Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 <-----                                                                                              <------                                                                                              <------                                       --------->ARR14(2)                                    --------                                       <---------ARR14(2)                                   <--------                                 --------->TOE1(2)                                         <---------MYB46(3)                      --------->ARR14(2)        <---------------AtSPL8                    <---------ANAC46                      <---------ARR14(2)        <---------------AtSPL3                    <---------ANAC58                   <---------ALFIN1 --------->ANAC46                                      <---------ANAC58                  --------->LBD16--------->TOE2(2)                                        <---------RAP2.6(2)         --------->TOE2(3)      --------->MYB46(3)  --------->SPL7  ---------->DOF2       <---------DREB2C(2) ->LBD16 --------->TOE1(3)    <-----------GT1   --------------->AtSPL8              <-------TEIL ----   acttgcataaaccctaatcccccaaatcggattaacctccgaaaccgtagagagtacgaccttgcctcttcaaagcgtagacaacatccatggcggtcac  2421500                                     --------->ANAC58                                     <---------ANAC55(2)                                     --------->ANAC55(2)                                     --------->ANAC58                                    <---------LBD16                                   --------->MYB52(1)             <------ZmHOX2a(1)                                  <------NtERF2             =============HOX2a_HOX2a                                 ------>NtERF2              ------>ZmHOX2a(2)                                 <-----------HVH21         ==============HOX2a_HOX2a                                 <-----------TGA1          <------ZmHOX2a(2)                         <---------MYB52(2)               <---------ARR11(3)                        --------->ANAC58                  <---------ARR14(2)                        --------->ANAC58 ----------->HVH21<---------ARR14(3)                    <---------ZAT6----------->HVH21       --------->ARR11(3)            --------->ZAT18     --------->bZIP60(1)       --------->ARR14(3)            <---------ZAT18     <---------bZIP60(1)       --------->ARR14(2) ----At5g28300    <---------ANAC46--------->ATERF1(1)     <---------AGP1 ---WRKY12 <---------ANAC46     --------->bZIP60(2)     ----------->ARR10 ---WRKY38(1) <---------ZAT2  ------->GAMYB           <------ZmHOX2a(1)                             < --->HVH21 <---------ANAC58 <---------At5g28300       =============HOX2a_HOX2a                ------- ---HVH21  <---------ANAC58--------->MYB52(1)    <---------HSFB2a(2)                          <------ ----->DEAR3(1)   --------------------->WRI1     --------->HSFB2a(2)    --------------------->WRI1  -   cgtcttccttctagcgtgctcagtgtaagtaacggcgtcacggatgacattctcgaggaagatcttgaggacacctctggtctcttcgtagatgagacca  2421600                --------->AtMYB61                <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)             --------->AtMYB61                                                    ------>ZmHOX2a(1)             <---------ALFIN1                                                   ----------->RAV1(2)       ----------->HVH21                               <---------ANAC58        ------>MYB83   --------->ANAC58                                    <---------ANAC46        ------>MYB46(1)   --------->ANAC58    --------->ANAC58                <---------ANAC58     --------->HSFB2a(1) ---------ARR14(2)     --------->ANAC46        <------MYB46(1)              <---------HSFC1(2) -->ZAT18 --------->ANAC46                     <------MYB83                 --------->HSFC1(2) ---ZAT14 --------->bZIP60(1) <----------ID1<---------ANAC58                <---------HSFB2a(1)   --- -------->ARR14(2)     --------->ANAC58     <---------ANAC58              <---------GLK1(2)      <---   ctgatacgcttgacaccacctctacgagcaagacgacgaatggcaggcttggtgattccttgaatgttatccctcagaaccttcctgtgcctcttcgctc  2421700                                                                      --------->CCA1(2)                                                                      <------ZmHOX2a(2)                                                                     <---------ARR11(3)                                                                     --------->AGP1                                            --------->ZAT14          <---------ARR14(2)                                   ------>NtERF2                     <---------AGP1                                  --------->LBD16                    --------->ARR14(2)                                  --------->ANAC46                 ----------->ARR10             ------>ZmHOX2a(1)    <---------ETT(1)     --------->ANAC55(2)          <---------ATHB12       <---------HSFB2a(2)   <---------ANAC58   ----------->HVH21         --------->ARR14(2)      --------->HSFB2a(2)   <---------ANAC58------>ZmHOX2a(2)  <----------DOF2      <----------DOF2      <---------ZAT14      ---------->DOF2 <---------DAG2       <---------DAG2 --------->bZIP60(1)      --------->ANAC58 --->ZmHOX2a(1)    ------>ZmHOX2a(1) <---------bZIP60(1)      --------->ANAC58   --------->REM1(2) ------ALFIN1<----------DOF2------>ZmHOX2a(1)        <-----------GT1 --------->ARR11(3)   ctccctttcccaatccttttcctccctttcctcttcccgacatcacttcacagttttacttgatacccaaagatctgtgactgtgaagaacagaagaaaa  2421800                                 <---------GLK1(1)                                 --------->GLK1(1)                                <---------GLK1(2)                       <---------GLK1(2)                       <---------ARR14(2)                       --------->ARR14(2)                                                       <----                  --------->MYB52(1)                                                        ---------                 ------->GAMYB  <---------ARR11(3)                                          ---------                <---------MYB52(2)       <---------ATHB12              <-----------GT1      <--------                --------->MYB46(3)  ----------------->AG <---------TOE2(3)                  <--------           --------->YAB1 --------->ANAC58   <---------ATHB12         ---------->DOF2     -----------           ----------->GT1--------->ANAC58 --------->WOX13(1)<------ZmHOX2a(2)        >>>>>>>>>TBF1   attattcagtgaatggtaacgaacagaaacgctagatttccaaatcaatcaattgaattgacgatcgaacaataaaccagatggagaagaagaagatact  2421900                                                                                     --------->LBD16                                                                                    <---------ANAC46                                                                                    <---------ANAC58                                           <---------bZIP60(2)                      <---------ANAC55(2)     --------->ATHB12                   *TSS                                   --------->WRKY12    <---------YAB1                    --------->CCA1(2)                        ----------->ARR10 ------DOF2                           --------->GLK1(1)                        --------->WRKY38(1) >ARR11(3)                        <---------ANAC46                           <-------GAMYB >ARR14(2)                       <---------LBD16                            <---------ANAC46 -ARR11(3)                     ----------->HVH21                  ----------->TBP   <---------ANAC55(1) -ARR14(2)          <------ZmHOX2a(2)--------->ARR14(2)          --------->AHL20(1) <---------ANAC58 >ARR10           <------ZmHOX2a(1)  <---------ARR14(2)          <---------AHL20(1)------>ZmHOX2a(2)   tttaagatgatttggagagaggatcaattgaatttgacggatatgaagtggctaactaatgtcttaatatataaaactgcgttgatccgtgtgatttttc  2422000                                                             <---------ANAC58                                                             <---------ANAC46                                                             ===================================bZIP_DOF                                                             <---------O2                                                             <---------ANAC58                                                             --------->O2                                                             <---------TGA1a                                                             <---------bZIP60(2)                                                            ----------->STF1                                                           <---------TGA2(2)                                                --------->MYB52(1)                                               ----------->HVH21   <---------WOX13(1)    <---------ARR11(3)                                             --------->ANAC55(2)  <---------ANAC58       --------->ARR11(3)                                             <---------ANAC55(2)  <---------ANAC58   ---------->DOF2                        ----------->GT1 --------->ZAT6<------ZmHOX2a(2)           <---------WOX13(1)                        --------->YAB1<---------DOF5.7(2) ----------->TGA1     --------->AHL20(2)                   ------------>CBF--------->TOE2(3) --------->ARR14(2)        <---------AHL20(2)                   ------>ZmHOX2a(2)--------->DOF5.7(2)   ----------->HVH21   --------->AHL20(2)       <---------MYB52(1)          --------->TOE1(3) <---------ARR14(2)       <---------AHL20(2)    --------->MYB46(3) <---------ATHB12------------>CBF------>ZmHOX2a(2)      <---------AHL20(1) <---   