Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          --------->ARR14(2)                                                     <---------AHL20(2)                                            <---------ANAC46                                            <---------ANAC58                                            <---------ANAC58                                        <---------ANAC58<---------ARR11(3)                                        <---------ANAC58<---------ARR14(2)                               ------->GAMYB----------->GT1   ---------->DOF2                              <---------MYB52(2)     --------->AHL20(2)                             -         ------>ZmHOX2a(1)    --------->MYB46(3)--------->AHL20(2)                              <---- ---------At4g35610 --------->ANAC58  <---------ARR11(3)--------->GLK1(2)                    -------- -------->At4g35610 --------->ANAC58  --------->ARR11(3)--------->ARR11(3)             --------->ZAT18   taagctcaatcctctactaaacaagtcaaacaacaaacaagagcttgcgttaaaataaaatctgcaaagcactaaaaatttgatacaaatgcacagattt  2412300                                                                                            ---------                                                                                           --------->HSFB2a(2)                                                                                           <---------HSFB2a(2)                                                                                     --------->TGA1a                                                                                     <---------ANAC58                                                                                     <---------TGA1a        ------->TEIL                                                                 <---------ANAC46     <---------YAB1                                                                  <---------O2   <---------ICU4            --------->WOX13(1)                                  --------->ARR11(3)   --------->YAB1           <---------AHL20(2)                                   <---------ARR11(3)  --------->ICU4      --------->YAB1                                         ==================bZIP_DOF -------->YAB1   <---------AHL20(2)      <---------AHL20(2)                  ---------->DOF2--------- -------GT1  <---------AHL20(2)      <----------DOF2            --------->HSFB2a(2)  <---------ANAC58 ->ARR14(2)  --------->AHL20(2)<---------ATHB12                 <---------HSFB2a(2)  --------->O2   actcatcatgaatatttatttcaatgggaataaatcaagcttttaaaatgtaaaccgaaatcacttatagaaattgaaacaaaggtctcgtgtccagaaa  2412400                                                                                          <---------ANAC46                                                                             --------->TOE2(3)                                                               ---------->DOF2------>ZmHOX2a(1)                                                             --------->YAB1 ------>ZmHOX2a(2)                                                            <---------YAB1 <------ZmHOX2a(2)                                                      <---------ZAT14     <---------ARR14(2)                                                      --------->ZAT18     --------->ARR14(2)        < >LBD16                                 --------->DAG2<---------ZAT18     <---------ARR11(3)   ------ -->GT1                                ---------->DOF2--------->ZAT14     --------->ARR11(3)   ------   atacacacacagacaaaatagagctaagactgactaattcgaaaagcgttcttaagttcactatgaaaagctctaagatcctaaattttctgatgtgaag  2412500                                                                       --------->GLK1(2)                                                                      <---------GLK1(2)                                                                      <---------ARR14(2)                                                                      --------->ARR14(2)                                                                    ----------->ARR10       <----------ID1                                             <------ZmHOX2a(2)    ------------------------>ANAC81     <---------ALFIN1         --------->ARR14(2)          <------ZmHOX2a(2) ----------->GT1       --------->WOX13(1)                        <---------ARR14(2)         --------- ---------------------WRI1     --------->ZAT2                   --------->At4g35610         <-------- --->ANAC58     ---------->DOF2<---------At4g35610      <---------HSFB2a(2)        --------->ZAT14 --->ANAC58---------->DOF2     --------->At4g35610      --------->HSFB2a(2)        <---------ZAT14   caagagaaaaaaacaaagtaaagaccaattagcagctatctcacacttctgaatatttctataagcagatcagattctgaacgactatagtgaagatcaa  2412600                --------->ZAT2                      --------->WOX13(1)        --------->ATHB12                         --------->ANAC58       <---------TOE2(3)    --------->ANAC58     --------->ANAC58       <---------YAB1       --------->ANAC58    --------->DAG2   --------->TOE2(3)    --------->ANAC58       ---------->DOF2              --------->At4g35610   --------->TOE1(3)    --------->ANAC58 <---------ANAC46                   <---------At4g35610  <--- ------->TEIL   <---------At4g35610    --------->MYB52(1)                 *TSS                 <----- >ARR11(3)      --------->At4g35610   ----------->TGA1                --------->DAG2           <----- -ARR11(3)      <---------ZAT2        ----------->HVH21     <------ZmHOX2a(1)              ----------   ttgtaccttaagattgggagctcgagaggcaaggtactcagtgacggagaaaagcaattagaggaagaagagaaggtgagctagagttttcttatcgctt  2412700                                                         <-------TEIL                                                     --------->ANAC58                                                     --------->ANAC58                                              <---------ANAC46                                 ------->MYC3 <---------ANAC58                         --------->ANAC58 --------TBP               ----------->HVH21  <---------ANAC58                     <-----------HVH21 -----DOF2               <------------CBF <---------At4g35610                   <----------DOF2 ----DAG2      ---------->DOF2   <-------MYC3------>NtERF2                   <----------DOF2 >ID1  ----------->GT1------------>CBF    --------->At4g35610       ------------>CBF   --------->ANAC58   tttatactagggaaaatcaaagaaaccaattgacatgtgttatgcgctgcgtctcaagcttcatttcaggcccaatgggcttctttgtcacgaccattga  2412800                                                           ------>ZmHOX2a(2)                                                          <------ZmHOX2a(2)                                                         <---------ARR14(2)                                                         <---------ARR11(3)                                                         --------->ARR11(3)                                                         --------->AGP1                                                         <-----------ARR10                                                         --------->ARR14(2)                                                         <---------AGP1                                                        --------->At4g35610                                                        <---------CCA1(2)                                                     <------NtERF2                                                     <---------MYB52(1)                                                    <-----------HVH21                                                   --------->ATERF1(2)                                                   <---------ATERF1(2)                                                   --------->RAP2.3(2)                                                 --------->At4g35610               <---------TOE2(3)                                                 <---------At4g35610              <-----------GT1                            --------->ICU4       --------->ZAT2             --------->AHL20(2)     ---------->DOF2   ----------->GT1<---------YAB1<---------RAP2.6(3)     <---------AHL20(2)   <---    --------->YAB1  ------->TEIL    --------->YAB1 --------->RAP2.3(3)   --------->YAB1          ----   agcctatcaaagctataacttgaacctgtaaaaatgaatgatgtttctctcagccgtcagatctaatttgagcattgataaatttaacgaatgagaaata  2412900           ------>ZmHOX2a(2)         <---------ARR11(3)         --------->ARR11(3)        --------->YAB1       <---------ATHB12   ------------>CBF  <-----------HVH21 --------->ANAC55(1) --------->ANAC46 --------->ANAC58                                                          <-----------GT1 --------->O2                                              <---------AHL20(2)<---------YAB1 <---------O2                                             --------->AHL20(2) *TSS --------->TGA1a             ------------>CBF            ----------->TBP   --------->YAB1 --------->bZIP60(2)  --------->GLK1(1)       ---------->ID1 --------->ARR11(3) --------->ANAC58    --------->ARR11(3)     <---------MYB46(3)          --------->YAB1   <---------ZAT14 --------GT1 ------>ZmHOX2a(1)              --------->MYB52(2)         <---------YAB1    --------->ZAT14 ----->CCA1(2)       <---------ARR11(3)   <---------MYB52(1) <---------ARR11(3)      --------->ZAT6--   tacacgtcaatgatcctcgtgaagatttctatccaatagaatacgtttgttccttctctataaaatctaaactattatcaccattcaccactaaactact  2413000                                                                                        <----------CDC5                                                                                       --------->At4g35610                                                                                       ------>NtERF2                                                                                      --------->DEAR3(1)                                                                                      --------->RAP2.3(2)                                                                                   --------->ANAC46                --------->LBD16                                                    ------->GAMYB               <---------HSFB2a(2)                                                <------------AtMYB77               --------->HSFB2a(2)                                      ------>NtERF2--------->RAP2.3(1)              <---------LBD16 ----------->GT1                           --------->LBD16<---------At4g35610          <----------DOF2   ---------->DOF2                            --------->DEAR3(1)          <---------DAG2 --------->YAB1         <------NtERF2         <------NtERF2--------->DEAR3(1) <---------ATHB12      XXXXXXXXXXXXXXXXXXXXX>MIR2933A/B              <------NtERF2--------->DEAR3(2)< ------->WOX13(1)--------->LBD16               ------>NtERF2         ------>NtERF2--------->MYB46(3)-   tcaatcaacttccttttcccgagaaaatcagaaagaaaattcacgatggcaccaagagccgagaagaagcccgccgagaaaaaaaccgccgctgagagac  2413100                                   <------NtERF2                                  --------->LBD16                                 <---------ANAC46                                 <---------DEAR3(1)                                <---------LBD16                              <---------DEAR3(1)                             --------->ATERF1(1)                             <------NtERF2                 --------->ARR11(3)                             <---------LBD16             --------->ANAC58                            <---------ATERF1(1)          --------->ANAC58         ----------->HVH21                        --------->DAG2               <------NtERF2              --------->At4g35610                 <---------At4g35610                --------->LBD16             ----------->GT1                 --------->ZAT2--------->LBD16     <---------ANAC46            <---------DEAR3(1)                 --------->At4g35610               --------->ALFIN1   ---------->DOF2       <----------ID1 ---------->DOF2       --------->ANAC58       ------>NtERF2--------->LBD16 ---------------------WRI1 <---------ARR14(2)      <---------DEAR3(1)--------->AtMYB61      >>>>>>>>>TBF1 -------->ALFIN1 <---------ZAT2------>NtERF2--------->ANAC58     ----------------->AGL1     <--------   cggtggaagagaacaaggctgctgaaaaggctccggcggagaagaaacccaaggcggggaagaaattgccaccaaaggaagccggtgacaagaagaagaa  2413200  Previous    Next  AGI:  At1g07780.1    Description:  PAI1 (PHOSPHORIBOSYLANTHRANILATE ISOMERASE 1); phosphoribosylanthranilate isomerase. similar to PAI2 (PHOSPHORIBOSYLANTHRANILATE ISOMERASE 2), phosphoribosylanthranilate isomerase [Arabidopsis thaliana] (TAIR:AT5G05590.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41379.1); contains InterPro domain Ribulose-phosphate binding barrel; (InterPro:IPR011060); contains InterPro domain N-(5' (InterPro:IPR001240); contains InterPro domain Aldolase-type TIM barrel; (InterPro:IPR013785) Range:  from: 2410117    to: 2412674    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g07790.1    Description:  HTB1; DNA binding. Identical to Histone H2B.1 [Arabidopsis Thaliana] (GB:Q9LQQ4;GB:Q8L950); similar to H2B/HTB2 (HISTONE H2B), DNA binding [Arabidopsis thaliana] (TAIR:AT5G22880.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN78863.1); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histone core; (InterPro:IPR007125); contains InterPro domain Histone H2B; (InterPro:IPR000558) Range:  from: 2412977    to: 2413705    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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