Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <---------ANAC46                        --------->YAB1                        <---------ANAC58                      ------>MYB46(1)                <---------MYB55(2)                --------->MYB46(3)          ------>MYB46(1)          --------->MYB52(1)          ------>MYB83------>MYB83                       <---------TOE2(3)      <---------ARR11(3)<---------ANAC58            <-----------GT1      --------->ARR11(3)----------->GT1     <---------TOE1(3)                <---------ZAT6       <--  ---------->DOF2<---------ALFIN1           <---------TOE2(3)           --------->YAB1         ------   attccaaagacctatcgaaccacctagcgtaatacacatttcaattgaggtttttaactatggtttctcccaaattatagtattaatcttcaattcttca  2442200                                                                                           --------->ANAC55(2)                                                                                           <---------ANAC55(2)                                                                                           --------->ANAC46                                                                                           --------->ANAC58                                                          <---------ICU4     <---------YAB1--------->ANAC58                                                          --------->ATHB12   <---------AHL20(2)                                                         --------->ICU4     --------->AHL20(2)    ---------->DOF2                                      <---------YAB1     <---------AHL20(2)    --- --------->YAB1                                          <---------ATHB12   <---------AHL20(1)   <--- -------ICU4  ---------->DOF2            <---------YAB1 <---------TOE2(3)   --------->AHL20(1)  ----- --->YAB1   <---------YAB1      ----------->GT1    --------->MYB52(1)      --------->YAB1  --------->ANAC55(1)   taatcagaaagactattaaagaatgtaagacgaagagtagaataccattggactaactaatgattttttagagactaatataattgaaactatacgtaag  2442300                                                            --------->AtLEC2                                                            --------->ANAC58                                                           --------->WOX13(1)                                                         --------->WRKY18(1)                                             <------------CBF       --------->ANAC58                    --------->AHL20(2)       --------->ANAC58                    <---------AHL20(2) -------->GT1                              --------->AHL20(1)   --------->MYB52(1) ---ZmHOX2a(1)      <---------AHL20(2)    --------->AHL20(2)--------->ANAC58 ------>GT1   --------->YAB1        ----------->GT1  ---------->DOF2           ---------->DOF2   gagaaaaacaagacaagaagaattttttgtttcttaagaagaaaattaattgtgccaaagtcaagcaaaccgttgaaacatgaaagcgtagagaaattta  2442400                                                        <---------ICU4                                                       <---------YAB1                                                       --------->ICU4                                                  <---------ANAC55(2)                                                  --------->ANAC58                                                  --------->bZIP60(2)                                                  <---------bZIP60(1)             ----------->GT1                      --------->bZIP60(1)          <---------ANAC58                        <---------O2                       <---------At4g35610          <---------O2                            --------->O2                     <---------WRKY38(1)          <---------bZIP60(2)                     <---------TGA1a                <-----------HVH21          --------->ANAC55(2)                     --------->ANAC46              <------MYB46(1)          <---------ANAC55(1)                     --------->ANAC55(2)          <---------AtMYB61          <---------ANAC55(2)                     --------->ANAC58             --------->ALFIN1          <---------ANAC58                        --------->TGA1a          >>>>>>>GRF7          <---------ANAC46                   --------->ANAC58             <-----------RAV1(2)       <---------MYB52(1)                    --------->ANAC58           <-----------HVH21      <-----------HVH21                    =================bZIP_DOF   --------->TGA2(1)    <------NtERF2                          ---------->DOF2      <---------ANAC58<------MYB83   ------>NtERF2                 --------->WOX13(1)<-----------TGA1    <---------bZIP60(1)  --------->DEAR3(1)           ------------>CBF  <-----------STF1      <---------TGA2(1)         ---- --------->MYB46(3)          <----------DOF2 --------->ANAC46   <---------ANAC58<---------MYB46(3) --------->ATERF1(1)         ===============================bZIP_DOF   --------->bZIP60(1)------>ZmHOX2a(1)   gtagccaccgttacgtggaaatatgtttcaactttcaattagcaaaaaagccacgtcataattcgagcttgtgatgtcagggtggtcacctccttcccta  2442500                                         --------->DAG2                                     --------->AtMYB61                                              <                                   ------>NtERF2 <-----------GT1                                   <-       <---------ANAC58           --------->ANAC46                                            <------       <---------ANAC46           <---------ALFIN1                                         --------->LBD16       <---------ANAC58          --------->MYB46(3)                                     ------>ZmHOX2a(1)     <---------ANAC46   <-----------GT1 ---------->DOF2                           <---------At4g35610 ----->REM1(1)      ----------->TBP----------->RAV1(1)   ---------->DOF2          --------->At4g35610   catcattttgtgtgtctcccctatatatacacttccccaccaaaaagcacttcacctctcaaagactctacttacacatttctcatcttcctccccataa  2442600                                                             <-----------ARR10                                                             <---------ARR11(3)                                                       --------->WOX13(1)                                                   --------->ANAC46                                                 <---------ALFIN1                                                 --------->AtMYB61                                              <---------ALFIN1                                              --------->ANAC46                                              --------->DEAR3(1)                                             <------NtERF2   --------->ARR11(3)                    --                                             --------->ATERF1(1)                                   <-                                            <---------ATERF1(1)                                   <--              <------MYB46(1)               ------>NtERF2<---------ATHB12                        <---             <---------AtMYB61             <---------ETT(2)  --------->ARR14(2)            <---------           <-------GAMYB                 <-----------HVH21--------->YAB1            --------->AtMYB61          <---------ANAC46     ----------->HVH21--------->MYB46(3)                 --------->MYB46(3)          <---------ANAC58     ----------->TGA1------>NtERF2 <---------ARR14(2)  <---------ALFIN1---- ---------At5g28300    ----------->GT1  <-----------RAV1(1)  <---------ARR11(1)------>ZmHOX2a(1)----- ----------GT1<------MYB83  --------->DAG2 --------->ETT(2) <---------CCA1(2) --------->ANAC46<------ ---ATHB12<---------ANAC58 ---------->DOF2 --------->bZIP60(1)         ------>ZmHOX2a(1)  <----------DOF2   ttcacagtttttgcgttggtatggagagtaaaagtgacgcttctgtcgccaccactccaatcatatcttcttcctcttctcctccaccatcactttcacc  2442700                               --------->GLK1(2)<---------ANAC46  --------->ALFIN1     <---------ANAC46      --------->ALFIN1  <--------P           <---------ANAC58   <------NtERF2                 --------->ZAT14 <---------MYB52(1)    <---------ANAC58  ------>NtERF2                --------------->AtSPL8  ------>NtERF2 ------->LBD16     <---------At4g35610  --------->DEAR3(1)  <---------ANAC58               --------->ATERF1(1) --------MYB46(3)  --------->At4g35610  ----------->HVH21   <---------ANAC46               <---------LBD16 -------ANAC46    --------->ALFIN1      <---------DEAR3(1)  <---------ANAC58               ------>ZmHOX2a(2) ------LBD16      <-----------RAV1(1)  --------->ATERF1(1) <-------TEIL--------->DEAR3(1) <------ZmHOX2a(2) --HVH21         ------->MYC3  --------->ARR14(3)       --------->CCA1(2) --------->SPL7 --------->ARR14(2) ----->LBD16     ------->MYC2  <---------ARR14(3)--------->ZAT18      --------------->AtSPL3 -------- ---->DEAR3(1)   <-------MYC2  --------->ARR11(3)<---------ZAT14      <------NtERF2      <---------ARR14(2) ---At5g28300    <-------MYC3  <---------ARR11(3)--------->ZAT14     ------>NtERF2  --------->MYB52(1)   gcgggtagtgcttagtccatgtgctgcttgcaaaatcttgaggcgacgttgtgcagagagatgcgttttggcaccgtacttccctccaacggatccggcc  2442800                                             <---------ARR11(3)                                      <---------ICU4               --------->DEAR3(1)  --------->REM1(1)      <---------MYB59            <---------ALFIN1     ----------->RAV1(1)      --------->TOE2(3)            --------->ANAC46   <------NtERF2 --------->ARR11(3)          <---------ARR11(3)    <---------YAB1            --------->ANAC58      --------------->AtSPL8 --------->ZAT14              --------->ANAC46      <---------------AtSPL3              <---------ICU4 <---------ZAT14              --------->ANAC58 <---------ANAC58          --------->ARR11(3)         < --------->ZAT18     <----------DOF2 <---------YAB1 <---------------AtSPL8             --------->ICU4 <---------ZAT18--------->LBD16--------->At4g35610  <---------TOE1(2)   <---------CCA1(2)        ---- ->LBD16 <---------ZAT18    --------->ATERF1(1)<---------ANAC58  <-----------GT1  ----------->GT1<---   aagttcactattgcacaccgcgtctttggagccagcaacatcattaagttcttgcaggtacctaaattatctatatatctattggtgtaataactataag  2442900                                                   >>>>>>>>>>GT-1                                                   --------->ARR11(3)                          ------                                                  --------->YAB1                           <-------TEIL                                                <---------TOE2(3)                         --------->CCA1(2)                            ---------->DOF2    --------->YAB1              ---------->ID1--------->ARR14(2)                          <---------TOE2(3)  <---------AHL20(2)        <---------ANAC58  <---------ARR11(3) ----------DOF2           <---------YAB1    --------->YAB1             <---------ANAC58  <---------ARR14(2) ----->ARR11(3)       --------->TOE2(3) <---------AHL20(2)       --------->ATHB12    <------ZmHOX2a(1) ------ARR11(3) <---------ICU4         --------->AHL20(2)       --------->ICU4<---------YAB1   ------   ctctttagttcttagaaagaattacattaagaaagacccgattttatattaatgatatagatgggaatgattttcttgttcttattaggaagatacatat  2443000                                                           <---------AHL20(2)       --------->AHL20(2)                                                     --------->ANAC55(2)            --------->YAB1                                                     <---------ANAC58               <---------ICU4            <---------LBD16                          <---------ANAC58               <--------ATHB1        <---------MYB46(3)         ----------->GT1   <---------ANAC55(2)            --------->ATHB51       <--------P    ----------->GT1                 <---------ANAC46              <---------ATHB51 --->AHL20(1)<---------HSFB2a(2)   <---------ANAC55(2)  ----------->GT1--------->ZAT6             --- --->ARR11(3)<---------ANAC46  <-----------HVH21 <---------DAG2   --------->YAB1   <---------ATHB12   attgaaatggttgtttcggaaaatggtttcataggtcatgtgaaaattggaccttacgtagttatttgtcataagactaatgtcaataatttcttctcac  2443100  Previous    Next  AGI:  At1g07900.1    Description:  LBD1 (LOB DOMAIN-CONTAINING PROTEIN 1). Identical to LOB domain-containing protein 1 (LBD1) [Arabidopsis Thaliana] (GB:Q9LQR0); similar to LBD11 (LOB DOMAIN-CONTAINING PROTEIN 11) [Arabidopsis thaliana] (TAIR:AT2G28500.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78080.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO69005.1); contains InterPro domain Lateral organ boundaries, LOB (InterPro:IPR004883) Range:  from: 2442621    to: 2443628    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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