Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                               <---------ANAC58                             <---------ANAC58                       ----------->HVH21                      ------>ZmHOX2a(2)                     <------ZmHOX2a(2)                                       ------>MYB83                     --------->CCA1(2)                                       ------>MYB46(1)                    --------->ARR14(2)                                     <---------MYB46(2)                    <---------ARR11(3)                                     <---------MYB111(2)                    --------->ARR11(3)           <---------ZAT14           --------->AtMYB61                    <---------ARR14(2)           --------->ZAT14          --------->ANAC58                    --------->AGP1               <---------ZAT18          --------->ANAC58                    <---------AGP1     --------->ANAC46                   --------->ANAC46       <---        --------->AtLEC2--------->At4g35610  <---------ICU4             --------->ZAT6        ------- --RAV1(2)     --------->TOE2(3)     <---------ALFIN1               <---------MYB52(2)        <------   tctctaattcattcaaaccatagatctgatgccgtttcaacacctcatcagtgctcaaacctttctcacgactaacaccaaacttctcttcgcattccga  2374100                                                                       --------->YAB1                                                                       <---------ICU4                    --------->DAG2                                --------->LBD16             <---------ZAT2      <---------WRKY18(1)             --------->ANAC58            --------->ANAC46     >>>>>>>>>>WRKY43                --------->LBD16        --------------->AGL15    >>>>>>>>>>WRKY38                --------->ANAC46   <----------DOF2 ---------->DOF2                               --------->ANAC58  <---------ICU4 <------ZmHOX2a(1)                              <---------LBD16            <---------ARR11(3) ------ALFIN1--------->ZAT2      >>>>>>>>>>WRKY26           --------->KAN4(2)    <----------DOF2 -->ANAC46  --------->ANAC58    ----------->HVH21        <---------ANAC58   <---------At4g35610 ---ETT(1)  --------->ANAC58    --------->WRKY38(1)      <---------ANAC58 <-----------GT1  --------->ARR11(3)   cacatctttaccccaagcaggaaaagtatcagacttgaccaattcagaactattagtttgcttattcccgcaatcttcacctcctttccccattatcttc  2374200                                                                                        <------------                                                                                     <---------HSFC1(2)                                                                                     --------->HSFC1(2)                                                                                     <---------HSFB2a(1)                                                                                     --------->HSFB2a(1)                                                                                    <-----------ARR10                                                                                    <---------ARR11(1)                                                --------->ZAT6                      --------->GLK1(2)                 <---------ATHB12    <---------At4g35610                            --------->ARR14(2)                <---------ARR11(3)   <---------ZAT2                                 ------->TEIL           <------ZmHOX2a(2)         --------->At4g35610                            <---------ARR14(2)          <---------ARR11(3)     <-----------HVH21    --------->YAB1        --------->MYB52(1)    ---------->DOF2         <---------YAB1    <-----------GT1              --------->TOE1(2)       -- <-----------HVH21 --------->WOX13(1)--------->ZAT2  <---------YAB1       <---------MYB52(2)  -------   cactgtcaaagagatcaaaatcattcaaatctaattgtcagcttcaagttacactatgagaaaacagagattgaaaacaaacgacgaatcttcgaataaa  2374300                                                            ----------->RAV1(1)                                                         --------->ANAC46                                                         --------->ANAC58                                                         --------->ANAC58    <------ZmHOX2a(2)                                  ---------->DOF2         --------->GLK1(2)    -  ------->GAMYB                  --------->WOX13(1) <-----------HVH21        --------->HSFC1(2)     - --------->MYB46(3)         --------->LBD16    <------ZmHOX2a(2)             --------->HSFB2a(1)    < ---------WRI1             --------->RAP2.6(2) <---------ZAT14           --------->ANAC46 --------->ANAC46 ------->MYB52(1)       --------->ARR14(2)   <---------GLK1(1)         --------->CCA1(2)  --------->ANAC58 -->AHL20(2)            <---------ARR14(2)   --------->GLK1(1)   --------->AHL20(2)       --------->ANAC58   acaacgatcaaatttcaaaaatcgagtagccgcataaatcaaatcagagatcagtgtcaaagcaacatataatatacgaagaatccaaaaacactcaaat  2374400                                                                           --------->SPL7                              ----------->GT1                ----------->GT1                             ------>ZmHOX2a(2)              <---------ANAC46                --------->ANAC58                           <---------At4g35610                      -       <----------ID1       <------ZmHOX2a(2)              --------->At4g35610                <------    --------->DAG2         <---------ARR14(2)        --------->GLK1(2)   <---------SPL7       -------   ---------->DOF2         --------->ARR14(2)        --------->ARR14(2)  <---------SPL1(2) --------->LBD16 -------->LBD16 --------->ANAC58                    <---------ARR14(2)   --------->ZAT14  <---------ANAC46 -------->HSFB2a(2) <---------WRKY12                --------->ARR14(2)   <---------ZAT14 <---------LBD16 ---------HSFB2a(2) <---------WRKY38(1)             <---------GLK1(2)  --------------->AtSPL8<-------   tccgagaaagcgaagaacacggacaacgagatcggcaaaaaaaaaaactcaccagaatcggagcggataaaactccgtactgtttcttcgatgcggaaat  2374500                                                                                       --------->AHL20(1)                                                                                       --------->ARR11(3)                                                                        ------------>CBF<---------AHL20(2)                                                                   --------->ARR11(3)  <---------AHL20(1) --------->ANAC46                                                  <---------ARR11(3)  <---------ARR11(3) --------->ANAC58                                                  --------->AHL20(1)  <---------AHL20(2) --------->ANAC58 <---------GLK1(2)          <------ZmHOX2a(1)    ----------->TBP      --------->AHL20(2) -------->SPL7    <---------ARR11(3)       <---------TOE2(3)    <-----------TBP     --------->AHL20(2) ---GLK1(1)       <---------ARR14(2)      *TSS     <----------DOF2<---------AHL20(2)--------->YAB1 -->GLK1(1)       --------->ARR14(2)   --------->HSFB2a(2)  ----------->GT1 <---------ATHB12 --ARR14(2)     --------->LBD16        <---------HSFB2a(2)<-------TEIL >>>>>>>>>>>>>>>>>LFY   cgcacgcctctctctctccagatacttctcttcttctacttctctaaggaagcctttacatacagtatatatattccaatgttgaataatatatttgttt  2374600                                                            ------>ZmHOX2a(2)                                                            ================================HOX2a_HOX2a                                                  <------NtERF2                                                 ------>NtERF2                                                <---------bZIP60(1)                                                <---------ATERF1(2)                                                --------->bZIP60(1)                                                --------->ATERF1(2)                                        <------ZmHOX2a(1)  <------ZmHOX2a(2)                                        ==========================HOX2a_HOX2a                                        ===========================HOX2a_HOX2a                                      --------->LBD16      =================================HOX2a_HOX2a                                     <---------LBD16----------->RAV1(1)                                     --------->HSFB2a(2)  <---------ARR11(3)                                     <---------HSFB2a(2)  <---------ARR14(2)                              ------->TEIL     --------->RAP2.6(3)  --------->ARR11(3)                             <---------CCA1(2)--------->MYB52(1)    <---------ARR11(3)                         <---------ANAC58    ----------->HVH21      --------->AHL20(1)                         <---------ANAC46    ----------->TGA1       <---------AHL20(1)                   <---------YAB1<----------DOF2<---------ANAC46  ----------->ARR10               <--         <----------DOF2 <---------ANAC58---------->DOF2  --------->ARR14(2)         ------>ZmHOX2a(1)   ttgtttatattcttttagagtataatggcttgtatctttccaggaaagtgacggcaacacgatctgataagatattgcatttaagtccttatctgtctct  2374700                                                                                                    <                                                                                          <---------AHL20(1)                                                                                          --------->AHL20(2)                                                                                          <---------AHL20(2)                                              ------->MYC2                               --------->AHL20(2)                                              <-------MYC2                           <---------AHL20(2)                            <---------ANAC58  <-------MYC3                           --------->AHL20(1)                            <---------ANAC58  ------->MYC3                           --------->ARR11(3)                          <-----------GT1    --------->ANAC58                        <---------ARR11(3)                         <-----------GT1     --------->ANAC58                  --------->At5g28300  <                   <---------YAB1           <---------TOE2(2)                 ----------->GT1       <                ------>ZmHOX2a(1)----------->GT1                 --------->MYB52(1)  <---------AHL20(1)     ---------->DOF2--------->YAB1          <---------TOE1(2) --------->ANAC55(2)    --------->AHL20(2) --------DOF2   --------->ICU4<---------MYB52(1)              <---------ANAC55(2)   --------->AHL20(2)   ctttctctaaagtaagtccttatcatttttccgttttgtaaaatcgcacgttttgatgtctattacttaagggactgaaactgtaaatatattaaatttt  2374800                                                           --------->ARR14(2)                                                           <---------ARR14(2)                                                         ----------->ARR10                                              --------->AHL20(2)          --------->ANAC58                                            --------->TOE2(3)             --------->ANAC58              <---------AHL20(2)          ------->TEIL   <---------ARR14(2)              --------->AHL20(2)          <-------TEIL   --------->ARR14(2)         <---------AHL20(2)           --------------->AtSPL8            =============================         --------->AHL20(2)           <---------------AtSPL8            ---------->DOF2     --------->ICU4                   <---------------AtSPL3    <---------ANAC58 ---------ANAC46               <---------ANAC55(1) --------->TOE1(2)<---------ANAC46 ---------ANAC58               <---------ANAC46<---------AHL20(2)<----------DOF2 ---------ANAC58       <----------DOF2--------------->AtSPL3    <---------ANAC58                   --   tggggtgatttttaatttaaataagcttttattaagtgtagatgtacattaaatgtgcgaatatttgctttcggagaagcaaaatagattccaacgtcga  2374900              <---------O2              --------->TGA1a              <---------bZIP60(1)              <---------ANAC55(1)              --------->ANAC55(2)              <---------ANAC55(2)              <---------ANAC58              >>>>>>>>>>HY5              --------->O2              <---------bZIP60(2)              --------->bZIP60(1)              <---------ANAC58              <---------TGA1a              <---------ANAC46           ----------->HVH21           ----------->TGA1          <-----------HVH21          <-------PIF5          ------->PIF5          ------->MYC3          <-------MYC3          ------->MYC2          <-------MYC2         --------->ANAC58         --------->bZIP60(2)         --------->O2         --------->TGA1a         --------->ANAC58         <---------TGA1a                               ------->MYC2         --------->ANAC46                              ------->PIF5         <---------O2                                  <-------MYC3         --------->ANAC55(2)                           ------->MYC3         <---------ANAC55(2)                           <-------MYC2       <-------------DYT1                              <-------PIF5       <---------ALFIN1                                <-------MYC4       <------------OsbHLH66                           ------->MYC4     <-----------HVH21                                <---------ANAC55(2)     ----------------->PIF3(1)                        --------->O2   ------>ZmHOX2a(2)                                  <---------O2  <------ZmHOX2a(2)                            --------->YAB1  --------->GLK1(1)                            <---------ICU4  <---------GLK1(1)                          --------->ICU4        <---------ICU4  <---------At4g35610                    ------>NtERF2--------->TGA1a  <---------MYB46(3)  --------->At4g35610 <-------MYC2      --------->O2  --------->ANAC55(2) <---------ARR14(2)   XXXXXXXXXXXXXXXXXXXXX>MIR848    <---------TGA1a  ----------->GT1 --------->ARR14(2)   <-------MYC3      --------->bZIP60(2)        --------->ATHB12 --------->ARR11(3)   ------->MYC2      --------->ANAC58          <---------YAB1                <---- <---------ARR11(3)   ------->MYC3      --------->ANAC46   ----------->HVH21        --------->YAB1 ==================bZIP_DOF             --------->ANAC58--------->ALFIN1       ----------->GT1  <---- --------->ARR10--------->ALFIN1XXXXXXXXXXXXXXXXXXXX>MIR171A    --------->bZIP60(2)<---------YAB1<---   tgggatctgccacgtgacgtggcacatgggactggctatgccacgccaatattgacacgtggtgacacatcattggttaaatggtattatagctagttgc  2375000  Previous    Next  AGI:  At1g07670.1    Description:  calcium-transporting ATPase. Identical to Calcium-transporting ATPase 4, endoplasmic reticulum-type (ECA4) [Arabidopsis Thaliana] (GB:Q9XES1;GB:Q9LQP2); similar to ECA2 (CALCIUM-TRANSPORTING ATPASE 2, ENDOPLASMIC RETICULUM-TYPE), calcium-transporting ATPase [Arabidopsis thaliana] (TAIR:AT4G00900.1); similar to ECA3 (ENDOPLASMIC RETICULUM-TYPE CALCIUM-TRANSPORTING ATPASE 3), calcium-transporting ATPase/ calmodulin binding [Arabidopsis thaliana] (TAIR:AT1G10130.1); similar to ECA1 (CALCIUM-TRANSPORTING ATPASE 1, ENDOPLASMIC RETICULUM-TYPE), calcium-transporting ATPase [Arabidopsis thaliana] (TAIR:AT1G07810.1); similar to hypothetical protein O Range:  from: 2370049    to: 2374542    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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