Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <---------ZAT6  <---------ZAT14  --------->ZAT14 --------->MYB52(1) ----------->RAV1(1)                                                                 --------->TOE1(2) -------->ANAC46                                                                  *TSS ------>ANAC46                                                                   <---------GLK1(1) ------>ANAC58      <---------DEAR3(2)         <-----------GT1              --------->At4g35610 ------>ANAC58  ------->GAMYB         ------>NtERF2                       ------>ZmHOX2a(2) ----TEIL --------->ANAC58         --------->At4g35610                   <------ZmHOX2a(2) ---ANAC55(2)   --------->ANAC46   <---------At4g35610                  <---------ARR14(2)          - -->ANAC55(2)  --------->MYB46(3)  --------->ZAT2         <---------YAB1--------->ARR14(2) <---------GLK1(1) -HVH21   --------->ANAC58  --------->YAB1    <-----------GT1   <---------YAB1   --------->GLK1(1)  <   acacaacagtgtaagcaaacgccggtctcatcatattagctgccattttttcccagtcttatgattctgatttcgatccgatgaaatccttggaaatgct  2368400                                             --------->ALFIN1                            <-------PIF5                                            <-------MYC2                                 <-------MYC3                                            ------->MYC4                                 ------->MYC2                                            ------->MYC2                                 <-------MYC2                                            <-------PIF5                                 ------->MYC3                                            <-------MYC4                                 ------->PIF5                                            ------->PIF5                                <---------ANAC55(2)                                            ------->MYC3                                =============                                            <-------MYC3                                --------->O2                                   --------->At4g35610                                  --------->bZIP60(2)                                 <---------ZAT18                                        =============                               <-----------HVH21 <---------ETT(2)                       --------->ANAC58                            <---------At5g28300  --------->ETT(2)                       --------->ANAC58                         <----------DOF2   <---------ANAC55(2)        <---------ZAT14   --------->ANAC55(2)                         ============================bZIP_DOF         --------->REM1(2) <---------TGA1a                    ------>ZmHOX2a(2)      --------->ANAC55(2)       --------->ALFIN1   --------->TGA1a                   --------->GLK1(1)       <---------TGA1a         <---------ANAC46   <---------ALFIN1                   <---------GLK1(1)       --------->O2          <---------ANAC46     <------------OsbHLH66                   <------ZmHOX2a(2)       <---------O2          <---------ANAC58   ------>NtERF2                  <---------ARR14(2)       --------->TGA1a  ------->TEIL<---------ANAC46<---------O2                  <---------ARR11(3)      ------------>OsbHLH66  <---------ANAC58--------->At4g35610<                  --------->ARR14(2)     <---------ALFIN1--------->AtLEC2     <---------ANAC58 <----- -------->YAB1    --------->ARR11(3)    <---------REM1(2)--------->ANAC58     <---------ANAC58 <----- ---------ICU4   <------ZmHOX2a(1) <---------At4g35610   --------->ANAC58  <---------ZAT18   <-------   catcatcaaacctcacataggatctctctttacggtgagctcaacacgtggtcgacaacatgcaccttcgtgtgtagggtacttgctgccacgtgagctt  2368500      <----------DOF2      <---------DAG2     --------------->AGL15    <-----------------AGL3    ----------------->AGL3 =====bZIP_DOF =====bZIP_DOF ---------At4g35610                                                                       <----------DOF2 ----DAG2                                                  ---------->DOF2      <---------YAB1 -----DOF2                                            ----------->GT1           <-----------RAV1(1) --At4g35610                                  <----------DOF2                <---------MYB52(1)   tttgctcccttttttgggtcaatttgggcctactactcacatatgggcctttagattagaaaaaagtcttgggttatctgttatgttggaggcttttttt  2368600                                                                          ------->GAMYB                                                                         --------->MYB46(3)                                                                        ------>MYB46(1)                                                                       --------->MYB52(1)                                                                      --------->TOE1(2)                                                                      --------->TOE2(2)                                        --------->ANAC58             --------->DEAR3(2)                                        --------->ANAC58    ------>ZmHOX2a(2)                                      ---------->DOF2     --------->ARR11(3)                               ---------->DOF2            <---------ARR11(3)     <---------GLK1(2)                           <-----------------------TaNAC69(2)<----------DOF2<------ZmHOX2a(2)       -               <---------REM1(2)--------->DAG2          --------->WRKY12------>MYB83               <-          <---------ANAC46 <---------------------WRI1  <---------MYB52(1)<---------ATHB12      ------    <---------AHL20(2)   ----------->TGA1             <-------GAMYB  --------->MYB46(3)        <-----   agttgtttaatggagtttacacagagaatgacgaaaagtcgaaagccatctactaccgttgatctttaagaaccaacgatccatattcttcttacagatt  2368700       ------>ZmHOX2a(2)       --------->ANAC58       --------->ANAC58      <------ZmHOX2a(2)     <---------ARR14(2)                              --------->AHL20(2)     --------->ARR14(2)                        --------->RAP2.6(2)                                <-- <---------LBD16                           <---------RAP2.6(2)                         --------->TOE2(3) -------->ANAC46                          --------->SPL7                              ----------->GT1 --------LBD16                            --------->RAP2.6(3)                <----------DOF2     ---- --->GLK1(1)             ---------->DOF2<---------MYB52(1)    ------>ZmHOX2a(1)   --------->AHL20(2) ----GLK1(1)         <-------GAMYB  ------->TEIL<------NtERF2<---------LBD16--------->TOE2(3)  ------   