Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <---------ATHB12           ------>MYB46(1) -------->P------>MYB83 --------->MYB52(1) ------>MYB83                                                                                   ----- ------>MYB46(1)                                                                            --------- -------->MYB55(1)                        ---------->DOF2                                 <---------LBD16 --------MYB55(2)                      --------->TOE2(3)                           <----------DOF2 --------MYB111(2)                     --------->YAB1                              --------->TOE1(3) --------MYB46(2)                      --------->TOE1(3)                       ------>ZmHOX2a(1)----- --------MYB111(1)              --------->ZAT6                                <---------MYB59 ------- ------->MYB46(3)            --------->YAB1     --------->WOX13(1)   <---------YAB1--------->TOE2(3)   acctaccgaaaccaaacatgtttcgcctcaataaacactaatcttaaagccaatctaagagattgaaatttctgataaatcctaactttaaaaccggaaa  2466800                                <---------ANAC46          --------->TGA2(1)                                <---------ANAC58          <---------TGA2(1)                                <---------ANAC58          --------->bZIP60(1)                             ------>ZmHOX2a(2)            <---------bZIP60(1)                   <----                            <------ZmHOX2a(2)      <---------At4g35610                          -----    <---------ALFIN1       --------->ARR11(3)      --------->At4g35610                      <--------  --------->AtMYB61        <---------ARR11(3)  ------>NtERF2                                <-------- ---->ANAC58               --------->ARR14(2)  ----------->RAV1(1)                     <----------DOF2 >LBD16                    <---------ARR14(2) --------->ANAC46                     --------->ANAC58 ---->ANAC58            <---------TOE2(3)     --------->ETT(2)                     --------->ANAC58-- --->DOF2-------->P    >>>>>>>>>WRKY18        ----------->HVH21     <---------ALFIN1  <---------DAG2   gaaaccacacttacccttgaaacattgacgatctgcgtgaagttatcgacgacagatgtgatgtcagtctccactctctgtaacaacgccttttgcttct  2466900                   ------>NtERF2                   <---------RAP2.3(1)                   <---------ATERF1(1)                  --------->ATERF1(2)                  <---------DEAR3(1)                  <---------RAP2.3(2)                  --------->ATERF1(1)                  <---------RAP2.6(2)                  --------->DEAR3(1)                 <---------At4g35610                 <---------DREB2C(1)                 --------->RAP2.3(1)                 <------NtERF2                 --------->ATERF1(1)                 <---------ATERF1(1)                 --------->At4g35610                 --------->DREB2C(1)                 --------->DEAR4(2)                <---------RRTF1(1)                <---------RAP2.6(1)                <---------ATERF1(1)                ------>NtERF2                <---------DEAR4(2)                <---------ORA47(2)                <---------RAP2.3(1)                <---------ERF1               --------->ALFIN1               <---------RAP2.6(2)               --------->ATERF1(2)               --------->DEAR3(1)               <---------ATERF1(2)               <---------RAP2.3(3)               <---------DEAR3(1)               <---------RAP2.3(2)               <---------ANAC46              --------->At4g35610              <---------At4g35610              <---------ABI4(1)              <------NtERF2              --------->RAP2.3(1)              --------->DEAR4(2)              --------->DREB2C(1)             ------>NtERF2             <---------DEAR4(2)             <---------ATERF1(1)             <---------RAP2.3(1)             <---------ERF1             <---------RRTF1(1)             <---------RAP2.6(1)             <---------ORA47(2)            <---------RAP2.6(2)            <---------ATERF1(2)            --------->ATERF1(2)            --------->DEAR3(1)            <---------DEAR3(1)            <---------ANAC46            --------->ALFIN1            <---------RAP2.3(2)            <---------RAP2.3(3)            <---------RRTF1(3)            <---------RRTF1(2)           <------NtERF2           <---------ABI4(1)           --------->DREB2C(1)           --------->ATERF1(1)           <---------At4g35610           --------->RAP2.3(1)           --------->DEAR4(2)           --------->At4g35610          <---------RAP2.3(1)                                  <---------ALFIN1          <---------ORA47(2)                                 <---------At5g28300          <---------ERF1                                    <---------ALFIN1          <---------DEAR4(2)                               ------>ZmHOX2a(2)          ------>NtERF2                                    --------->MYB46(3)          <---------ATERF1(1)                              <---------ABI4(2)          <---------RAP2.6(1)                            --------->ARR14(2)          <---------RRTF1(1)                             <---------ARR14(2)         <---------ANAC46                            <------NtERF2         <---------ATERF1(2)                         <---------LBD16         --------->DEAR3(1)                         ------>NtERF2         --------->ALFIN1                           --------->MYB52(1)         --------->ATERF1(2)                       --------->DEAR3(1)         <---------RAP2.6(2)                     ------>NtERF2--------->ORA47(2)         <---------RRTF1(3)                      --------->LBD16         <---------RRTF1(2)                      <-----------HVH21         <---------RAP2.3(3)                     <---------ATERF1(1)         <---------RAP2.3(2)                    --------->ANAC58         <---------DEAR3(1)                     --------->ANAC46        <---------ABI4(1)                       --------->ANAC58        <------NtERF2  <-------GAMYB           --------->MYB46(3)        --------->ATERF1(1)                    ------>ZmHOX2a(2)       <---------ATERF1(1)                    <---------ATERF1(1)       <---------RAP2.3(1)                    <------ZmHOX2a(2)------->GAMYB   --------->ATHB51       ------>NtERF2------>NtERF2            --------->ARR14(2)--------->DEAR3(1)      <---------DEAR3(1)       <---------At4g35610 <---------ALFIN1            --------->YAB1      <------NtERF2<---------SPL7     --------->MYB46(3) <---------TCP20       <---------ICU4      --------->ATERF1(1)      --------->At4g35610--------->MYB46(3)           -------->HAHB4     --------->LBD16<------NtERF2    =================HOX2a_HOX2a  <----------DOF2     <---------LBD16--------->ATERF1(1)<---------ALFIN1  <---------TCP16(1) <---------ICU4     --------->At4g35610<---------MYB52(1)   <---------GLK1(2)--------->MYB46(3)     ------>NtERF2<---------ATERF1(2)=============================HOX2a_HOX2a --------->ICU4    --------->DEAR3(1)<---------MYB46(3)     <---------ARR14(2)--------->DREB2C(2) -----HSFB2a(2)<---------RRTF1(2)    ============================HOX2a_HOX2a<--------HAHB4 ---->HSFB2a(2)<---------RRTF1(3)    ------>ZmHOX2a(1) --------->LBD16   --------->YAB1 -ANAC58--------->RAP2.3(1)<---------PCF5  --------->LBD16<------ZmHOX2a(2)--------->ICU4 -ANAC58------>NtERF2 --------->MYB55(2) <---------LBD16<---------ARR14(1) <---------YAB1 <----------DOF2 -------->DOF2--------->ATERF1(1)    ================HOX2a_HOX2a------>NtERF2 <---------YAB1    -----   gtaaagccgcggcggcggcggcggccgttggaccgcttcctccaccggatccgccaccggatccaccgcctttgttcataattatcgctggtcttttgca  2467000                                                 ------>MYB46(1)                                                 ------>MYB83                                                 ----------->RAV1(1)                                               --------->MYB46(3)                                               <---------MYB55(2)                                              --------->ANAC58                                              --------->ANAC46                                              --------->ANAC58                                            <---------ALFIN1                                           --------->MYB46(3)                                          --------->CCA1(2)                                        <-                                          <------ZmHOX2a(2)                                        <-                    --------->At4g35610  --------->AGP1  --------->DAG2                            <-                    <---------At4g35610  <---------ARR14(2)                                        <-                   *TSS                  --------->ARR14(2)                                        --          ----------->GT1                <---------ARR11(3)                                     <----        ---------->DOF2                  --------->ARR11(3)                <------------CBF    <----- --------->MYB52(1)--------->GLK1(2)     <-----------ARR10          <---------YAB1  ---------->DOF2<- ----->DOF2   ---------->DOF2          ----------->ARR10---------->DOF2  <---------YAB1        <-----   aagaaacgaagaaagtaaaagaagctgatggctatgggaagaagatccacccaacaaaaaaaggagcatgatgttagtattgggcctaaagtaatgggct  2467100  --------->ARR14(2)  <---------ARR14(2)  ------->TEIL --------ANAC55(1) --------ANAC58               <---------ZAT18               ----------->HVH21 --------ANAC55(2)    --------->ICU4                      *TSS --------ANAC46       <---------YAB1                <---------ATHB12                 <---------LBD16 ------->ANAC55(2)  --------->YAB1                 ------>MYB83                  <---------At4g35610 -----SPL7<----------DOF2<---------YAB1    <---------HSFB2a(2)                   --------->At4g35610- ----ANAC58         <---------ICU4         --------->HSFB2a(2)                <---------At4g35610   < --------ANAC58    <---------YAB1      <----------DOF2    <----------DOF2<----------DOF2       <----- ----ANAC58        --------->ICU4 <---------MYB59  ------>MYB46(1)   ------>ZmHOX2a(1)         <-----   tacgtatttgtgttttaagttattattattaggggacttaactttctaaaaccaaacatgctttgacattcctctctttcttctgctctcggaattggtg  2467200         --------->ANAC58         --------->ANAC58                                                              <---------ANAC58 -------->HSFB2a(2)                 <---------GLK1(1)                      <---------ANAC58         - ---------HSFB2a(2)                 --------->GLK1(1)             <---------ATHB12     <---------ANAC46 ----REM1(1)                   --------->CCA1(2)          ------>ZmHOX2a(2)<---------ANAC58         < ------RAV1(1)              <---------TOE2(3)     <---------CCA1(2)  ------->TEIL      <---------ANAC58   ttgcagaaggtaagcgattcagacacatctaagatttgatatccctactcttctatctgatccctccaatgaatcttgcttcaattctttcgtattagtt  2467300                ------>ZmHOX2a(2)                        <---------ANAC58              --------->ARR11(3)                    <---------ICU4              <---------ARR11(3)                   ------>ZmHOX2a(1)                                -     <---------At4g35610                       <---------ARR14(2)                            --------     --------->At4g35610                       --------->ARR14(2)                            --------   <-----------RAV1(2)                        ------>MYB83                                 <---------ANAC58  <------ZmHOX2a(2)                           ------>MYB46(1)                          <----------DOF2 -------->At4g35610                         --------->AtMYB61 <---------ANAC46  --------------------- ---------At4g35610     <----------DOF2     ------->GAMYB<---------ANAC58<---------MYB52(1)<---------ANAC58   tcagatcagatgaatagatcgtttctcttttgaaatgttttctcaaccaaatcctaatttcgtcccttgtaatcggtttggagttttgcctttgctagca  2467400                                                                                                   --    ----------->GT1                                                                         <-------GAMYB -------->ATHB12                           <---------TOE1(3)                               --------->ALFIN1 ->ANAC58   --------->TOE2(3)              <---------TOE2(3)                       <---------AHL20(2) ->ANAC58   --------->TOE1(3)         <----------DOF2                   --------->TOE2(3)<---------ANAC46 -->TaNAC69(2)                  <-------TEIL               <---------LBD16        --------->AHL20(2)   attgattagtaaaaccttgaaaggttttgaaagtttcattcttttaatgttattagttaaactcgggtttgcaacttcaatctatttaatcgtgtgttgt  2467500                                                                               <---------YAB1                                                                              <---------AHL20(2)                                                       --------->ZAT14      <---------YAB1                                                       <---------ZAT14      <---------------AGL15                                                --------->ZAT18            <-----------------AGL1                  <---------GLK1(2)             <---------ZAT14            <-----------------AG      <----------DOF2                     <-----------HVH21      <----------DOF2   --------->GLK1(2)          <---------ANAC58  --------->ZAT14  ------>ZmHOX2a(1)             <-----   <---------ARR11(3)         <---------ANAC58  <---------ZAT18------>ZmHOX2a(2)              <------ ------->YAB1     --------->ARR11(3)     <----------DOF2<---------AtLEC2 <---------AHL20(2)   -------   ttcataatctttttgtcttagattttggtgtttcttatgctccctttcagtgcactgtgcattgatcctttgtagtttattattttggaaatagtgtggt  2467600        <---------AHL20(2)       --------->ATHB51       <--------HAHB4       --------->YAB1       <---------ICU4       -------->ATHB1       <---------AHL20(2)       --------->AHL20(2)      <---------ATHB12           --------->MYB52(1)                                         <--------      --------->ICU4         ----------->GT1                                       <------MYB83      <---------ATHB51      --------->DAG2                                    --------->ANAC58 --GAMYB--------->AHL20(1) ---------->DOF2                                    --------->ANAC58<------ ---MYB46(3)     <---------ARR14(2)                 --------->YAB1         ----------->TGA1 <-------- ---->GT1        --------->ARR14(2)   <------ZmHOX2a(1)         --------->ALFIN1   <------MYB46(1)   taaatgcaattattttgcaaatttggaagaaaagttaacaggactggtgaagtatcaaaatttggggttttgctacgatgacgctaggtgctcggcttgt  2467700  Previous    Next  AGI:  At1g07950.1    Description:  surfeit locus protein 5 family protein / SURF5 family protein. similar to surfeit locus protein 5 family protein / SURF5 family protein [Arabidopsis thaliana] (TAIR:AT1G16430.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO64970.1); contains InterPro domain Surfeit locus 5 (InterPro:IPR009332) Range:  from: 2465767    to: 2467019    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g07960.1    Description:  ATPDIL5-1 (PDI-LIKE 5-1); thiol-disulfide exchange intermediate. similar to ATPDIL2-1/MEE30/UNE5 (PDI-LIKE 2-1) [Arabidopsis thaliana] (TAIR:AT2G47470.4); similar to ATPDIL2-1/MEE30/UNE5 (PDI-LIKE 2-1), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT2G47470.3); similar to ATPDIL2-1/MEE30/UNE5 (PDI-LIKE 2-1), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT2G47470.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21804.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxi Range:  from: 2467158    to: 2469136    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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