <----------DOF2          ----------->HVH21                                                   --------->ZAT18        --------->ZAT18                                                   <---------ZAT18        <---------------------WRI1                                                   <---------ZAT14        <---------ZAT18        <----------DOF2                --------->YAB1------->TEIL         <---------ZAT14  --------->AtMYB61         --------->ZAT6       ------->TEIL            --------->ALFIN1         <-- ------------>CBF        <-----------GT1      <---------YAB1<----------DOF2<---------RAP2.6(2)   ----   gagaccaatgctttttttttttttttttttccactagtcagtaatagtatgaatgcactttcctttctggttcgagtgcggtttgaccaatgccttctat  2493400                  <---------ARR14(2)                  --------->ARR14(2)                                                       <---------AHL20(2)               <---------ANAC55(2)     ----------------->AG                                --------->ARR11(3)              <-------TEIL       --------->ANAC58        <---------MYB46(3)                <---------AHL20(1)         --------->AHL20(2)      --------->ANAC58       --------->ALFIN1                   --------->AHL20(1) -------AHL20(2)  --------->MYB52(1)   <-----------------AG                               --------->ICU4 ----->AHL20(2)--------->ANAC55(2)     ----------------->AGL1                    <----------DOF2   ataatacaaaatgaaatacataaccggttatcggaacgaaaaccgaaatcggtaaaccgtgggtatacaactatacatcccctctttgtgtaatattttg  2493500                                  ------>ZmHOX2a(2)        ------->TEIL                         <---------ANAC55(1)           --------------->AtSPL8                         <---------ANAC58        <---------At4g35610                  <---------ARR11(3)                         --------->ANAC55(2)<---------ANAC58                          --------->ARR11(3)                         <---------ANAC58   <---------ANAC58                      ---------->DOF2                    --------->MYB52(2) <-----------RAV1(1) <-------TEIL     <---------ANAC58                <----------DOF2 <---------ARR11(3)    <---------ANAC46      <---------ANAC58     ====             ---------->ID1     --------->ARR11(3) ----------->HVH21     <---------MYB52(1)      <---        <----------DOF2  <---------ANAC46   <---------ANAC46   <-------TEIL <---------ANAC46    -----   ttcttcacttcttttggccttttagttgcgtcttgatcttcttgttgcttctggtgacatgtacatccatccctcgttgtgtgtgaaagacctcaaggag  2493600                                                                                 --------->ARR11(3)                                                                    -------->ATHB1                   <---------YAB1                                   --------->YAB1                <------ZmHOX2a(2)                                   <---------ICU4<---------RVE1(1)               <---------ARR11(3)                                   --------->ATHB12         <-----------GT1 <---------YAB1                 <---------ANAC58         <---------GLK1(2) ======================HOX2a_HOX2a                      <---------ANAC58         <---------ARR11(3) ---ZmHOX2a(1) --------->ARR11(3)                  --------->ATHB12<---------ATHB12              <--- ------>GT1   <------ZmHOX2a(1) <---------YAB1     <---------ICU4--------->WOX13(1)             -----   gaaacttatagttacaggatcatggttatgagttatgactcatttgttcttagtcattgcttcagttcaatcattcgttcacagatttttatgagcatta  2493700  Previous    Next  AGI:  At1g08030.1    Description:  similar to hypothetical protein OsI_021001 [Oryza sativa (indica cultivar-group)] (GB:EAY99768.1); similar to hypothetical protein OsJ_019377 [Oryza sativa (japonica cultivar-group)] (GB:EAZ35894.1) Range:  from: 2489559    to: 2493247    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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