Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                           <---------AHL20(2)                                                         --------->AHL20(2)                         --------->ICU4               --------->AHL20(1)                       --------->YAB1                 <---------ARR11(3)                       <--------HAHB4               ------->TEIL                                -----          --------->YAB1 <---------YAB1          <---------YAB1                                 <---- ------>YAB1--------->ICU4                    <---------YAB1                                   <----- ------YAB1 <---------YAB1<---------ICU4      --------->ICU4 <---------AHL20(2)                <----- -ZAT6   <-------TEIL  <---------ICU4       --------->YAB1   <---------ICU4     ---------->DOF2------   tcataccaaaattcatgattttgcatcattattttctggcattggatgatgatgaatatataaatatttcgcttatgaaatagaaagccttgctcaaata  2457800      <-------MYC3      ------->MYC3 ---->YAB1 -----ICU4                      --------->DAG2 ----ATHB51                    ---------->DOF2                       --------->DAG2 ----ATHB12                 --------->YAB1              ---------->DOF2         <-----------GT1 --->ICU4          ---------->DOF2     <---------ARR11(3)   ----------->GT1 <---------ARR11(3)   atgaagcacatgagttggacttaaagccaaaaataaggcgagatgtttttttttttgttaaagggtttaataaggcgagatgttaccagtgtatttgaag  2457900                                                                                      <---------ZAT14                               <---------ARR11(3)                                     <---------ZAT18                               --------->ARR11(3)       --------->AHL20(2)       <---------ANAC58                            =====================HOX2a_HOX2a               <----------DOF2                            <------ZmHOX2a(1)       --------->AHL20(2)     <---------DAG2                           <---------At4g35610  <-------TEIL             ------->TEIL --------->ZAT14                         <-----------RAV1(2)   --------->CCA1(2)      --------->ANAC55(2)                  <---------REM1(2)           <---------ARR14(2)      <---------ANAC55(2)                  --------->ZAT18             --------->ARR14(2)     <-------TEIL<---------ANAC58                  --------->ZAT14            --------->At4g35610     --------------->AtSPL3             --------->At4g35610--------->CCA1(2)<---------ANAC55(2) --------------->AtSPL8  -------- <---------ATHB12 <---------ZAT14         <------ZmHOX2a(2)     --------->AHL20(2)    --------->ZAT18   caaatcaatgtaatcagttgtacacaggcaggagatatatagcgatcagatacataaaatatatgtataaatacgtactttttgctagtgctctctacca  2458000                                                                                --------->ARR14(2)                                                                                <---------ARR14(2)                                                                                ------->TEIL                                                                                <---------ARR11(1)                          <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                    <---------CCA1(2)                        <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                     <---------ARR14(1)                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                <---------YAB1             <                       <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)              <---------TOE1(2)           -       <---------ICU4<---------AHL20(2)                         <---------ARR11(3)  ---------->DOF2 <      --------->ICU4<---------AHL20(1)                <---------YAB1    <---------TOE2(2)           -    --------->YAB1  --------->AHL20(2)       --------->ATHB12   --------->ARR11(3)  ================= >P<---------YAB1   <---------AHL20(2)   <-----------GT1 <---------WOX13(1)  ------>ZmHOX2a(2)      <   gcgttttcattatgaagtctaattttttttttttttttttttttaactgatttgttctgatttataaatcttcgtatgatcgtatctaaagagaacatgc  2458100           <---------DOF5.7(2)          --------->WRKY12          ----------->HVH21          ----------->TGA1         --------->DOF5.7(2)       <---------MYB46(3)  <---------MYB52(1)                               ----------->GT1 <-----------HVH21                         --------->ANAC58                ----------->GT1 --------->LBD16                           ----------->GT1               --------->MYB52(1) ---------O2<---------TOE1(3)          --------->LBD16          ------>NtERF2 -------->O2<---------TOE2(3)         --------->HSFB2a(2)       <------NtERF2                    <--- ---------ANAC46         <---------ANAC46  --------->ANAC58    ------>NtERF2----------->GT1 --------- -------->TGA1a       --------->ALFIN1<---------HSFB2a(2)     --------->ATERF1(2)           --------- =========bZIP_DOF<---------ANAC55(2)<---------LBD16          <---------DEAR3(1)      <---------YAB1 ---------TGA1a<---------MYB52(1)   --------->MYB52(1)       --------->ATERF1(1)  <------------CBF <-   tcccgtgagtcgttgacgttaagtatggggggagacattaccggaacgaaaattagtaaaacaggcggccagacataagggtaaaattgtcattacgcta  2458200       --------->TOE2(3)       --------->TOE1(3)      <----------DOF2       --------->YAB1       <---------At4g35610                                     <---------ZAT18 -      <---------YAB1        --------->At4g35610                      <---------AHL20(2)            --     <---------ARR11(3)  <-----------GT1                            <---------AHL20(2)            ---     --------->ARR11(3) <-----------GT1                             <---------AHL20(1)           <--- ------TOE2(3)      <---------DAG2                                  --------->AHL20(1)           ---- >ANAC58      --------->TOE2(3)          *TSS                       --------->AHL20(2)  <---------DAG2 >ANAC58      --------->TOE1(3) --------->REM1(1)        <-----------GT1            --------->ZAT18-- -----ZmHOX2a(1)    <----------DOF2     ----------->TBP <-----------GT1 <-----------GT1 <----------DOF2   aggagattatcttaaaccctaacttttttccgcttcaccactataaatacaaacttgtttacccttccaatttatttctctacttgtccacttttctaca  2458300         ------>ZmHOX2a(1) --------->bZIP60(2)                                                                               <- -------->LBD16                              <----------DOF2                                  <------ ------->RAP2.6(2)               <---------ANAC58                                           <------MYB83 ------>RAP2.3(1)                <---------ANAC58                                           <------MYB46(1) ------At4g35610                 --------->ANAC55(2)                                 <------ZmHOX2a(2) ----->At4g35610                 <---------ANAC55(1)   <---------GLK1(2)    <---------YAB1 --------->MYB111(1) ------->RAP2.3(2)               <---------ANAC46 --------->TOE1(2)      <---------YAB1    --------->MYB59   gccgcatcatccttctcccttgtgcgatatcgtttgcgtgaggttagcttttcatacgattcttcgatttgaattcttattcttccgatcgatttggtag  2458400                   <---------MYB52(1)                 <---------ANAC58                                                      ----------->ARR10                 <---------ANAC58                                                 ------>ZmHOX2a(2)             <---------MYB52(1)                           ------->TEIL          >>>>>>>>>ARR1       <---------SPL7                                     <-----------GT1       >>>>>>>>>ARR2<-------      <---------ANAC58 <---------ANAC58                --------->ANAC46        <------ZmHOX2a(1) ------TEIL <-------GAMYB          <---------ICU4      --------->ANAC55(1)--------->ATHB12--------->GLK1(2) --P  <---------ANAC58 <---------ANAC58          <----------DOF2      <---------MYB46(3) <---------GLK1(2)   attcaatttcgtcccgttgtcgtttgcttcttcttaatcacttctatgcttctttacatgtaactctctgatttgttgataggatcgtttagattctttg  2458500                                             --------->ZAT18                                             --------->ZAT14                                 <---------TOE1(3)                                                  <                                <---------DOF5.7(2)                                               ---                   --------->ATHB12     <---------ZAT14              <---------YAB1               <--       <----------DOF2          --------->MYB52(1)         <----------DOF2              --------->ANAC55(2)       --------------------->WRI1<---------TOE2(3)         <---------GLK1(1)            <---------ANAC55(2)      <---------ANAC46          <-----------GT1           <---------ANAC58           <------ZmHOX2a(2)      <---------ANAC58    <------ZmHOX2a(1)  <---------ZAT14      --------->AHL20(2)--------->ARR11(3)      <---------ANAC58  <---------TOE2(3)    <---------ZAT18    <----------DOF2     <---------ARR11(3) ---DOF2         <-----------------AGL1 --------->ZAT14   <---------ANAC58         <---------At4g35610   attccatggctttgaacttatcgattgaggaaattaacgttctgtagtgcaatcgaactggctttccttttattatttcaaattcagatcatgtaatctg  2458600                                               <-------TEIL                                              <------ZmHOX2a(2)         <----------DOF2        --------->ATHB12      <---------ARR11(3)      <---------WOX13(1)                       ------>ZmHOX2a(2) ---------ARR14(2)    <---------MYB52(1)     --------->AGP1----------->GT1 ------>ETT(2)       <-------GAMYB<---------WOX13(1)      <---------TOE1(3)             <-------TEIL -------ETT(2)      <-----------RAV1(1)<---------MYB46(3) <---------TOE2(3)           --------->TOE2(2)   tcgatctagttctttgaattttctgttgtgcgattgattgtttgttagatccatatgtgtaaggttaaattgatctattggtataatacatacgtttcta  2458700  Previous    Next  AGI:  At1g07930.1    Description:  elongation factor 1-alpha / EF-1-alpha. Identical to Elongation factor 1-alpha (A4) [Arabidopsis Thaliana] (GB:P13905); similar to elongation factor 1-alpha / EF-1-alpha [Arabidopsis thaliana] (TAIR:AT5G60390.1); similar to elongation factor 1-alpha / EF-1-alpha [Arabidopsis thaliana] (TAIR:AT1G07940.2); similar to elongation factor 1-alpha / EF-1-alpha [Arabidopsis thaliana] (TAIR:AT5G60390.3); similar to elongation factor-1 alpha [Nicotiana tabacum] (GB:BAA09709.1); similar to Elongation factor 1-alpha (EF-1-alpha) (Vitronectin-like adhesion protein 1) (PVN1) (GB:P43643); similar to elongation factor 1 alpha [Stevia rebaudiana] (GB:AAN7789 Range:  from: 2458241    to: 2460787    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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