Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                       <------NtERF2                                                                     --------->ATERF1(1)                                                                    <---------ATERF1(1)                                                                    ------>NtERF2                                                                    <---------RAP2.6(3)                                                                   <---------RAP2.6(2)                                                                   <---------ATERF1(2)                                                                   --------->DEAR3(1)                                                                   --------->ATERF1(2)                                                                  --------->DEAR3(2)                                                                  --------->RAP2.6(3)                                                                  --------->ATERF1(1)                                                                 --------->MYB52(1)                                              <-----------GT1 --------->TGA1a                                          <---------AHL20(2)  =========================bZIP_DOF                                        <---------YAB1        <---------ANAC58                   <---------ANAC58    <---------AHL20(1)     <---------TGA1a                   <---------ANAC58    <---------AHL20(2)     <---------ANAC58         ----------->GT1             <---------AHL20(2)      <---------TOE1(2)   ------>ZmHOX2a(1)              <---------AHL20(1)        ------>ZmHOX2a(1) ----------------->AGL1           --------->AHL20(1)       --------->TOE1(2)  <-----------GT1 ------->ARR11(3) <---------TOE2(3)  <---------YAB1        --------->TOE2(2)<----------DOF2 --------ARR11(3)<-----------GT1 --------->YAB1      ------>ZmHOX2a(1)  <------NtERF2           <----   aggtcctgaattggtgaatttacgttccatcacaaaaatattattttttgacttcctagttcctacgtgccggcctcgttttactgatcaataacttggc  2341100                                        <---------ARR11(3)                                        --------->ARR11(3)                                       --------->YAB1                                      <---------TOE1(3)                                      <---------YAB1                                --------->AHL20(2)                                <---------AHL20(2)                            <---------AHL20(2)                         --------->AHL20(2)       <----          --------->DAG2   <---------YAB1<---------YAB1                --------->YAB1        --------         ---------->DOF2  --------->AHL20(2)                          <---------ATHB12      --------- --------->YAB1  --------->MYB52(2)   <---------TOE2(3)  --------->AHL20(2)                 <-------- -----ANAC46 --------->ALFIN1  <---------AHL20(2)    <---------TOE2(3)<---------ATHB51    <---------TOE2(3)   ctataatatcaaaaagtggtagtggcatttttatttatttaagataatagacatttagattatatagttgcaataatatagagtttttagttaagatata  2341200                                                                                              <------                                                                                              -------                                                                                            ---------                                                                                        --------->ARR14(2)                                                                    <---------AHL20(2)  <---------ARR11(3)                                                                  <---------RVE1(1)     --------->ARR11(3)                                   <---------GLK1(2)              <---------CCA1(1)     <---------ARR14(2)    <-----------GT1          --------->AHL20(2)                  --------->ARR11(3)     --------->GLK1(2) -----TOE2(3)                <---------AHL20(2)          --------->ARR11(3)     <-----------GT1<----- ->CCA1(2)               --------->AHL20(2)              <---------ARR11(3) <---------RVE1(1)-------- >ARR11(3)              <---------AHL20(2)             <---------YAB1       <---------CCA1(1)-------- -ARR11(3)           ----------->GT1            <---------ICU4   <---------ARR11(3)     <-----------ARR10   ggttttatacatgttgtcttaaatagttaaattaaaagattattttgtaatcttgtcaagatagtgagatttttttggatatttactcaaaatctgccga  2341300            <---------ARR11(3)            --------->ARR11(3)      --------->ARR11(3)                                                                   --------->ANAC46      --------->GLK1(2)                                                                    --------->ANAC58      <---------ARR11(3)                                                                   --------->ANAC58 ---------AGL15                                                                         --------->ARR14(2) -------->AGL15                         ---------->DOF2                              --------->YAB1 >At4g35610<---------CCA1(2)          --------->ANAC58<---------ARR11(3)            <---------ATHB12 ----RAP2.6(3)                        --------->ANAC58--------->ARR11(3)       --------->ZAT6 --------->AGL2         --------->AHL20(2)          ------->TEIL              -------->P<---------ARR14(2) --------->AGL1<---------HSFB2a(2)----------->RAV1(1)<---------CCA1(2)   XXXXXXXXXXXXXXXXXXX>MIR3434   aattagaaaatctatatctagagggattatatagtccaacaagaaagctatatgtatatctcatatacaaaaactttgctaaccctatcatatacgaaac  2341400                                                       --------->AHL20(2)                                                       <---------AHL20(2)                                                       ----------->TBP                                                     ----------->TBP                                  <-------GAMYB      <---------AHL20(2)                                 <---------MYB46(3)  --------->AHL20(2)                                 <------MYB83      ----------->TBP                                 <------MYB46(1)   --------->AHL20(2)                       --------->AHL20(2)         <---------AHL20(1)         --------->CCA1(2)                      <---------AHL20(1)       --------->AHL20(2)         <---------MYB46(3)                      --------->AHL20(1)     <---------ARR11(3)          <---------ANAC46   <--------                     --------->AHL20(2)      --------->ARR11(3)        <---------ANAC46 <---------RVE1(1)                 --------->AHL20(2)      ---------->DOF2      <------ZmHOX2a(1)----------->TBP         <------ZmHOX2a(1)      <---------AtMYB61 --------->AHL20(1)  <---------AtMYB61<---------MYB52(1)   taaaacttacaggaaaatataaaatatatatagggaggttgacaaaagataatatatatatataggaaatgtatggtggatataaaaccgatattttata  2341500                                                    >>>>>>>>>TBF1                                                --------->At4g35610                                        --------->DAG2                                       *TSS   <-----------RAV1(2)                                       ---------->DOF2                        --------->YAB1         <-----------GT1            <---------ANAC55(2)  ---------->DOF2     <---------ATHB12     ----------->TBP     --------->MYB52(2)  --------->At4g35610 <----------ID1---------->DOF2      < -AHL20(2)             <---------MYB52(1)   ------------------------>ANAC81--------->WOX13(1)       =   ttcttctatatatactggccattcccttagttgaaatcacataaagcatcagaagaagaaaaagaaaactacaaaatcaatcaaagagaagtaagagaaa  2341600                             ------>ZmHOX2a(1)          <------------AtMYB77  <------MYB46(1)<-----------RAV1(1)  --------->HSFB2a(1)      ----------->RAV1(2)   <-----------RAV1(2)  <---------HSFB2a(1)     ------>ZmHOX2a(1)  <---------ANAC46             --------->TOE2(3)  <---------HSFC1(2)     <---------ALFIN1<---------MYB46(3)     --------->GLK1(2)  <------MYB83   ======================RAV   <---------ANAC58  --------->ARR14(2)              <----- <---------TOE1(2)     <---------ATERF1(1)   <---------ANAC58  <---------ARR14(2)             <------ -----------RAV1(2)--------->ALFIN1   ----------->GT1          <---------GLK1(2)      --------->AtLEC2 ============================RAV     --------->ALFIN1        ----------->ARR10     <---------YAB1   tggcaggttctaactgtggatgtggctcctcctgcaaatgtggtgattcgtgcaggtaaaccctagattctctcttcattaacttatcatgcatatatat  2341700               <---------ANAC55(2)                                                     <---------ARR11(3)          ----------->GT1 <---------YAB1                                         --------->HSFB2a(2)          <---------MYB46(3)  --------->AHL20(2)                                 <---------HSFB2a(2)        <-------MYC3   ------>ZmHOX2a(1)               <---------MYB52(1)       <---------ANAC46        ------->MYC3  --------->TOE2(3)               <-------GAMYB             <---------ANAC58    <-------TEIL      --------->TOE1(3)  <---------ARR11(3)                     <---------ANAC58 ----ARR11(3)  --------->ANAC55(2)       --------->ARR11(3)          ----------->HVH21 --------->ARR11(3) ---CCA1(2)<-------GAMYB  <---------TOE2(3)          <-----------RAV1(1) ---------->DOF2    ---------   ctaatatacatgtggttacatattccttaagataaatttttgaaatcttatacttctgttgtttttttggtatgacaaagttgcgagaagaactacaaca  2341800                                         --------->WRKY18(1)                                      --------->LBD16                                     <---------ANAC58                                 <---------ZAT2                                 --------->At4g35610                                 ================================RAV                                -                                 <---------At4g35610                                           ------                                 --------->ZAT2 --------->At5g28300                            <-----                                 ----------->RAV1(2)                                  --------->ANAC58               <---------At4g35610   <---------ANAC58                  <---------AtLEC2       -------  ----------->GT1      <------ZmHOX2a(2)<-----------HVH21           --------->YAB1    --------->ANAC58  --------->ALFIN1 --------->ALFIN1  <---------ANAC46           --------->ICU4      --------->TOE1(2) >REM1(1)      --------->At4g35610  <---------LBD16  <-----------RAV1(1)            --------->TOE2(2)   aggagtgtgataactgtagctgtggatcaaactgcagctgcgggtcaagctgtaactgttgaagaaattatcagcatggtctcaaaccaaggaaaatggg  2341900                                                                                                 <---                                 <-----------RAV1(1)                                             <---                         <----------DOF2                           --------->ICU4            <-------                        ------>ZmHOX2a(2)                     --------->ANAC55(2)           <--------                       <------ZmHOX2a(2)                      <---------ANAC46              <--------                      --------->ARR11(3)                      <---------ANAC58              <--------                      --------->AGP1                          <---------ANAC55(2)       <---------ANAC58 -------->AHL20(2)    <---------ARR11(3)                      <---------ANAC58          <---------ANAC58 ----->GT1           --------->GLK1(1)                        <---------ANAC55(1)     <---------TOE2(3) -----ID1            <---------GLK1(1)    ---------->DOF2   <---------ANAC46          <---------YAB1 ---->GT1    <---------YAB1     ------->TEIL             <-----------RAV1(1)    --------->ICU4 <-----   aaaaaaatgtgttttatgctaagagatctttgtgtatgttggaataaagacttggcattgtgttgcgtaatgagtaagagtaactattaagcttgcttga  2342000  Previous    Next  AGI:  At1g07610.1    Description:  MT1C (metallothionein 1C). Identical to Metallothionein-like protein 1C (MT1C) [Arabidopsis Thaliana] (GB:Q38804); contains InterPro domain Plant metallothionein, family 15; (InterPro:IPR000347); contains InterPro domain Mollusc metallothionein, family 2; (InterPro:IPR001008) Range:  from: 2341539    to: 2342120    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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