atatcaaccgttgattactgatccaatggttatacatcgttaacaatacttgacggatcgatgacgtggattgctcccaatttaattgaaagatgttgtt  2422100                                               <-----------RAV1(1)                             <-----                                               --------->ALFIN1                                ------                                     --------->ATHB51                                         <------                                     <--------ATHB1 <------MYB83                              <------                                     <---------ICU4--------->MYB59                         <---------                                     --------->AHL20(2)                                    ----------                                     <---------AHL20(2)                                   -----------                                    --------->ICU4 <---------MYB46(3)                     -----------                                    <---------ATHB12<------MYB46(1)                       ----------- ------AHL20(2)                     <---------ATHB51<---------ANAC46 ---------->DOF2----------->RAV1(2)   ttattgaaaaacaaaacaaaaacagcattcgtcttccaataatttgcaagtgttgggtcttattaggccttaaaagagaaaatgaaacctggcccaataa  2422200  ------------>CBF ---ATHB1 --->YAB1 ---ATHB12                               <---------ANAC58 ---ATHB51--------->MYB52(1)             <---------ANAC58 ------AGL15                          *TSS                  <---------YAB1 ----->AGL15               --------->ZAT18     --------->ANAC46<---------LBD16 ------>AGL3               <---------ZAT18    <---------LBD16  --------->HSFB2a(2) ->CBF --------->YAB1 <------------CBF<-----------GT1    <---------MYB52(1) ------>AGL2   --------->AGP1    ---------->DOF2--------->LBD16<---------HSFB2a(2)               <---   tagtatcaatactaacagagctagtattgggccctaaaagtttccgtctccgtaaacctgttattctcggagaaacgttgagagagggttttccattctc  2422300                 ----------->HVH21                --------->At5g28300               <---------ANAC46              <------NtERF2             ------>NtERF2            <---------DEAR3(1)            --------->DEAR3(1)                                                                 ------           --------->ATERF1(1)                                                                <------ZmHOX2a(2)          <---------ATERF1(1)                                                                <-------          <-----------HVH21                                                             <---------ZAT14         --------->DEAR3(1)                                                             --------->ZAT18     <------NtERF2                                                                      <---------REM1(2)     ----------->HVH21                                                                <---------ZAT14     --------->ATERF1(1)                                                              <---------ZAT18    <---------RAP2.6(3)                                                               --------->ZAT14    <---------ATERF1(1)                      <---------MYB52(1) <---------At4g35610   --------->REM1(2)    <-----------HVH21                        <-----------HVH21  ------>ZmHOX2a(1)   --------------->AtSPL8   --------->ANAC46                         --------->LBD16     =====================================HOX2a_HOX2a   --------->RAP2.6(2)                    <---------LBD16 <---------AHL20(2)       <---------ANAC46 --------RAV1(1)--------->LBD16------>ZmHOX2a(1)     <---------YAB1           <----------DOF2--------   tgtggccgtcaccgtcgccgtgaaatagctctcctctctctatctccggtgagttcttatttattcctctgcgagatgtgcttttctgtgtacacgatct  2422400  Previous    Next  AGI:  At1g07820.1    Description:  histone H4. Identical to Histone H4 [Arabidopsis Thaliana] (GB:P59259;GB:P02308); similar to histone H4 [Arabidopsis thaliana] (TAIR:AT5G59690.1); similar to histone H4 [Arabidopsis thaliana] (TAIR:AT5G59970.1); similar to histone H4 [Arabidopsis thaliana] (TAIR:AT3G53730.1); similar to hypothetical protein OsJ_028319 [Oryza sativa (japonica cultivar-group)] (GB:EAZ44836.1); similar to histone 4 [Elaeis guineensis] (GB:ABD62753.1); similar to histone H4 [Hyacinthus orientalis] (GB:AAT08725.1); contains InterPro domain Histone H4; (InterPro:IPR001951); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histon Range:  from: 2421215    to: 2421940    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g07830.1    Description:  ribosomal protein L29 family protein. similar to unknown [Populus trichocarpa] (GB:ABK93723.1); contains InterPro domain Ribosomal protein L47, mitochondrial; (InterPro:IPR010729); contains InterPro domain Ribosomal protein L29; (InterPro:IPR001854) Range:  from: 2422238    to: 2423652    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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