Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->At4g35610                                                                  --------->MYB52(1)                                                               --------->ANAC58                                                               --------->ANAC58                                                               --------->ANAC46<-----------GT1                                                        <---------ARR11(3)   <---------ICU4          <---------YAB1               <---------ANAC46 --------->ARR14(2)   -------->HAHB4 --------->ZAT2                      --------->ZAT14    <---------ARR14(2)  --------->ICU4 --------->YAB1 -------------->AGL1           --------->GLK1(2)        <---------ARR11(1)  <---------YAB1<------ZmHOX2a(2) -->RAV1(2)         <---------ATHB12 <---------ZAT14   <---------CCA1(2)    <---------ATHB51 <-------   accagcatgggtatgaataccactgatgccaacattctgttcagtatataagtccccatatctgcaaacaacagcttaattattccatctcgatcatcat  2267900                                                                       --------------------->WRI1                                                                       <---------ANAC46                                                                  <---------ANAC58                                                              <---------SPL7                                                             <---------ANAC58                                                         <------MYB83  <---------ANAC58                                                         <---------ANAC58                                                         <---------ANAC58                                                        --------->MYB46(2)                                                   --------->ICU4 <---------ANAC58                                               <------ZmHOX2a(1)  <---------ANAC46                                           ------->GAMYB--------->MYB111(1)                                       <---------WRKY38(1)   <---------ANAC58                                       <---------WRKY12 --------->MYB59<---------ANAC58           <--                                      --------->WRKY18(1)<------MYB46(1)                 <---------DAG2      <---------At4g35610      <---------TOE2(3) ---------->DOF2--------->SPL7           <----------DOF2 --YAB1               --------->AHL20(2)  --------->MYB46(3)<-------TEIL             <------ZmHOX2a(2)   acagacttagctactacaatctcattaaaaactaaggctagtcaaccgaggaaaagattaggtgcgtaccgtgccttgagtctctcgatcacttttagtt  2268000                                                                                             --------                                                                                           <---------ZAT14                                                                                   --------->ANAC58                   --------->ANAC58                                                --------->ANAC46                   --------->ANAC58                                                --------->ANAC58                   --------->ANAC46         --------->ANAC46                      <---------LBD16               --------->ANAC58          -------->P                             <---------ZAT2               --------->AtLEC2      --------->ANAC46                           --------->ZAT2          --------->ANAC58           --------->YAB1  --------->ALFIN1         ------>ZmHOX2a(1)          --------->ANAC58<---------TOE2(3)------->GAMYB               ---------->DOF2 ------>NtERF2 ---------GT1  --------->ANAC58  --------->MYB46(3) <---------MYB52(1)--------->YAB1  <---------ARR14(2)   ttacaatttgtgaagccatgcaagcatcgaggttaacaaacacaacccgcttcccttggggctcagagacaatgaaagtcctagcacggagcctgaagtg  2268100                                                       --------->LBD16                                                     --------->ATERF1(1)                                                    <---------ZAT2                                                    --------->At4g35610                                                 --------->At4g35610                   --------->AHL20(2)                                                 --------->ZAT2                       <---------ATHB12                                                 <---------At4g35610      XXXXXXXXXXXXXXXXXXXX>MIR832-3P                                    --------->YAB1--------->MYB46(3)     <---------ANAC58                                   <---------ATHB12 --------->ZAT2<-----------HVH21 --------->WOX13(1) --->GT1                  --------->YAB1  <-----------GT1------>NtERF2   <---------ANAC58   aataccagatgctacttgctccatgttagcataacccatcatattaacatcagcagccgggccagtaatgtcatagcttcccaatccaatcaaatattca  2268200                     <---------MYB52(1)                     <-----------HVH21                <---------ALFIN1--------->DAG2                                                <------               --------->MYB46(3)                                                             -------              ------>ZmHOX2a(1)---------->DOF2                                           <---------ZAT6       <---------ZAT14   --------->At4g35610                 <------ZmHOX2a(1)  --------->At4g35610       --------->ZAT14   <---------At4g35610             --------->TOE1(2)     --------->GLK1(2)    <   gagtgagagtaaactcctccaccggtgagcagaaaaagcacagtcgaaatgtagaagaaactaggaaaacaagtgttccataatctgactagagatagct  2268300                                                                               --------->ATHB12                                                                            <---------GLK1(2)                                                                      <---------ZAT14                                                                      --------->ZAT14                                                                    --------->ANAC46 --------->YAB1                                                   --------->ANAC58 ---At4g35610               <----------DOF2                       --------->ANAC46      ----------->GT1 -->At4g35610       <---------ALFIN1                              --------->ANAC58    ---------->DOF2 ---------YAB1     --------->MYB46(3)       ----------->TBP      <-------TEIL------->TEIL       -----   ccatcatagtgaaatctctcaaccacttcgcattaccttctatgccataaaaacactgttactgacatacacaacactgaatctttgggaaagtaaaact  2268400                                                                                         <---------AHL20(2)                                                                                   ----------->GT1                                    ------->TEIL                                   <---------ZAT6                   <-----------GT1 <---------CCA1(2)                         --------->ANAC58     ----------->GT1    ------------>CBF                <-----------GT1      --------->ANAC58   <----     <---------ANAC55(2)<---------YAB1               <---------GLK1(2)     ---------->DOF2   -------- ------>GT1 <-----------GT1    <------------CBF------>ZmHOX2a(1)       ----------->HVH21 --------->AHL20(2)   gaaaattatgtaaattactagttactatcaatagattgtatctaatctcctaatagattctccgtccaaagacatgacaaagcaagtgtaaataaatata  2268500                        <---------YAB1                       <---------AHL20(2)                    <---------AHL20(1)                                          --------->YAB1                    --------->AHL20(1)                                         <---------ATHB12                  <---------TOE2(3)      <---------ICU4                      --------->WOX13(1)                --------->AHL20(2)     --------->GLK1(2)                   ------------>CBF                <---------AHL20(2)    --------->YAB1 --------->ARR11(3)<---------GLK1(2)   <---------------AtSPL8  <---------TOE2(3)  ----------->HVH21      --------->LBD16   --------->ZAT18 -------GT1    --------->AHL20(2)    <---------KAN4(1)<------ZmHOX2a(2)--------->ARR14(2) ->YAB1  ----------->RAV1(1)     --------->ICU4      <---------ARR11(3)<---------ARR14(2)      ------   actatagggtccaacaaattaatatttttatggaaatgaataatctttgtgacaagatcagtttgacattcccgattctcaatcagaagttcaccaaaaa  2268600              ------>MYB83              --------->MYB52(1)              ------>MYB46(1)             --------->ZAT14            --------->DEAR3(1)            <---------MYB46(2)           --------->ANAC58           --------->ANAC58           --------->ANAC46           --------->ANAC55(1)                 <-------TEIL                --------->GLK1(1)        --------->ZAT18                       <------ZmHOX2a(2)           <---------ARR14(2)        <---------ZAT14                      --------->AGP1               --------->ARR14(2)      <---------ZAT18                        --------->ARR11(3)         --------->LBD16      --------->At4g35610                    <---------ARR11(3)        <---------HSFB2a(2)      <---------At4g35610                   <---------GLK1(1)         <---------LBD16      --------->ZAT14                       --------->GLK1(1)       <---------ARR14(2)   --------->LBD16                     ---------->DOF2              --------->ARR14(2) ----------->RAV1(2)              --------->ANAC58                 --------->GLK1(1) <---------LBD16                  --------->ANAC58                 <---------GLK1(1)  <---------At4g35610 --->AHL20(2)<---------ZAT14      --------->ANAC46          --------->AHL20(2)        --------->At4g35610   attccctgagcacaccgaactgagaagactaatcacaggccaaaagagatccataaaaaaaaaaaaatgaaatccggaaattcagttcagctaatacatg  2268700                                                                               <------ZmHOX2a(2)                                                                              <---------ARR11(3)                                                                              --------->ARR11(3)              <------ZmHOX2a(1)                                           ---------->DOF2        --------->ATHB12                                              --------->RAP2.6(2)      --------------->AGL15                                           ----------->RAV1(1)     <------      <---------------AGL15                                          <----------ID1           -------     <-----------------AGL1                                        --------->ANAC46          <-------     <-----------------AG         <-----------GT1                  --------->ANAC58       --------->LBD16     <-----------------AGL3    ----------->GT1                     --------->ANAC58<----------DOF2    <<<<<<<<<TBF1       ---------->DOF2                          ---------->DOF2   <---------DAG2   tgattcttcttcattaggaaactgaataaagtttagtaactatatacttatatactaaaaacacctaaaaagccacaaaagatcacttttcccccatata  2268800  Previous    Next  AGI:  At1g07380.1    Description:  ceramidase family protein. similar to ceramidase family protein [Arabidopsis thaliana] (TAIR:AT5G58980.1); similar to ceramidase family protein [Arabidopsis thaliana] (TAIR:AT2G38010.2); similar to ceramidase family protein [Arabidopsis thaliana] (TAIR:AT2G38010.1); similar to neutral ceramidase [Triticum aestivum] (GB:ABX76295.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15765.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21530.1); contains InterPro domain Neutral/alkaline nonlysosomal ceramidase (InterPro:IPR006823) