Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                         --------->GLK1(2)                                                                      --------->ARR14(2)                                                                      <---------ARR14(2)                                                                      <---------GLK1(2)                                                                    ----------->ARR10       <----------ID1                                             <------ZmHOX2a(2)    ------------------------>ANAC81     <---------ALFIN1         --------->ARR14(2)          <------ZmHOX2a(2) ----------->GT1       --------->WOX13(1)                        <---------ARR14(2)         --------- ---------------------WRI1     <---------At4g35610              --------->At4g35610         <-------- --->ANAC58     ---------->DOF2--------->ZAT2           --------->HSFB2a(2)        <---------ZAT14 --->ANAC58---------->DOF2     --------->At4g35610      <---------HSFB2a(2)        --------->ZAT14   caagagaaaaaaacaaagtaaagaccaattagcagctatctcacacttctgaatatttctataagcagatcagattctgaacgactatagtgaagatcaa  2412600                <---------At4g35610                 --------->WOX13(1)        --------->ATHB12                         --------->ANAC58       <---------TOE2(3)    --------->ANAC58     --------->ANAC58       <---------YAB1       --------->ANAC58    --------->DAG2   --------->TOE1(3)    --------->ANAC58       ---------->DOF2              <---------At4g35610   --------->TOE2(3)    --------->ANAC58 <---------ANAC46                   --------->At4g35610  <--- ------->TEIL   --------->At4g35610    --------->MYB52(1)                 *TSS                 <----- >ARR11(3)      <---------ZAT2        ----------->HVH21               --------->DAG2           <----- -ARR11(3)      --------->ZAT2        ----------->TGA1      <------ZmHOX2a(1)              ----------   ttgtaccttaagattgggagctcgagaggcaaggtactcagtgacggagaaaagcaattagaggaagaagagaaggtgagctagagttttcttatcgctt  2412700                                                         <-------TEIL                                                     --------->ANAC58                                                     --------->ANAC58                                              <---------ANAC46                                 <-------MYC3 <---------ANAC58                         --------->ANAC58 --------TBP               ----------->HVH21  <---------ANAC58                     <-----------HVH21 ----DAG2                <------------CBF --------->At4g35610                   <----------DOF2 -----DOF2     ---------->DOF2   ------->MYC3------>NtERF2                   <----------DOF2 >ID1  ----------->GT1------------>CBF    <---------At4g35610       ------------>CBF   --------->ANAC58   tttatactagggaaaatcaaagaaaccaattgacatgtgttatgcgctgcgtctcaagcttcatttcaggcccaatgggcttctttgtcacgaccattga  2412800                                                           ------>ZmHOX2a(2)                                                          <------ZmHOX2a(2)                                                         --------->AGP1                                                         <---------AGP1                                                         --------->ARR14(2)                                                         <-----------ARR10                                                         <---------ARR14(2)                                                         <---------ARR11(3)                                                         --------->ARR11(3)                                                        <---------CCA1(2)                                                        --------->At4g35610                                                     <---------MYB52(1)                                                     <------NtERF2                                                    <-----------HVH21                                                   --------->ATERF1(2)                                                   --------->RAP2.3(2)                                                   <---------ATERF1(2)                                                 --------->At4g35610               <---------TOE2(3)                                                 --------->ZAT2                   <-----------GT1                            --------->ICU4       <---------At4g35610        <---------AHL20(2)     ---------->DOF2   ----------->GT1<---------YAB1<---------RAP2.6(3)     --------->AHL20(2)   ----    --------->YAB1  ------->TEIL    --------->YAB1 --------->RAP2.3(3)   --------->YAB1          <---   agcctatcaaagctataacttgaacctgtaaaaatgaatgatgtttctctcagccgtcagatctaatttgagcattgataaatttaacgaatgagaaata  2412900           ------>ZmHOX2a(2)         --------->ARR11(3)         <---------ARR11(3)        --------->YAB1       <---------ATHB12   ------------>CBF  <-----------HVH21 --------->ANAC46 --------->ANAC55(1) --------->ANAC58                                                          --------->YAB1 --------->ANAC58                                          <---------AHL20(2)<---------YAB1 --------->O2                                             --------->AHL20(2) *TSS <---------O2                ------------>CBF            ----------->TBP   <-----------GT1 --------->TGA1a      --------->GLK1(1)       ---------->ID1 --------->ARR11(3) --------->bZIP60(2) <---------ARR11(3)     <---------MYB46(3)          --------->YAB1   --------->ZAT14 ----->CCA1(2)       --------->ARR11(3)     --------->MYB52(2)         <---------YAB1    <---------ZAT14 --------GT1 ------>ZmHOX2a(1)            <---------MYB52(1) <---------ARR11(3)      --------->ZAT6--   tacacgtcaatgatcctcgtgaagatttctatccaatagaatacgtttgttccttctctataaaatctaaactattatcaccattcaccactaaactact  2413000                                                                                        <----------CDC5                                                                                       ------>NtERF2                                                                                       <---------At4g35610                                                                                      --------->RAP2.3(2)                                                                                      --------->DEAR3(1)                                                                                   ------->GAMYB                --------->LBD16                                                    --------->DEAR3(1)               --------->HSFB2a(2)                                                --------->DEAR3(2)               <---------HSFB2a(2)                                      ------>NtERF2--------->RAP2.3(1)              <---------LBD16 ----------->GT1                           --------->LBD16--------->At4g35610          <----------DOF2   ---------->DOF2                            --------->DEAR3(1)          <---------DAG2 --------->YAB1         <------NtERF2         <------NtERF2--------->ANAC46 < <---------ATHB12      XXXXXXXXXXXXXXXXXXXXX>MIR2933A/B              ------>NtERF2--------->MYB46(3)- ------->WOX13(1)--------->LBD16               ------>NtERF2         <------NtERF2<------------AtMYB77   tcaatcaacttccttttcccgagaaaatcagaaagaaaattcacgatggcaccaagagccgagaagaagcccgccgagaaaaaaaccgccgctgagagac  2413100                                   <------NtERF2                                  --------->LBD16                                 <---------DEAR3(1)                                 <---------ANAC46                                <---------LBD16                              <---------DEAR3(1)                             <---------LBD16                             --------->ATERF1(1)           --------->ARR11(3)                             <------NtERF2               --------->ANAC58                            <---------ATERF1(1)          --------->ANAC58         ----------->HVH21                        --------->DAG2               <------NtERF2              ----------->GT1                 <---------At4g35610                --------->LBD16             --------->At4g35610                 --------->ZAT2--------->LBD16     <---------DEAR3(1)          <---------DEAR3(1)                 <---------ZAT2------>NtERF2       <---------ANAC46   ---------->DOF2       <----------ID1 ---------->DOF2       --------->ANAC58         --------->AtMYB61      >>>>>>>>>TBF1 ---------------------WRI1 <---------ARR14(2)      --------->ALFIN1------>NtERF2--------->LBD16 -------->ALFIN1 --------->At4g35610        --------->ANAC58     ----------------->AGL1     <--------   cggtggaagagaacaaggctgctgaaaaggctccggcggagaagaaacccaaggcggggaagaaattgccaccaaaggaagccggtgacaagaagaagaa  2413200                                  <---------ARR11(3)                              ------>ZmHOX2a(2)                             --------->CCA1(2)                                    ---------->DOF2                             <------ZmHOX2a(2)                                 --------->ANAC46                            <---------ARR11(3)                                 --------->AtLEC2                            --------->ARR11(3)                                 --------->ANAC58                            --------->ARR14(2)                           --------->GLK1(1)                            <---------ARR14(2)                     --------->MYB52(1)                            <-----------ARR10                     <---------GLK1(1)                            --------->AGP1                        --------->CCA1(2)                            <---------ARR14(3)                    --------->GLK1(1)                            --------->ARR14(3)                   --------->ARR14(2)                       -------->P--------->REM1(1)               <---------ARR11(3)                       ------>MYB46(1)                           --------->ARR11(3) --------->ANAC58           <-----------------------TaNAC69(2)            <-------TEIL   <---------GLK1(2)         <-- <------ZmHOX2a(2)     ------>MYB83          --------->At4g35610 <---------ARR14(2) --------->ANAC58 -------------WRI1   --------->TOE1(2)      --------->ALFIN1   --------->LBD16 --------->ANAC58------   gcgatctaagaaaaacgtcgaaacctacaagatctacatcttcaaggtgctgaagcaggttcatccagatatcggaatttcaagcaaagccatggggatt  2413300                                          --------->HSFC1(2)                                          <---------HSFC1(2)                                          --------->HSFB2a(1)                                         --------->ARR14(2)                                         <                                         <---------KAN4(2)                                         --                                         --------->GLK1(2)                                         --                                    <---------LBD16                                             -----                                 <---------ZAT2                                                 <----                                 --------->ZAT2                                                 <----                                 <---------At4g35610                         --------->AtMYB61-------                        <---------HSFC1(1)<---------HSFB2a(1)       ---------->DOF2           =======                        --------->HSFB2a(2)                   --------->REM1(1)               <------ZmHOX2a(2)                        <---------HSFB2a(2)          --------->ANAC58     --------->ORA47(1) <-------                    <---------ARR14(2)  <---------GLK1(2)    <-------TEIL ------>NtERF2      --------               ------->GAMYB--------->GLK1(2)<---------------------WRI1  --------->DEAR3(1)  --------       <-------TEIL --------->ARR14(2) <------ZmHOX2a(1)  <------MYB46(1)--------->RAP2.6(2) <------- -------YAB1   ----------->RAV1(1)  <-----------RAV1(2)   <------MYB83  --------->DEAR3(2)   -------- --->ICU4     --------->ANAC46   --------->At4g35610 --------->ANAC58  --------->At4g35610  ---------   atgaacagtttcatcaacgacatattcgagaagctagctcaggaatcttcgaaactcgctaggtacaacaagaagccgaccattacatctcgcgagatcc  2413400    <---------MYB46(3)   <---------DEAR3(1)  --------->At4g35610  <---------At4g35610 ---------DEAR3(1) ------->RAP2.6(3) ------->SPL7 ---->HSFB2a(2) -----HSFB2a(2) -------RAV1(2)           <---------ZAT18 -->CCA1(2)               <---------ZAT14                         <---------ARR14(2) ========================HOX2a_HOX2a                             <-------GAMYB --ARR11(3)               --------->ZAT14                        --------->At5g28300               <- ->ARR14(2)            --------->LBD16      ------>NtERF2       <---------MYB46(3)                 <- ->ARR11(3)           --------->LBD16      --------->DEAR3(1)   <---------DEAR3(2)                <-- --ARR14(2)          <---------LBD16    --------->ANAC46       <---------DEAR3(1)                ---- ->AGP1              --------->LBD16    --------->ANAC58     ------------>AtMYB77              <----- >GLK1(1)         ------>ZmHOX2a(1)     --------->ANAC58     ------------>MYB.PH3(1)        <--------   agacggctgtgagactcgtcctccccggtgaactcgctaaacacgccgtctctgaaggtaccaaggcggttaccaagtttactagctcttgaagagaccc  2413500  Previous    Next  AGI:  At1g07780.1    Description:  PAI1 (PHOSPHORIBOSYLANTHRANILATE ISOMERASE 1); phosphoribosylanthranilate isomerase. similar to PAI2 (PHOSPHORIBOSYLANTHRANILATE ISOMERASE 2), phosphoribosylanthranilate isomerase [Arabidopsis thaliana] (TAIR:AT5G05590.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41379.1); contains InterPro domain Ribulose-phosphate binding barrel; (InterPro:IPR011060); contains InterPro domain N-(5' (InterPro:IPR001240); contains InterPro domain Aldolase-type TIM barrel; (InterPro:IPR013785) Range:  from: 2410117    to: 2412674    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g07790.1    Description:  HTB1; DNA binding. Identical to Histone H2B.1 [Arabidopsis Thaliana] (GB:Q9LQQ4;GB:Q8L950); similar to H2B/HTB2 (HISTONE H2B), DNA binding [Arabidopsis thaliana] (TAIR:AT5G22880.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78863.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H2B; (InterPro:IPR000558) Range:  from: 2412977    to: 2413705    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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