Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                ------->MYC2                                              <-------MYC3                                             <---------ANAC58                                             =====================================================MYC_MYB                                             <---------O2                                             <---------ANAC58                                             <---------ANAC46                                             --------->ANAC55(2)                                             --------->O2                                             <---------ANAC55(2)                                     --------->WOX13(1) <---------ANAC46                        <----                                  --------->LBD16       <---------ANAC58                        -----                                 <---------LBD16        <---------ANAC58                       <-----                     --------->GLK1(1)       <---------TGA1a                           <-----------TGA1                     <---------GLK1(1)       --------->TGA1a                          ------->GAMYB                     --------->CCA1(2)       =============MYC_MYB                    --------->MYB46(3)                    ---------->TaMYB80  <---------ICU4 <------NtERF2                 <------------AtMYB77                    <---------ARR14(2)  --------->YAB1 --------->ALFIN1           --------->MYB46(3)                    --------->ARR14(2) <---------ATHB12--------->ATERF1(1)     <---------ICU4  <-----         --------->ZAT18      --------->ARR14(2)    --------->ATERF1(1)        --------->YAB1  ------        --------->ALFIN1      <---------ARR14(2)--------->REM1(2)             <---------YAB1   ------     --------->ALFIN1<----------TaMYB80--------->ICU4 <-----------HVH21     <---------ICU4     <-----     <---------AtMYB61       --------->GLK1(1)<-------MYC2                  --------->YAB1    <------     <---------DEAR3(1)      <---------GLK1(1)------->MYC3                 --------->ICU4     <------   --------->LBD16 <------NtERF2<---------LBD16--------->ALFIN1          --------->YAB1<-----------HVH21 <---------LBD16 <---------ANAC46--------->ANAC46<--------P        <---------At4g35610--------->ANAC46   ctcaccggaggtggacaaggcggatatgctggtatccggcaatcatcacgtgtaggcgtcgtgcatcccatctgataatcatcatcaaccgtcaccgtat  2305000                                                       --------->DAG2                                                 --------------->AGL15                                                 <---------------AGL15                                                <-----------------AGL1                                                ----------------->AGL1                                                ----------------->AGL3         <---------TOE1(2)                      <-----------------AGL3     <------NtERF2                              <-----------------AG   <---------DEAR3(1)                        <----------DOF2 -----GLK1(1)                              <---------TOE1(2)                        --------->ZAT6 ---->GLK1(1)                           --------->ANAC58                          <-----------GT1 ------ARR10                       <----------DOF2------>ZmHOX2a(1)            <---------ICU4 ----ARR14(2)                    --------->At4g35610   <---------TOE2(3)     <----------DOF2 --->ARR14(2)                    <---------At4g35610   <---------TOE1(3) <---------ANAC58          -- ->TEIL  <---------TOE2(2)       <------NtERF2  ----------------->AG <------------CBF  -------------- ----ARR11(1)                  --------->ZAT18  <-----------------AGL2<---------WOX13(1)     <------- ---CCA1(2)         ------>ZmHOX2a(1)   --------->ANAC58   <-------TEIL  <---------ANAC58    -------- ---ARR14(1)  <-----------GT1  <---------ZAT18  =====================================================   ctccgtcgtcgtagtttttctcctccatttttgtccgctctctcgcactttcctaataaggttcttaattagattgcttctttattacactagttttgga  2305100                                                                         ------->MYC3                                                                         ------->PIF4                                                                         <-------PIF4                                                                         <-------MYC3                                                                         ------->PIF5                                                                         ------->MYC4                                                                         <-------MYC2                                                               <---------SPL7                                                              --------->ANAC58                                                              --------->ANAC58                                                              <---------HSFB2a(1)                                                      --------->ALFIN1   <-------MYC4                                                     <-------MYC3        <-------PIF5                                                     ------->MYC4        ------->MYC2                                                     ------->MYC2       <---------O2                                                     <-------PIF5       --------->TGA1a                                                     <-------MYC4       --------->ANAC55(2)                                                     ------->PIF5       <---------TGA1a                               <---------ANAC58      <-------MYC2       <---------ANAC55(2)                               <---------ANAC58      ------->MYC3       --------->O2                           <------MYB83             <---------TGA1a     --------->bZIP60(2)               --------->HSFB2a(2)      --------->HSFB2a(2)   --------->HSFB2a(1)               --------->HSFC1(1)       <---------HSFC1(1)   --------------->AtSPL3             -----        <---------ANAC58   <------MYB46(1)          --------->TGA1a     =================bZIP_DOF        <---------ANAC46  --------->MYB59           <---------O2      <---------ALFIN1          <---- --------->HVH21        <---------ANAC58--------->HSFC1(1)   <---------------AtSPL3             <---- ->AGL15<---------ANAC58<---------ANAC58<---------HSFB2a(2)<------ZmHOX2a(1)  ---------->DOF2 <------ --HSFB2a(2)   <---------HSFB2a(2) <---------ANAC58 --------->O2 --------->SPL7      ----------->GT1 ->HSFB2a(2)   <---------HSFC1(1)  <---------ANAC58 =====================================bZIP_DOF --- ==MADS_MADS  <---------LBD16 <-------TEIL          --------->ANAC46  <------------OsbHLH66   =======   agtgaccgtagcttgttctggaagttgctaggtacttgcggtctagaaacttacacgtggaggaacgtactgccacgtgctaaagcgtagttatattcag  2305200                      <---------ALFIN1                     <---------ZAT18 ---->ZAT2         --------->ANAC58                     ----------->GT1 -----ZAT2 ----------->RAV1(1)                       <---------ANAC58 -----At4g35610    --------->ANAC46                  <---------ANAC46        <---------At4g35610 -----RAV1(2)<---------ALFIN1                        <---------ANAC58        --------->At4g35610 ------>ALFIN1     --------->ANAC58             <-----------RAV1(1)         <---------TOE2(3) ======================RAV                 --------->YAB1                 ---------->DOF2        <---   gtgggaatagttgccacacataccccactcgagtcaaatgctcgtttataatgtggcttagttaaaacgaagcccattaagctaaacaagggcccgaatt  2305300                              <---------GLK1(1)                              --------->CCA1(2)                             --------->ARR11(3)     <------MYB46(1)                             --------->ARR14(2)     <------MYB83                             <---------ARR11(3)     <---------MYB46(3)                             <---------ARR14(2)    <---------AtMYB61                             <---------GLK1(2)    <---------MYB52(1)                             --------->ARR11(1)   <--------P                         ---------->DOF2          <---------MYB55(1)                      --------->TOE2(3)          <---------MYB52(1)                                 -                     --------->ANAC58        --------->MYB52(1)                            --------->ANAC58                     --------->ANAC46   --------->AHL20(2)                                 --------->ANAC55(1)                     --------->ANAC58  <---------AHL20(2)                                  --------->ANAC46    <---------At4g35610  <---------DOF5.7(2)--------->MYB52(1)                            <---------LBD16    --------->At4g35610--------->DOF5.7(2)  <-----------GT1                 ----------->GT1--------->ANAC58 --------GT1      --------->MYB46(3)   --------->AHL20(2)                  *TSS           --------->LBD16   tactggagctaaggccattaaccacgttaaagatttgcgaaataaataaccggttggtttttagttgaaagactaaaccggttgaaataatccacggaac  2305400                                                          ----------->HVH21                                               --------->At4g35610                                               --------->ZAT2                                               <---------At4g35610                                           --------->ANAC58                                <---------ANAC58        --------->ALFIN1         ------->GAMYB                --------->HSFB2a(2)        --------->ANAC46                     <---------MYB52(2)                <---------HSFB2a(2)        --------->ANAC58     --------->AHL20(2)        --------->YAB1      <-----------RAV1(1)       <---------ANAC58        ----------->GT1         --------->MYB46(3) ---------->RAV1(1)             <---------ANAC46    ---------->DOF2         ------>ZmHOX2a(1)<-------   aacaacatatgttggagtctggaacgcgttgatgtcttggttcccaagcagctcaaaagtgtgacataaattgttgtcctcaacaaacaccataaaaatc  2305500                                                                                                  ---                                                                                                  ===                                                                                              <------                                                                                        ------>NtERF2                                   <---------ALFIN1                                  <---------At4g35610                               --------->MYB46(3)                                    --------->At4g35610                               <---------ATHB12                                      <---------ZAT2     <---------ANAC58        --------->WOX13(1)    --------->AHL20(2)                --------->ZAT2     <---------ANAC58  <---------AHL20(2)  <-----------GT1   <-----------GT1      ---------->DOF2<--- --ICU4          <----------DOF2--------->YAB1 ----------->GT1  <----------DOF2  --------->AtMYB61---   acaaatttcgttctgggctctttatttttttcaatcaccacattttcacttgttaaaattttgttactttgctctatctgaaaccaaagctgccatcttt  2305600                      <-----------------AG               <----------DOF2                    ------>ZmHOX2a(2)                    <---------DAG2                   <------ZmHOX2a(2)                 --------->ZAT18                  <---------AGP1                     <---------ZAT18                  <---------ARR11(3)               <---------ZAT2                  --------->ARR14(2)               <---------At4g35610                  --------->ARR11(3)               --------->ZAT2                  <---------ARR14(2)            <---------ANAC58                 <---------CCA1(2)              <---------ANAC58 <----------DOF2----------->ARR10       --------->AHL20(1)                                          < ------->ID1--------->ATHB12            <---------AHL20(1)                           --------->ARR11(3) =======================================MADS_MADS  --------->At4g35610               <---------ARR11(3) ----DOF2  <---------YAB1 <----------DOF2     <---------YAB1                 ----------->HVH21  ----- --------------AGL2--------->GLK1(1)    --------->AHL20(2)                 --------->At4g35610  <---- ------------>AGL15<---------GLK1(1)    <---------ARR11(3)           <---------YAB1 --------->YAB1  <   ctccttttgggttttgattagatctccgattttgggtttctatatattatgcgagctcacttttgttcgttctgattatctgacaatgatattctccaag  2305700                                          <-------GAMYB                                         <---------ANAC58                                         <---------ANAC58                               <---------TOE2(3)                               <---------TOE1(3)                               <---------TOE1(2)                                                 <--- ------MYB83         ------>ZmHOX2a(1)   <---------ANAC46                                     <------ ---->ZAT2        <------ZmHOX2a(2)   <---------MYB52(1)    ----------->HVH21             ------>ZmHOX2a(1) -----ZAT2       --------->ARR14(2) --------->MYB52(2)   <-----------GT1          --------->AHL20(2) ------MYB46(1)  <---------ARR14(2)<-------TEIL     <----------DOF2----------->GT1<---------AHL20(2)   cttggttcttccctcgctcgatcctcacgttctaaggttcgtttcgttgtgatgctttttttccgacgcttgttaattttgtgtttaatttcctattttt  2305800                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                      --------->GLK1(2)                                                                                      --------->ARR14(2)                                                                                     <---------ARR14(2)                                                                                     --------->ARR14(2)                                                                                  <------NtERF2 -----                                                                                 <------NtERF2 <-----                                                                                 ------>NtERF2 <-----                                                                                 --------->LBD16<----                                                                                 --------->At4g35610                                       <---------ANAC46                          <---------At4g35610                                       <---------ANAC58                         --------->RAP2.3(3)                                     <---------MYB46(3)                         --------->RRTF1(2)                                    <---------DEAR3(1)                          --------->RRTF1(3)                                    <---------AtMYB61                           <---------ANAC46<----                                    --------->ALFIN1                            ----------->RAV1(1)                                   <---------ABI4(1)                           --------->RAP2.6(1)  <                                   <------NtERF2                               --------->ATERF1(1)  <                                  <---------MYB46(3)                           --------->RRTF1(1)<---                                 --------->ALFIN1                              <------NtERF2   ------                                 <---------DREB2C(2)                           --------->DEAR4(2)----                                 <---------DEAR3(1)           --------->MYB52(1)--------->RAP2.3(2)--                                <---------ABI4(1)           --------->MYB46(3) --------->RAP2.3(1) --                              --------->ANAC46 ------>ZmHOX2a(2)              <---------ATERF1(1)<---                              <---------DEAR3(1)    <------NtERF2        <---------ANAC58      <-----                             --------->SPL7    <---------DEAR3(1)     <---------ARR14(2)       <-----        ----------->GT1    --------->ZAT14    <------ZmHOX2a(2)       --------->ARR14(2)      -------        --------->LBD16    <---------ZAT14   --------->ARR14(2)     <------MYB46(1)  <---------GLK1(2)      <---------LBD16      <---------SPL7    <---------ARR14(2)     <------MYB83--------->DEAR3(1)--- --------GT1          <---------GLK1(1)<---------ANAC58   <-----------GT1<---------ANAC58     ------- ---AHL20(2)      <---------TOE2(3)<-------GAMYB  <---------DEAR3(1)<---------MYB46(3)<---------ARR14(2)   ttcaattttccggtgaaattagggatttgtgtacggcggtggtgtgagatcggcggtatttaaccaagggaggttacgagcgccgcagaatctcgaggcg  2305900  Previous    Next  AGI:  At1g07500.1    Description:  unknown protein Range:  from: 2304763    to: 2305028    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g07510.1    Description:  FTSH10 (FtsH protease 10); ATPase. similar to FTSH3 (FtsH protease 3), ATP-dependent peptidase/ ATPase [Arabidopsis thaliana] (TAIR:AT2G29080.1); similar to hypothetical protein OsI_019542 [Oryza sativa (indica cultivar-group)] (GB:EAY98309.1); similar to AAA-metalloprotease FtsH [Pisum sativum] (GB:AAK77908.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21625.1); contains InterPro domain AAA ATPase, conserved site; (InterPro:IPR003960); contains InterPro domain Peptidase M41, FtsH; (InterPro:IPR005936); contains InterPro domain Peptidase M41; (InterPro:IPR000642); contains InterPro domain AAA+ ATPase, core; (InterPro:IPR00359 Range:  from: 2305375    to: 2309541    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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