tcacgcggatcgcaatcttggaccgttgaaagaagatgaatcgttacggccgaaaatatatgtcctgggtagtcacttcctttataaaatgttaatccca  2368800         <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)        <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                             -     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      --------->YAB1                                ---------    <------------------------ANAC81  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)              --------->TOE1(2) <----------DOF2                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)            --------->ANAC58 <---------DAG2                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)            --------->ANAC58 -------ALFIN1                    *TSS <----------DOF2    ---------->DOF2             --------->ANAC46 ----->MYB46(3)                  --------->ANAC46       <------NtERF2     ---------->DOF2   --------- --->ANAC46                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        <------ZmHOX2a(1) <---------YAB1   ccactttttttttttttttttttttttttgtcaaaacacaactttcattcattaaggcctcaaagcctcaagagaggaaagttgatacaagctacgataa  2368900               <-------TEIL             <---------HSFB2a(2)     ---------->DOF2                    --------->HSFB2a(2)   ------->GAMYB              <---------ALFIN1            <-----------GT1 ---------->RAV1(1)          --------->MYB46(3)       <---------DAG2         --------->ARR11(3) >TOE2(3)     --------->CCA1(2)  <----------DOF2      <----------DOF2        <---------ARR11(3) >YAB1   ---------->DOF2   --------->ANAC46     >>>>>>>>>MYB98  --------->YAB1  <----------DOF2     -   tacaacagaaagaaagatacaagttaatcccaccactttgtactcgaagtaacatactttttacaatcacatttttgaagaactttcattccataaatct  2369000                                                     --------->TOE2(3)                                <------NtERF2       <---------At4g35610                              <---------ANAC58      --------->At4g35610                        <---------ANAC58    <---------AHL20(2)                        <---------ANAC46   <---------AHL20(2)                        <---------ANAC58   --------->AHL20(1)                       <-----------GT1                    <---------ANAC58       --------->AHL20(2)                      ---------->ID1          <---------AHL20(1)  <---------ANAC58<---------TOE2(3)            --------->HSFB2a(2)         <---------CCA1(2)    <---------ANAC46<---------TOE1(3)           <-----------GT1        ---- -------->ANAC46    <---------ANAC58       <---------AHL20(1)    ---------->DOF2  <-----------HVH21   acaggtaattcatatatttctgccttgcttaggcgtagatttcaatttaatgttagcttaatttcttcaaagtttttctcgatttgtcacattttcgaag  2369100                                                                                     <----------DOF2                                                                                    =================                                                                                    ------>ZmHOX2a(2)                                                                                   ==================                                                                                   <------ZmHOX2a(2)                                        --------->GLK1(2)                         <---------ARR11(3)                                        --------->ARR11(3)                        --------->ARR14(2)                                       <---------GLK1(1)                          <---------ARR14(2)                                       --------->GLK1(1)                          --------->AGP1                                   --------->HSFB2a(2)                            <---------AGP1                                   <---------HSFB2a(2)                            <-----------ARR10                                  ------>ZmHOX2a(2)                               --------->ARR11(3)        <-----------GT1         --------->ARR11(3)                               <---------CCA1(2) -- <---------AHL20(2)             <---------AGP1                          <---------YAB1          ----- --------->AHL20(2)        --------->ATHB12                 <-----------GT1  <-----------GT1    ----- ------->GT1<---------GLK1(2)<---------WOX13(1) <---------GLK1(1)    <---------MYB52(1)         <----   agtttaaatgtttcgattctcaattcaattgattgatctggaaatctagggtttctgaatagtttccttctgttatttttcacagatctttgtgtatcaa  2369200                                                                     --------->GLK1(2)          >>>>>>>GRF7                                              <---------HSFB2a(1)       <-----------HVH21   <------ZmHOX2a(1)    <------ZmHOX2a(1)  <---------HSFC1(2)              -- ==================HOX2a_HOX2a   --------->ATHB12                  --------->HSFB2a(1)             -- ==================HOX2a_HOX2a   <------ZmHOX2a(1)                 <------MYB46(1)                 -- -------->DOF2       --------->DAG2       --------->DAG2           <------MYB83                    -- ---->ANAC58       ---------->DOF2<---------ARR14(2)               --------->HSFC1(2)   --------->ANAC46 ---->ANAC58<------ZmHOX2a(1)---------->DOF2  --------->ALFIN1  <------ZmHOX2a(1)       --------->ANAC58 -----ANAC55(2)   <------ZmHOX2a(1)     ---------->DOF2      <-----------RAV1(2)        --------->ANAC58   gtaaagagatgtcaggaagaggaaagggaggaaaaggattgggaaagggaggagcgaagaggcacaggaaggttctgagggataacattcaaggaatcac  2369300  Previous    Next  AGI:  At1g07645.1    Description:  lactoylglutathione lyase family protein / glyoxalase I family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO21691.1); contains InterPro domain Glyoxalase/bleomycin resistance protein/dioxygenase (InterPro:IPR004360) Range:  from: 2367434    to: 2368382    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g07660.1    Description:  histone H4. Identical to Histone H4 [Arabidopsis Thaliana] (GB:P59259;GB:P02308); similar to histone H4 [Arabidopsis thaliana] (TAIR:AT5G59690.1); similar to histone H4 [Arabidopsis thaliana] (TAIR:AT5G59970.1); similar to histone H4 [Arabidopsis thaliana] (TAIR:AT3G53730.1); similar to hypothetical protein OsJ_028319 [Oryza sativa (japonica cultivar-group)] (GB:EAZ44836.1); similar to histone 4 [Elaeis guineensis] (GB:ABD62753.1); similar to histone H4 [Hyacinthus orientalis] (GB:AAT08725.1); contains InterPro domain Histone H4; (InterPro:IPR001951); contains InterPro domain Histone-fold; (InterPro:IPR009072); contains InterPro domain Histon Range:  from: 2368834    to: 2369731    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version