Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100   ------->AHL20(2)                                                                        --------->ANAC46 ------>AHL20(2)                    ----------->HVH21                          ----------->GT1 -->AHL20(2)              --------->ANAC46                             --------->YAB1  <-----------GT1 ->GT1       <----------DOF2--------->YAB1   --------->YAB1 ----------->GT1 --------->MYB52(1)      -   ataaaaaaaaaaaaactttgggggtttcactcaaaactctgacacaatcagacagagacatatgctaaaacaattacaaaacagaaaatttacccaatac  2487600           --------->bZIP60(1)           <---------bZIP60(1)                                                                    ---        <---------ETT(2)                                                                          <--        --------->ETT(2)                                                                       <-----        <---------bZIP60(1)                                                                    <-----        --------->TGA2(1)                                                 --------->AHL20(2)  <------        <---------TGA2(1)                                             --------->AHL20(2)      <------        --------->bZIP60(1)                                           <---------AHL20(2)      -------       ----------->STF1  --------->MYB52(1)                      --------->AHL20(2)           <------      --------->YAB1     <---------DOF5.7(2)                     <---------AHL20(2)         <--------     ----------->TGA1<---------TOE1(3)                         --------->GLK1(2)           --------->ALFIN1   <---------ICU4    <---------TOE2(3)              --------->YAB1--------->AHL20(2)     <---------ANAC55(2) -------->YAB1    <---------AHL20(2)                <---------ICU4<---------AHL20(2)     --------->ANAC55(2)   aataacaatgacgacatcattttaaggtaacgaagattgaaacaattccttcaaacatcactgagaatttaattaaaaaaatcacagagataagtgtcgg  2487700        ------>MYB46(1)        ------>MYB83       <---------AHL20(2)       ----------->RAV1(1) --------->AHL20(2)      --------->AtMYB61    --------->AHL20(1)   --------->ANAC58     ------>MYB46(1)   --------->ANAC46     ------>MYB83   --------->ANAC58   <---------MYB59                          --------->MYB52(1) --------->ANAC46     ------->GAMYB                         --------->ANAC58 <---------ALFIN1    --------->MYB46(3)                     --------->ANAC58 ------>ZAT14       --------->ANAC58                        --------->ANAC46 -----TEIL          --------->ANAC58                        --------->ANAC55(1) ----DEAR3(2)       -------->P                              --------->ANAC55(2)               ------- ----MYB46(3)   --------->ANAC58                            <---------ANAC55(2)     --------->ANAC46 ---DEAR3(1)--------->ANAC58                         --------->ANAC58               --------->ANAC58 ---At1g77200   --------->ANAC46     --------->REM1(1)------->GAMYB                 --------->ANAC58 -->ETT(1)  --------->ANAC58<---------AHL20(2)       --------->ANAC46          --------->ANAC58 ---DREB2C(2)   --------->ANAC58   ------>ZmHOX2a(1) --------->ANAC58          --------->ANAC58     - ---HVH21 ---------->DOF2  <---------AHL20(1)      --------->MYB52(1) <------ZmHOX2a(1)      --------   ttcacacaccaacaaagcaagcaaccaaatttatttcctacatttttcgaaaacaacgcaaaacgtaacagaggaaaatgcaagacaagacacaataaaa  2487800                                                     ----------->GT1                                                  --------->HSFB2a(1)                                                 ------->TEIL                                               ------->GAMYB                                              --------->MYB46(3)              --------->MYB52(1)              <---------MYB52(2)           --------->TOE1(3)                --------->MYB52(1)        <---------ZAT14           --------->TOE2(3)             --------->ANAC58  <---------AHL20(2)           <---------------AGL15         <---------ANAC55(2)          --------->ZAT14        <-----------GT1                  --------->ANAC55(2)<---------AHL20(2)     <----------DOF2                     --------->ANAC58  --------->AHL20(2) --->DOF2 ----------------->AGL1         --------->ANAC55(1)<---------YAB1 --------->DOF2       ---------->DOF2    --------->ANAC46  --------->AHL20(1) ->AHL20(2)--------------->AGL15       --------->CCA1(2)   <---------AHL20(1)      <------ZmHOX2a(1)   gagaaagcttttaccctaacgagagaaagagagggagagagagacgcaacgaaccttgtaatataattcgactatacagagaagaggagagagagagaga  2487900        <---------TOE1(1)        <---------TOE2(1)                                                                       <----       <---------TOE1(2)                                                                       ======       <---------TOE2(2)                                                                       <-----       --------->SPL7                                                                       ---------     <---------SPL7                                                                       ===========    --------->TOE2(1)                     <----------DOF2 <-------TEIL                    ---------->DOF2    --------->TOE1(1)                    <---------ARR14(2)    <----------DOF2     ---------->DOF2   <------NtERF2<---------ARR14(2)   <---------LBD16  <---------TOE1(2)            ==================   gagtcgtcgtacgatgacgaactggagatggtctcaaattggggatttagggattgcaggttcgactttgggagggagagagagagaaagagaaaaggta  2488000                           <----------DOF2                        *TSS                     --------->MYB52(2)                   <---------MYB52(1)                  <-----------HVH21                  <-----------TGA1                 --------->TGA1a                                 ----------->GT1                 <---------O2                                   <---------TOE2(3)                 --------->O2                                  <---------ICU4 ---TEIL         =====================bZIP_DOF                --------->ICU4  --------->ANAC55(2) ==========================MYC_MYB                          --------->YAB1    <---------ANAC55(2) ---P            <---------TGA1a                   --------->AHL20(2)         <---------ANAC58 >DAG2           <---------bZIP60(1)              <---------AHL20(2)          <---------ANAC58<------ ==========================bZIP_DOF               --------->AHL20(2)  --------->ZAT6          <------ ==========================bZIP_DOF      <-------TEIL   ----------->GT1 <---------YAB1        <------   gatgggagttttcaatgtctcgtcagtttctttgagagagagattcattcatttaaaatagataataatgtaatactattacttacttacttacttactt  2488100                 <---------TOE2(3)              <---------YAB1            <---------ICU4         -------->ATHB1         <---------ICU4         --------->YAB1                           --------->YAB1        --------->AHL20(2)                        --------->TOE2(3)        <---------YAB1                  ---------->DOF2        --------->ICU4               <----------DOF2                         <---------ARR11(3)        <---------AHL20(2)           --------->TOE1(3)                       --------->ARR11(3)        --------->AHL20(1)           --------->TOE2(3)         <----------DOF2--------->RVE1(1) ---ANAC58  --------->YAB1     --------->TOE2(3)--------->ARR11(3)           --------->GLK1(2)      - ---ANAC58 <---------YAB1  <---------DAG2       <---------ARR11(3)          --------->RVE1(1)      -- ---ANAC46 --------->ICU4  <----------DOF2      --------->GLK1(2)        --------->YAB1          <---   gtatatgaaaattattattatggaaactgcttttcttaactttaaagaaaaatcttaatcagtttctttgagaaataaaaatctctctatcaacgcgttt  2488200                                                      <---------AHL20(2)                                                      --------->AHL20(2)                                                    --------->AHL20(2)     ----------->GT1                               --------->AHL20(1)     <----------ID1                                <---------AHL20(1)   ---------->DOF2                                --------->AHL20(2) -------------->AGL15                          --------->YAB1 --------------->AGL1                         --------->AHL20(2)               --------->YAB1       - --------GT1                   <----------DOF2<---------ATHB12  --------->MYB52(1)        -----------   taccaaaaagaaaaaaaaaactcaattttggttcttttacatatgtcaataaatatatatatacactaactgaagtagtaatagtatttgttaagttaat  2488300                                                                                   <--------HAHB4                                                                          --------->ARR11(3)                                                                          <---------ARR11(3)                                                                          --------->AHL20(1)                                                                      --------->YAB1      <---------At4g35610                                              --------->TOE2(3)       ---------->DOF2  ---------->DOF2                                        ----------->GT1           <---------AHL20(2) <---------YAB1                               <---------MYB46(3)                 --------->AHL20(2)--------->TOE2(3) -------->ANAC46              <---------ANAC46--------->TOE1(3)  --------->ICU4    --------->YAB1 >GT1            <---------ZAT18   <-------TEIL   <-----------GT1<---------ATHB12 <---------YAB1   ccaagtcaattgaaaacgttgcactaaaacttgtgggtacaactgtaacattaaacctcttcttgcaattaataaagatattgtatcattaaagctgata  2488400               --------->RVE1(1)                             <---------DEAR3(2)        --------->ANAC58                                    <---------DEAR3(1)        --------->ANAC58                                    <---------DREB2C(2)        ----------->GT1                                     <---------At1g77200      <--------P              <---------AHL20(2)            <---------DEAR4(1)    ----------->GT1        <---------AHL20(1)     <------ZmHOX2a(1)       <------ZmHOX2a(1)   <---------TOE1(3)       --------->AHL20(2)   <---------TOE2(3)     ---------->DOF2      <---------   --------->DAG2  --------->WOX13(1)       <----------DOF2--------->DDF1----------->GT1  <----------   <---------TOE2(3) <XXXXXXXXXXXXXXXXXXXXMIR1886.2      <-----------RAV1(1)  ---------->DOF2       <   <---------------AtSPL8  --------->AHL20(1)   <---------TOE1(3)   <---------YAB1---------->DOF2 ---   tatataaggtaagtaaaatatcagtcaaatattttatctgaatgggttttaaggaatatatgtcggtgtaatgaaaggataaaagaaagaatttacccat  2488500  Previous    Next  AGI:  At1g08010.1    Description:  zinc finger (GATA type) family protein. Identical to GATA transcription factor 6 (GATA6) [Arabidopsis Thaliana] (GB:Q6DBP8;GB:Q9LN07); similar to zinc finger (GATA type) family protein [Arabidopsis thaliana] (TAIR:AT1G08000.1); similar to zinc finger (GATA type) family protein [Arabidopsis thaliana] (TAIR:AT1G08000.2); similar to GATA-1 zinc finger protein [Nicotiana tabacum] (GB:CAC28528.1); contains InterPro domain Zinc finger, NHR/GATA-type; (InterPro:IPR013088); contains InterPro domain Zinc finger, GATA-type; (InterPro:IPR000679) Range:  from: 2485903    to: 2488024    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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