Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->YAB1                <---------LBD16         <---------LBD16         --------->At4g35610         <---------At4g35610                  <---------ANAC58   --------->ARR14(2)        --------->MYB52(1)         <---------ZAT14      <---------ANAC58     <---------HSFB2a(1)       ---------->CDC5<-------TEIL --------->ABI4(2)    <---------ANAC58     <---------HSFC1(2) <----    <---------ZAT2--------->LBD16  --------->ZAT14    <-----------GT1     <------ZmHOX2a(1)  <-------   --------->ANAC58 --------->ARR14(2)        <---------ANAC46 ----------->ARR10         <---------HSFB2a(2)   --------->ANAC58 <---------ARR14(2)   <---------AtLEC2    --------->LBD16 --------->HSFB2a(1)----- ->ZmHOX2a(1) <---------SPL7    ------->GAMYB <---------ANAC58------>NtERF2  --------->HSFC1(2)<----- ------DOF2<---------ZAT18   --------->MYB52(1)    ----------->GT1--------->GLK1(2)      --------->HSFB2a(2)   ttagcaagcttagcggagtccggattcatagcaacggtgctctgaatggcgtattgtaacttgccgagaacctcgaggaagcgtctgccttctaggcggt  2396900                                                                                              <------                                                                                         ------>NtERF2                                                                                         <---------ATERF1(1)                                                                                      --------->At4g35610                                                                                      --------->ZAT2                                                                                      <---------At4g35610                                                                                      ----------->RAV1(2)                                                                                      <---------ZAT2                                                                                     --------->MYB52(2)                                                                                    <-----------RAV1(2)                                                                                   --------->ATERF1(1)                                                                                   --------->TGA2(2)  --------->At4g35610                                                              <------NtERF2-----  <---------At4g35610                                        <-----------GT1      <-----------TGA1 -----ARR14(2)                      >>>>>>>>>TBF1      --------->ALFIN1           <-----------HVH21 --DEAR3(1)                      >>>>>>>>>TBF1       <---------ANAC46            <---------ANAC58 ---->ARR14(2)            <---------AtLEC2           --------->ALFIN1            <---------ANAC58 --GAMYB                 <------NtERF2            <---------AtMYB61      --------->At4g35610------>NtERF2   tttgagcggagaagagggaagagaggctgcatgaagaagaagaagagtcgcagaggtgtggagtaacccattggcatatgaaggcgtcagctgcctccac  2397000                                                                         <------MYB46(1)                                                                         <------MYB83                                             <---------ALFIN1          <---------ANAC46                                            ----------->HVH21        <---------MYB46(3)                                           --------->DEAR3(2)       <---------DEAR3(1)                                          --------->PCF5            --------->ALFIN1                                         ------>NtERF2              <---------AtMYB61                                        <---------RAP2.3(1)      --------->DAG2                                       <---------RAP2.3(2)   --------->YAB1                                   <-------GAMYB        --------->ARR11(3)                            <-----------RAV1(1) --------->TOE2(3)<---------TOE2(3)             <-----                       --------->ANAC58<---------RAP2.6(2)  <---------YAB1                     <-----                       --------->ANAC58<---------ANAC58 <---------ARR14(2)           ----------->RAV1(1) ---ALFIN1           ---------->DOF2   <---------ANAC58 --------->ARR14(2)         --------->ZAT18<-- ---->ANAC46    <---------LBD16   <-----------RAV1(1)  <------ZmHOX2a(1)<---------MYB46(3)     <-----   actatcgccgattagagactcggagaagccctgttgctgttgcggcccgaccttagaggattttgataaggtggtgggtttcaagagcaccattgtttct  2397100                                                                 ------>NtERF2                                                                --------->DEAR3(1)                                   --------->AHL20(2)         <---------RAP2.3(1)                         --------->ALFIN1             <---------ANAC58         --------->CCA1(2)         <---------AHL20(2) <-----------------AGL1 ----ANAC58            <-----------RAV1(1)            <---------ANAC46 ----ANAC58            --------->ALFIN1            <---------MYB52(1) -------TOE1(2)     <---------TOE2(3)   <---------At5g28300  <---------ANAC46         <------NtERF2 ----ANAC46         <---------TOE1(3)  <-----------GT1<---------ANAC58        <-----------RAV1(1)<---   tgggtttgaagaaatgggtcttaaggtgttggggtatttatttaccatcttcggtttcttgtttcggcgactgtttttttttgttggagccgttccaagt  2397200                         <---------MYB52(1)                  --------->WRKY18(1)                                                <---------AHL20(2)                 <-----------HVH21                                               <---------ZAT6            --------->ANAC46                                                 <---------ANAC58            --------->ANAC58                                                 <---------ANAC58            --------->ANAC58                          <----------DOF2*TSS<------------CBF ----TEIL<---------REM1(2)          <------------------------ANAC81 ----------->RAV1(1)   tcgtcaaaatgtacacgctggtcatccgtttatgtctctcattttgttttctaagtctttgattttgggacaacaaattgtttgtgttaaatttagactg  2397300                                                                                               <-----                                                  <---------------AGL15                        <-----                                                  --------------->AGL15                        <-----                                    --------->ANAC46                                           <-----                            <---------AtLEC2     --------->TOE2(3)                             <<<<<<                         ------->MYC3            --------->YAB1                           -----------                         <-------MYC2   <------------CBF                           ----------->HVH21                         <-------MYC3  <---------ICU4                             <-----------HVH21 <              ----------->GT1------->TEIL     <----------DOF2                    --------->WOX13(1) <           <---------AtLEC2<-------TEIL--------->ATHB12                      --------->YAB1    <-----  <-----------GT1        ------->MYC2 <---------YAB1                 ----------->GT1 <---------At5g28300   aaatttacaggttgtatggataaaacacatgcatgtatacatcattgtctttcttaatttagaggtatagtttgttaaatgatcagtcacagtggtaact  2397400    <-----------GT1 ----MYB52(2)                                                 --------->AHL20(2) ----MYB46(2)                                                 <---------AHL20(2) ----MYB59                                                   --------->AHL20(2) -------MYB.PH3(2)                                  <---------ANAC58 <<<<AtMYB44                                        <---------ANAC58 >GT1 <-----------GT1                              <---------MYB46(3)            <---------ANAC58 ----------DOF2                                    <------MYB83                  <---------ANAC58 ---------DAG2                                     <------MYB46(1)         --------->ANAC55(2)     -- ----MYB111(1)               ---------->DOF2      <---------AtMYB61      <-----------GT1      -------   aacttttttctctgtttttgttcttaagagtaaaagttggaataacaagggattggttgtcaaattaataggttttcacgttttcttggtagacaaaaaa  2397500                                                                                           <---------ZAT2                                                                                           ----------                                                                                           --------->At4g35610                                                                                           --------->ZAT2                                                                                           <---------At4g35610                                                                                        <---------At4g35610                                                                                        --------->At4g35610                                                                                        <---------ZAT2                                                                                     --------->ZAT2                                                                                     <---------At4g35610                                                                                     --------->At4g35610                                                                                     <---------ZAT2                                                                                    <---------MYB46(3)                                                                                    <---------ATERF1(1)                                                                                    <-----------RAV1(1)                                                   --------->ZAT14                  =================                                                --------->LBD16                    <---------DEAR3(1)                                               <---------HSFB2a(2)                --------->ATERF1(1)                                            --------->ANAC46                      <---------At4g35610                                            --------->ANAC58                      --------->At4g35610                                          <---------ALFIN1                       <---------ATERF1(1)                                         <---------ZAT18                         <---------RAP2.3(1)-                                         --------->ABI4(2)                      <---------RAP2.6(2) <                                         --------->ZAT18                        <---------RAP2.3(2)<-                                         <---------ZAT14                        <---------DEAR3(1) <-                                         --------->ZAT14                      --------->ALFIN1  <----                                   --------->MYB52(1)                      <-----------RAV1(1)  <----                                 --------->CCA1(2) <---------ZAT14         ========================== ------->CCA1(2)              ----------->GT1  --------->HSFB2a(2)     <---------ZAT14 ============== --->DOF2    ---------->DOF2---------->DOF2 --------->ANAC58           --------->ZAT14 <-----------RAV1(1)   gataagagaagagggaaaagaaactagtaagaaagataaacggtgcactccagaacagtctcgagcccatctgtgaactggtgcggctgctgctgctggg  2397600     <------ZmHOX2a(1) --------->LBD16 ->RAV1(2) --------->LBD16 ==RAV    <---------ANAC55(2) -------->HSFB2a(2)                                             ------>NtERF2 ---------HSFB2a(2)                                            --------->DEAR3(1)              <----- --------LBD16                                                --------->DEAR3(2)               ------ --------HSFB2a(2)                <---------HSFC1(2)         --------->SPL7                    ------ -------HVH21 ---------->DOF2     --------->HSFC1(2)        <---------ARR14(2)                 <----- -----PCF2--------->ANAC46        --------->HSFB2a(1)       --------->ARR14(2)                ------- ==RAV<---------ARR14(2)      <---------ANAC58           --------->ZAT6              <---------ARR14(2) ==RAV--------->ARR14(2)      <---------ANAC58         -------->P                    --------->GLK1(2)   tcccggaggaacccgtaaaagtcttgacaattgcgaagcctctcgcattcacatacttaccagtaccgcccattaccccaagatgagattccgatgcagc  2397700                                                                                           <---------ZAT18                                          --------->ZAT14                       <---------TCP20                                         --------->DEAR3(1)    --------->ANAC58 --------->PCF5           --------->DEAR3(1)         <---------ALFIN1         --------->ANAC58 --------->PCF2    --------->AtLEC2                  --------->ANAC46       ---------->DOF2  <------MYB46(1) ----At4g35610                       --------->MYB46(3)    ----------->HVH21  <------MYB83 --------->ZAT18 --->At4g35610                     <---------ARR14(2)     --------->At5g28300<---------MYB46(3) --->ZAT2 --------->ANAC46         --------->ARR14(2)     --------->LBD16   <---------ANAC58   ------ ----ZAT2 --------->ANAC58        <---------CCA1(2)     XXXXXXXXXXXXXXXXXXXX>MIR4228 <---------ATHB12 >TEIL    --------->ANAC58   --------->YAB1        --------->YAB1           <---------ANAC58   <-----   tgttctatgcacaccgaagaaactgatgctatcttcatatccaccgctctcaaacatagccgtgaaagccatagtctggctggtcccatcaagggcactt  2397800  Previous    Next  AGI:  At1g07725.1    Description:  ATEXO70H6 (exocyst subunit EXO70 family protein H6); protein binding. similar to ATEXO70H5 (exocyst subunit EXO70 family protein H5), protein binding [Arabidopsis thaliana] (TAIR:AT2G28640.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66786.1); contains InterPro domain Exo70 exocyst complex subunit; (InterPro:IPR004140) Range:  from: 2394798    to: 2397269    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g07728.1    Description:  other RNA Range:  from: 2395458    to: 2397342    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g07740.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G16420.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21728.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 2397439    to: 2400505    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g07730.2    Description:  disease resistance-responsive family protein. similar to disease resistance-responsive family protein / fibroin-related [Arabidopsis thaliana] (TAIR:AT2G28670.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77499.1); contains InterPro domain Plant disease resistance response protein (InterPro:IPR004265) Range:  from: 2397524    to: 2398693    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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