Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             --------->ZAT2                                                           <---------CCA1(2)               <---------At4g35610                                                          ------->TEIL                     --------->At4g35610                                                       --------->ANAC46                 --------->MYB46(3)                                   --------->ARR14(2)  --------->ANAC55(1)             -------->P   <                                   <---------ARR14(2)  --------->ANAC58         ----------->GT1     <                                   ------->TEIL        --------->ANAC58        --------->ANAC58     <                                ----------->GT1      <---------ALFIN1          --------->ANAC46 <---- <---------ANAC46         ---------->DOF2          <---------ALFIN1            --------->ANAC58<----- ---------TOE2(3)        --------->AHL20(2)  ------>ZmHOX2a(1)                --------->SPL7   ------ ------->MYB52(1)        <---------AHL20(2)====================================HOX2a_HOX2a <---------ZAT2 ------GT1           --------->AHL20(2)    ------>ZmHOX2a(2)            ------>ZmHOX2a(1) -----------   ctaacgtatagattacatctctataaattaaagaacgtatattgatccttctcacacacgcatgtcttcgactcctctcatacggtactaaccagcagag  2348700           --------->ANAC58           --------->ANAC46           --------->ANAC58                                                                --------->ANAC58 ---------ANAC58                                                                           --------->ANAC46 ---------ANAC46                                                                           --------->ANAC58 ---------ANAC58                                                   --------->LBD16       <---------DOF5.7(2) -------HVH21                                                    ----------->RAV1(2)    <---------WRKY38(1) ----ARR14(2)                    ------>ZmHOX2a(1)   <---------AHL20(2)                 <---------WRKY45 --->ARR14(2) ------->TEIL       <---------YAB1      --------->AHL20(2)  ---------->DOF2<---------WRKY12 >RAV1(1)<-----------GT1   --------->ALFIN1<----------DOF2   <---------GLK1(1)   <----------DOF2   tcgcgtgcaattcacgcacttagttgagagtggtccttatagcatctttccccatttaaatagaaacccctgagttaaagactcttttagtcaacgcctc  2348800                                                      ----------->HVH21                                                     <-----------TGA1                                                     <-----------HVH21                                                    --------->ANAC46                                                    ===================bZIP_DOF                                                    --------->bZIP60(1)                                                    --------->TGA2(1)                                                    <---------TGA2(1)                                                    --------->bZIP60(2)                                                    <<<<<<<<<<HY5                                                    --------->ANAC55(2)                                                    <---------bZIP60(1)                                                    <---------O2                                                    <---------TGA1a                                                    --------->O2                                                    --------->TGA1a                                                   <-----------STF1                                         <---------ANAC58   <---------DAG2                                         <---------ANAC58   <----------DOF2       <-----------GT1                <-----------ARR10      <---------AHL20(2)<---------ALFIN1     --------->AHL20(2)  <---------ANAC58            ================================bZIP_DOF        <---------AHL20(2)  <--  <---------ANAC58            ---------->DOF2     <-----------GT1 <---------At4g35610    ----------->HVH21   tctcgcgttcttacaacaaatctatgcgaaccaaaagtcatttacttgtttttgacgtcacacttttcatctactagtatttattttctgtttgacacca  2348900                                                                                        <---------YAB1                                                                                   --------->YAB1                                                                                  --------->AHL20(2)                --------->AHL20(2)      --------->ARR11(3)                        <---------AHL20(2)           <---------TOE1(2)            <---------ARR11(3)           <----------DOF2  <-----------GT1           <---------TOE2(2)           --------->RVE1(1)         <-----------GT1 --------->ICU4       <---------HSFB2a(2)             --------->CCA1(1)    <----------DOF2  <---------MYB52(1)  ----       --------->HSFB2a(2)           --------->AHL20(2)<----------DOF2      ----------->GT1  -------- <-----------GT1<---------AHL20(2)   --------->YAB1  <------------------------ANAC81  --------->YAB1 -------DAG2 <---------ARR14(2)  --------->LBD16   <---------GLK1(2) <---------------AGL15   <-------   atttttcttctcgcagatttaaatcagacaaaacccgaataatatctcttacagtttcttttcttttattcctttctctggtaattaataacaattggtt  2349000     <---------ICU4                                      <<<<<<<<<TBF1                        *TSS ------->GT1               <---------WRKY12       <-----------GT1          <----------DOF2   -------- --->GT1                   <---------WRKY38(1) <----------DOF2  <----------DOF2           <---------- --MYB46(3)   <----------DOF2                 <------------------------ANAC81   <---------GLK1(2)   -   agaaaaatcattttctctttgcacataagtcaactctctctctctctctcttttacttcttcttctctttgccctctctttggattttcttccattgatg  2349100                                                <-----------ARR10                                                <---------ARR11(1)                                                --------->ARR14(2)                                                <---------ARR14(2)                                                --------->GLK1(2)             <----------DOF2                    ------->TEIL           --------->ZAT2                    <---------ANAC58           <---------At4g35610               <---------ANAC58            <---------TOE2(3)   --------    --------->WOX13(1)                   <----------DOF2                <-----------GT1    ------->GAMYB  <---------ATHB12          <---------ARR14(2) <---------ARR14(1)    --------->YAB1 <---------MYB46(3) ->YAB1    <---------ZAT2   --------->ARR14(2) <---------CCA1(2)    <---------AHL20(2)  --------->MYB52(1) --CBF     --------->At4g35610  ------>ZmHOX2a(1)                   --------->AHL20(2)  <---------DOF5.7(2) -------->WOX13(1)         XXXXXXXXXXXXXXXXXXXX>MIR776             --------->AHL20(2)  ----------->HVH21   aacaatcaatctcagctttgagttctcccaaatcctctattgactttgcgaatctaagaaaaaactgaaattaataacgtttttgatgggtaacggagta  2349200                               <---------------AtSPL3                        <----------DOF2                               <------ZmHOX2a(1)                             ------>ZmHOX2a(1)                          --------->ALFIN1                                 ==========================                          <---------AtMYB61                                ------>ZmHOX2a(2)                         <-------GAMYB                                    ===========================                         <------NtERF2                                    <------ZmHOX2a(2)                         --------->ATERF1(1)                             <---------ARR14(2)                        <---------ORA47(2)                               <---------GLK1(2)                        <---------MYB46(3)                               <---------ARR11(3)                       --------->ALFIN1     ------>NtERF2                --------->ARR14(2)                       <---------DEAR3(1)  ------>NtERF2               --------->LBD16         <-----                       <---------DREB2C(2) --------->LBD16            <---------HSFB2a(2)     <------               <-----------HVH21         --------->ATERF1(1)          --------->HSFB2a(2)   ---------         --------->ARR14(2)  <---------ANAC46                        <---------LBD16  <---------TOE2(3) --------->MYB52(1)<-----------RAV1(2)   <---------LBD16     <---------MYB52(1)       <---------TOE1(2) --->GT1 <---------ARR14(2)<---------MYB46(3)   ---------->DOF2  <<<<<<<<<TBF1        <---------TOE2(2)   acaaaactgagtatatgtttcacaggcggtggaggagaacgtctccggccaaaagacatctccgttcttcttccggatcctttagacgaaggtttaggtc  2349300                                                                                                  ---                                                                                                  <--                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                              -------                                                                                              <------                                                                                             <-------                                                                                      >>>>>>>>>SPL1                                                                                      >>>>>>>>>SPL4                                                                                    --------->LBD16              ----------->HVH21                                                    <---------ANAC46              <---------ETT(1)                                                     <---------ANAC58      --------->At4g35610                                                          <---------ANAC55(2)      <---------At4g35610                   ---------->DOF2              ------>NtERF2--------->SPL7  ------>ZmHOX2a(1)                  <---------ARR14(2) --------->At4g35610       --------------->AtSPL3 ========HOX2a_HOX2a --------->ARR14(2)  ------>ZmHOX2a(1)         --------->MYB52(1) >>>>>>>>>SPL5 ========HOX2a_HOX2a <---------ARR14(2) --------->TOE2(3)  <------ZmHOX2a(1)  --------->HSFB2a(1) --- ----ZAT18   --------->SPL7          --------->ARR14(2) <---------At4g35610   <---------HSFB2a(1)<--- -----HVH21<---------SPL7         <---------ICU4    --------->AtLEC2  ------->GAMYB<---------ANAC58-- >MYB59    <-----------HVH21     <---------ATHB12<-------TEIL   --------->ANAC46  --------------->AtSPL8   actccttctgctacgtccgaccagacccgactctaatcagttcctcaaaagtccattcagaggaagacacaacgacgacaacgttccgtacaatctccgg  2349400                                                                            <------NtERF2                                                                            ------>NtERF2                                                                            --------->LBD16                                                                           --------->DEAR3(1)                                                                           --------->RAP2.3(3)                                                                           --------->RAP2.3(2)                                                                           --------->RRTF1(2)                                                                           --------->RRTF1(3)                                                                           --------->RAP2.6(2)                                                                          --------->ATERF1(1)                                                                          --------->RAP2.3(1)                                                                          <------NtERF2                                                                          --------->DEAR4(2)                                                                          --------->RRTF1(1)                                                                         --------->ABI4(1)                                                                         ------>NtERF2                                                                        <---------DEAR3(1)                                                                        --------->DEAR3(1)                                                                        --------->RRTF1(2)                                                                        --------->RRTF1(3)                                                                        <---------ATERF1(2)                                                                        <---------ALFIN1                                                                        --------->RAP2.3(3)                                                                        --------->ATERF1(2)                                                                        --------->RAP2.3(2)                                                                       --------->RAP2.6(1)                                                                       --------->ATERF1(1)                                                                       --------->RRTF1(1)                                                                       <------NtERF2                                                                       --------->RAP2.3(1)       <---------DOF5.7(2)                                             --------->ORA47(2)     <---------MYB52(1)                                                --------->DEAR3(2)     --------->DOF5.7(2)                                               --------->ERF1    <-----------HVH21                                                  --------->DEAR4(2)    <-------GAMYB                                                     ------>NtERF2 ------>ABI4(2)                                                       <---------RAP2.3(1) -------ATERF1(1)                                                     <---------ATERF1(1) >NtERF2                                                             --------->ANAC46 ----ATERF1(1)         <---------ALFIN1                             <---------ABI4(2) --->LBD16         <---------At4g35610                         --------->MYB46(3) -->ANAC46   ----------->RAV1(1)                        <-----------HVH21<---------ATERF1(1) ---DEAR3(1) ------>NtERF2 ------>ZmHOX2a(1)         --------->SPL7 --------->ZAT18  --------->ANAC58 --LBD16--------->At4g35610============================HOX2a_HOX2a <---------ATERF1(1)   --------->ANAC58 --->NtERF2 --------->DEAR3(1)                      --------------------->WRI1     ---------->DOF2 ------DEAR3(1)<---------ALFIN1                     --------->STY1(1)<---------DEAR3(1)  --------->ANAC58 ------->ATERF1(1) <---------ZAT2               <------ZmHOX2a(2) <---------DEAR3(1) --------->ANAC58   cgcttccgttagcgccaacacagctactcctctctcaacttctctctacgatccctacggtcacatcgaccgcgccgccgcattcgaaagcacgacttca  2349500                                                                         --------->HSFB2a(1)                                  <---------LBD16                        --------->HSFC1(2)==========                            ---------->DOF2               <---------ARR14(2)               ==========                      <------ZmHOX2a(2)     ------>ZmHOX2a(2)            <---------HSFB2a(1)        =                     --------->ARR14(2)    <------ZmHOX2a(2)       ---------->DOF2         <------ZmHOX2a(2)                  --------->MYB46(3) <-----------HVH21    --------->ARR14(2)    <-----------HVH21   <     --------->WOX13(1)  --------->LBD16  <---------MYB52(1)    <------ZmHOX2a(2)    <-----------HVH21  --------->TOE2(3)  <---------ARR14(2)--------->SPL7     <-----------HVH21    <----------DOF2-------   ttttcgtcaatccctcttcaaccgatccccaaaagctccggtccgatcgttttaggctcgggtccgatcgaaagagggttcctttcaggtccgatcgaaa  2349600  Previous    Next  AGI:  At1g07630.1    Description:  PLL5 (POL-like 5); protein serine/threonine phosphatase. Identical to Probable protein phosphatase 2C POLTERGEIST-LIKE 5 (PLL5) [Arabidopsis Thaliana] (GB:Q9LQN6;GB:Q8LFF0;GB:Q9ASX4); similar to PLL4 (POLTERGEIST LIKE 4), protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT2G28890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21669.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15644.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR015655); contains InterPro domain Protein phosphatase 2C, N-terminal Range:  from: 2349094    to: 2351689    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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