Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                          <---------ALFIN1                                       --------->ZAT18                                       <---------ZAT18                                       --------->ZAT14                         --------->HSFC1(2)                         --------->HSFB2a(1)                         <---------HSFC1(2)              --------->GLK1(2)       --------->RAP2.6(2)              --------->ARR14(2)   --------->MYB52(1)                         --------->bZIP60(1)              <---------ARR14(2)   --------->ARR14(2)                         --------->TGA2(1)             <---------GLK1(2)     <---------ARR14(2)                         ----------->GT1          --------->ANAC46--------->TOE1(2)                       <---------ICU4         --------->LBD16 <---------HSFB2a(1)                      -------->ATHB1         <---------LBD16 <---------KAN4(1)              <----------DOF2       <---------bZIP60(1)         ------>ZmHOX2a(1)--------->KAN4(2)            <---------DAG2         <---------REM1(1)    --   <-------TEIL          --------->KAN4(1)   <----------DOF2      --------->ATHB12               <---  <-----------GT1       <---------KAN4(2)  <---------DAG2        <---------ATHB12------->TEIL  ------   aaatatacatcctcggaatcttgaagaacattcgacaaaaccgcactctttgggttacctttcccaaatcattgaatatgatgtaacttatattgaacaa  2381200                                                         --------->ARR11(3)<---------ANAC58          ------>ZmHOX2a(1)                     ----------->RAV1(1)        <---------ANAC58       --- ------->ANAC46                               <-------TEIL ------>ZmHOX2a(2)               --------->YAB1 ------ALFIN1                              <---------At4g35610    <----------DOF2 <---------MYB52(1) ----->RAV1(1)               --------->ICU4--------->At4g35610<----------DOF2    <----------DOF2 ----   cacagcatcatccttcttcttgtaagatgtcatactgaataagacagatgcaacattttgatctctttcttttgtttgtttgcctttatgtcttcataac  2381300                                                                                       <----------DOF2                                                                                      ------>ZmHOX2a(2)                                                                                     <---------RVE1(1)                                                                                     <------ZmHOX2a(2)                                                        <---------ANAC58            --------->ARR14(3)                                                        --------->ANAC55(2)         <---------ARR11(3)                                                        <---------ANAC58            <---------AGP1                                           <-----------------AGL1                   --------->ARR11(3)                                      <---------At4g35610                           --------->ARR14(2)                                      --------->At4g35610      <---------ANAC55(2)  <---------ARR14(2)                                      <---------ZAT2    <---------ANAC55(2)    --------->LBD16                                      --------->ZAT2   --------->MYB52(2)     --------->ANAC58                                 ----------->HVH21 <---------MYB46(3)         --------->ANAC46                             <---------ZAT14<---------------AGL15             --------->ANAC58                             --------->ZAT14--------------->AGL15            <------NtERF2                         <---------ARR14(2)<-----------------AG--------->ANAC55(2)  <---------ARR14(3)                         --------->GLK1(2) <-----------------AGL2            <---------LBD16                         --------->ARR14(2)----------------->AGL3         --------->PCF5   <--------- -------->RAV1(1)        --------->ARR11(3)========================================================== --->GAMYB               <---------ARR11(3)<-----------------AGL3  <---------YAB1   --------->AGP1   ccacatacttatagtatatatgtgcaaaatctgcagtgacagcttactagttttggttacttgataagtatttttggtccccgcaagatctttaaaccag  2381400                                                                                     -------->ATHB1                                                                    --------->AHL20(2)                                                                    --------->AHL20(1)                                                                    <---------AHL20(2)   --------->YAB1                                                                   <---------AHL20(2)<---------ICU4                                                                   --------->AHL20(2)<---------AHL20(2)                                                                ------>MYB83         --------->ATHB51                                                                ------>MYB46(1)      --------->ATHB12                       --------->ICU4                         <---------MYB59        -------->HAHB4                     --------->YAB1                           --------->TOE2(3)     --------->ICU4                    <---------YAB1                        <---------WRKY38(1)       <---------ATHB51        ---------->ID1 <---------YAB1                    --------->WRKY18(1)        <---------YAB1        <-----------------AG--------->WOX13(1)           <<<<<<<<<WRKY6           --------->YAB1   -- --GT1  <-----------------AGL1   <---------TOE2(3) <---------ARR14(2)             <--------HAHB4   -- =========================MADS_MADS                --------->ARR14(2)            <---------YAB1 <----   attgcaacttgtctcatatggtatgatgatcaattaagaaactatctcattcggatatagtcaacctaattttattagtcactataattattgataattt  2381500                                                    --------->REM1(2)                                              <-----------GT1                                          --------->AHL20(2)                              <---------HSFB2a(2)                                          <---------AHL20(2)                              --------->LBD16                                         --------->AHL20(1)                               --------->HSFB2a(2)                                         <---------AHL20(1)                              <---------TOE1(1)          ----------->GT1                --------->AHL20(2)                           --------->DEAR3(1)  --------->YAB1                         <---------AHL20(2)    ---------->DOF2      <---------ATERF1(1) ------->TOE1(3)                    --------->AHL20(2)  ----------->GT1   --------->AHL20(2) <------ZmHOX2a(1) ------->TOE2(3)                  ----------->GT1<---------------AGL15    <---------AHL20(2)--------- -------GT1                     ---------->DOF2  --------------->AGL15  <----------DOF2------>NtERF2   accttaataacatggttaattactagtaaaccctgaaagtaaataaaattactatgtagagaaaaaaaaggtccctttaatttgttcgcctccgaggacg  2381600                                                                                           <---------ANAC46                                                                                           <---------ANAC58                                                  <---------AHL20(2)                       <---------ANAC58                                                <---------RVE1(1)                         --------->MYB52(2)                                               <---------GLK1(2)                      <---------ANAC58                                               --------->ARR11(3)                     <---------ANAC58                                           <------ZmHOX2a(2)                  --------->HSFC1(1) <---              --------->ZAT6          ---------->DOF2<---------AHL20(2)       <---------HSFB2a(2)<---   ------>ZmHOX2a(1)     <-----------HVH21<---------ARR11(3)                  --------->HSFB2a(2)---- -->HVH21   *TSS     --------->MYB52(1)   --------->ARR11(3)  --------->GLK1(1)  <---------GLK1(2)   gggtcctaaacacataagactaaaaacggtcagtagtacaaaaagatcagatttttttattccgatttcttctccatcttcgagaatttcgttccttgga  2381700                                                                         --------->YAB1                                                                        <---------YAB1                                                                     <---------YAB1                                                                   --------->At4g35610               <----------DOF2                                     <---------At4g35610  --------->HSFB2a(2)                <---------GLK1(2)         <---------WRKY18(1)  <---------HSFB2a(2)      <---------MYB52(1)                 ----------->HVH21 ------At4g35610          ------>ZmHOX2a(1)               <---------ANAC46                  <-------- ------ZAT2 --------->GLK1(2)    <-------TEIL             <---------ANAC58              <----------DOF2 ----->At4g35610          <----------DOF2                 <---------ANAC58 <---------YAB1   <--------   gcttcgagattgagtttctttgttcatcctttgggtccatattcttatcaggttctaatttcgtttgactgctgattataaatctgagtgctttagggtt  2381800                                                      <-------GAMYB                                                     --------->MYB111(2)                      ----------->GT1                --------->MYB55(2)                       <------        <-----------GT1    <-----------GT1           --------->MYB52(2)                      --------        <-----------------AGL1<----------DOF2     <---------MYB46(3)  <---------WOX13(1)     --------       <-----------GT1<---------MYB46(3)         ------>ZmHOX2a(2)   >>>>>>>>>ARR2          <--------   <---------AHL20(2)<---------ATHB12         --------->ATHB12      --------->ATHB12        <-------- -TOE1(3)            --------->ICU4          ----------->HVH21     <---------YAB1   <---------YAB1 -TOE2(3)    --------->ARR14(2)         ------->TEIL <---------MYB46(3)  <---------ANAC46   ---------   tttgtttattttccgatttcgcaatggttaaactttctcttgaacccttgatcggttgttgaaagggttttgattgtttgtaatgtatgattcagatacg  2381900                                                                                            ---------                                                                                            ---------                                                                                            ---------         <---------------AGL15                                                              ---------       <---------At5g28300                                                              <-----------HVH21 -TEIL<-----------GT1                        <----------DOF2                           <---------At4g35610 ->ARR14(1)                  ------->TEIL   <---------ANAC58                           --------->At4g35610 ->CCA1(2)                <---------YAB1    <---------ANAC58                           --------->ANAC46 -GLK1(2)--------------->AGL15           ---------->ID1   <---------At5g28300    ==================== -ARR14(2)            <---------------------WRI1      ------->TEIL               <----------DOF2 ---- >ARR14(2)           <---------ANAC46  <---------MYB46(3)<-----------GT1      ------>ZmHOX2a(1)  <---   ttgaagttttactgtttatagttctgtgatgaatccaaagtttgttcctttccatgtatttactgtctcaccatataatccttcttttcaggtcacgact  2382000                      <---------ZAT14                      --------->ZAT14                     ----------->HVH21     <---------ANAC46                 --------->ZAT18           <---------ANAC58                 <---------ZAT14           <---------ANAC58 >ANAC58       <---------ZAT2        <------MYB46(1) >ANAC58       --------->ZAT2        <------MYB83            --------->HSFB2a(2) >O2           --------->At4g35610<---------ANAC58           <---------HSFB2a(2) >TGA1a        <---------At4g35610<---------ANAC58       <---------ANAC58 =bZIP_DOF----------->RAV1(2)    --------->ZAT2          <---------ANAC58                          -- ----->ZAT14------>ZmHOX2a(1)    <---------ZAT2     <----------DOF2                                -- ------ZAT14--------->LBD16     ------>ZmHOX2a(1) ------->TEIL        <---------WOX13(1)       ------   gcaatctcacattcctgagctcactgaagggttcctgcttggtttgcttatgaacttttgcttctggagttgattaatctctgcaaatgtcaagtttact  2382100  Previous    Next  AGI:  At1g07700.1    Description:  thioredoxin family protein. similar to ATTRX4 (thioredoxin H-type 4), thiol-disulfide exchange intermediate [Arabidopsis thaliana] (TAIR:AT1G19730.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61342.1); contains InterPro domain Thioredoxin family (InterPro:IPR015467); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335); contains InterPro domain Thioredoxin-related; (InterPro:IPR006662); contains InterPro domain Thioredoxin domain (InterPro:IPR013766) Range:  from: 2379658    to: 2381359    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g07705.1    Description:  transcription regulator. similar to VIP2 (VIRE2 INTERACTING PROTEIN2), transcription regulator [Arabidopsis thaliana] (TAIR:AT5G59710.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21738.1); contains InterPro domain NOT2/NOT3/NOT5; (InterPro:IPR007282) Range:  from: 2381612    to: 2386089    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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