Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           <----------ID1                                       --------->YAB1                                    ------>MYB46(1)     <------NtERF2                  ------>MYB83    <-----------TGA1             --------->MYB46(3)   <---------ANAC46             --------->ANAC58   <---------ANAC58             -------->P   <---------ANAC58             ------>MYB46(1)   <---------bZIP60(1)          ------>MYB83   --------->bZIP60(1)          --------->ANAC58                                    ----------->HVH21  ---------->ID1           --------->ANAC58                                      --------->ARR14(2) --------DOF2              --------->ANAC46                                      <---------ARR14(2) --->ARR11(3)              --------->ANAC58                    <-----------TGA1  --------->GLK1(2) ----ARR11(3)            ------>ZmHOX2a(1)        --------->DAG2                ------>MYB83 ---CCA1(2) --------------->AtSPL8------->GAMYB  ---------->DOF2                ------>MYB46(1)   ctttggcgtcatacttcgtactcgctcctaagccaaccaaataagaacaaaaaaagtattagtttcgtcatacattcgaaccaaatctgacagaaacacc  2333000                 ----------->GT1                ----------->GT1    <---------TOE1(3)         --------->TOE2(3)         <---------TOE2(3)               <---------ANAC58         ---------         --------->TOE1(3)     <----------DOF2      <-----------ARR10----------->HVH21      ---------   --------->TOE2(3)     --------->YAB1       <----------ID1       <---------ANAC58  <------ZmHOX2a(1)   --------->TOE1(3)    XXXXXXXXXXXXXXXXXXXX>MIR829.2         <----------DOF2 --------->MYB52(1)   taaaaccctaacctcagattggaaaaatcaaaactttaaggtaatgaaacaacaaatctaagtactttgccttgacagaataacagaggaacagaagcca  2333100                                                                                           --------->ANAC46                                                                                    <---------ZAT18                                                                             <---------WRKY18(1)                                                                            --------->WRKY45    <----                                                                            --------->WRKY38(1) -----                                                                            --------->WRKY12   ------                                                                            ----------->HVH21  <-----                                                                          <----------DOF2---------->DOF2                 <-------TEIL                                           --------->ZAT2 --------->ANAC58      ------>ZmHOX2a(1)                                                 <---------At4g35610--------->ANAC58     --------->TOE2(2)                                                  --------->At4g35610--------->ANAC58     --------->TOE1(2)                                                  <---------ZAT2 --------->ANAC58  --------->GLK1(2)                  --------->DAG2              <---------At4g35610<---------ZAT14 <---------GLK1(2)         <---------YAB1                        --------->At4g35610--------->ZAT14 >ANAC58 <---------HSFB2a(2)        ---------->DOF2              --------->ZAT2----------->RAV1(2) >ANAC58 --------->HSFB2a(2)     <------ZmHOX2a(1)          ----------->RAV1(2)<---------At4g35610   aaagattcctacgagaaggctcatagtttgtgataggaaaaagcatttgaagtaatgtgtttacctgagctctcagctttgacctgagcactcaagcaaa  2333200         ----------->GT1      <---------WOX13(1)    --------->ATHB12   <---------ATHB12   <---------YAB1   --------->ICU4                               --------->At4g35610                         --------- -----ARR14(2)                              --------->ANAC46                       --------->CCA1(2) ---->ARR14(2)                              --------->ANAC58       <---------AHL20(1)      --------->DAG2 --->GLK1(1)                                --------->ANAC58       <---------ARR11(3)     --------->DAG2 ----GLK1(1)                   ----------------------->TaNAC69(2)  --------->AHL20(1)    ---------->DOF2   tccccatgattgagtaatttcagagagagagggaaccaagttggacacgcttctgcaatcttctcacaatatatcacacttgaagataagaaaaaggtag  2333300                                                                             ------->GAMYB                                                               ----------->HVH21                        --------->ICU4                       --------->CCA1(2)                      ---------->DOF2               <---------TOE2(3)       --------->MYB46(3)                --------->ZAT2                    ---------->DOF2         <-----------GT1                <---------ZAT2               ----------->GT1<---------ARR11(3)  ------->GAMYB                <---------At4g35610 <---------GLK1(1)       --------->ARR11(1)-------->P    *TSS <----------DOF2--------->At4g35610 --------->GLK1(1)     ----------->ARR10 <---------MYB111(1)    <- -->GT1<---------ATHB12------------------------>ANAC81  ---------->DOF2----------->GT1     ------->TEIL   aaacttttaatcaatggaagctggaaaagatgagaaggaaatcaaattggtttaaaggaaaagatttgacaactagtaacaaccccaaaaatgtatgcac  2333400                                                      --------->MYB46(3)                                                    ------>MYB46(1)                                                    ------>MYB83                                                    --------->MYB52(1)                <---------GLK1(2)                                                  <---------MYB59               <----------ID1                                            --------->ANAC55(2)               ---------->DOF2                                        <----------DOF2                      <---------AHL20(2)                                     <---------------AGL15                <---------ICU4                                     --------------->AGL15               <---------ATHB51                                    ----------------->AG   --------->MYB52(1)--------->AHL20(2)          ----------->HVH21         ----------------->AGL1------->GAMYB  --------->AHL20(2)        --------->At4g35610         <-----------------AG <---------MYB52(2) <---------YAB1  ---------->DOF2        <---------CCA1(2)  <---------ANAC55(2)          --------->ICU4            <- ---------DOF2     <-------TEIL<----------DOF2 <-----------GT1           <---------AHL20(2)       <--   actttaaagcatatgaccaagttcatcaaatctcttttgccgatttaagtaacctaacaactaacacatgaagaaataattaaagacaaattcttactca  2333500                                                                                                    -                                                                                                    -                                                                                                  <--                                                                                                 ----                                                                                                 ----                                                                                                 <---                                                                                 --------->TOE2(3)---                                                                           <------MYB46(1)       <---                                                                           <---------MYB46(3)   <----                                                                           <------MYB83        <-----                                                                          <---------AtMYB61   ------>ZmHOX2a(2)                                                                          --------->ALFIN1   <------ZmHOX2a(2)                                                                        <---------ANAC58    <--------                                                                        <------MYB83        ---------                                                                        <---------ANAC58   <------NtERF2                                                                        <---------ANAC46 <---------ANAC46         <-----------GT1                                               --------->MYB111(2)<---------MYB46(3)        <-----------GT1                                  ---------->DOF2<------MYB46(1) <---------LBD16 ---------DOF2                                    --------->ALFIN1     <---------MYB46(3)<---------ANAC58 -------DAG2   <----------DOF2                  --------->ALFIN1       --------->MYB55(2)<---------ANAC58   ccttttttttttatcttctttgttctgagccaagagattgagagaagagagtgtgtgagaaaagccttgtagttgggtggtagcattaatggcggatcgg  2333600        <----------DOF2    <----------DOF2   <----------DOF2   <---------DAG2 ------>NtERF2 --------->LBD16 -------->ANAC58 -------->ANAC58 -------ATERF1(1) ----->PCF2                                                  <---------YAB1 ----->PCF5                                               <---------YAB1 ------TCP20                                           <---------AHL20(2) ------>SPL7                                           <---------YAB1 ------TCP15(1)                                     <----------DOF2 -------HVH21                                    <---------ALFIN1                                <--- ----DEAR3(2)                --------->YAB1 <-----------GT1--------->ATHB51                     <---- -ARR14(2)            <----------DOF2   --------->YAB1 --------->AHL20(2)                    <------- >ARR14(2)        <----------DOF2--------->GLK1(1)  <---------DAG2                          <--------   tcccgcctttctttgtttctctttctttctatcagaaatcaaaaattatccccactttttattattgttgtcatttctctaaatcgttttcgttttagcc  2333700                           --------->ICU4                           <---------YAB1                      --------->CCA1(2)                     <---------ARR11(3)                     --------->ARR14(2)                                                             <                     <---------ARR14(2)                                                             - --------------->AtSPL8  --------->YAB1            ---------->DOF2                                 -- <---------------AtSPL8 <---------YAB1--------->At4g35610                <---------ANAC58          <- -------DOF2         --------->ARR11(3)        --------->ICU4            <---------ANAC46          <- -----DAG2           --------->ARR11(1)      ---------->DOF2             <---------ANAC58      <----- ----GT1           ----------->ARR10  <---------At4g35610     --------->ANAC46               <------- ---GT1       ---------->DOF2    <---------bZIP60(1)      <-----------HVH21                <---------At4g35610   tttttggtactacaaaaaaagaagatatgatgatgaagtcagcatagaaaagattaagcccttcacatcacagaagcgtgttcaatcgctctcagccgtt  2333800          <---------YAB1          <---------TOE2(3)         <---------DOF5.7(2)       --------->DOF5.7(2)      --------->TOE1(3)                                                               ---------->DOF2      --------->TOE2(3)                                                           <---------TOE1(3)     <---------ANAC46                                                             <---------TOE2(3)    <---------TOE2(3)                                                            --------->MYB52(1)  ----------->TGA1                                                       <---------At4g35610  ----------->HVH21                                                      --------->At4g35610 =================================HOX2a_HOX2a                          <---------RAP2.3(2) ------>ZmHOX2a(2)                                                     <---------DEAR3(1)          -- ---------At4g35610                                                    <---------RAP2.6(2)  --------- -------->At4g35610                                                   --------->SPL7--------->TOE1(3) ------->ARR14(2)                                                     --------->ABI4(2)     --------- --------ARR14(2)                                  <------ZmHOX2a(1) --------->ALFIN1<---------MYB52(1) --------AGP1                               <---------ZAT2 <---------ANAC58   <---------ANAC55(2) --- ----MYB52(1)                      ---------->DOF2<---------ZAT18 <---------DEAR3(1)--------->TOE2(3) --MYB46(3)                ------>ZmHOX2a(1)--------->ZAT2 <---------ANAC58   --------->ANAC55(2) ---   ggatctgacgttaacattgtattgtagtcctccatgttaaagctccagctagaggacttaggcttggctcggtgcggctcacttaacgttaagctcgtaa  2333900  Previous    Next  AGI:  At1g07570.1    Description:  APK1A (Arabidopsis protein kinase 1A); kinase. Identical to Protein kinase APK1A, chloroplast precursor (APK1A) [Arabidopsis Thaliana] (GB:Q06548;GB:Q9LNY0); similar to APK1B (Arabidopsis protein kinase 1B), kinase [Arabidopsis thaliana] (TAIR:AT2G28930.3); similar to APK1B (Arabidopsis protein kinase 1B), kinase [Arabidopsis thaliana] (TAIR:AT2G28930.2); similar to protein kinase [Brassica rapa] (GB:BAD12263.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 2331167    to: 2333392    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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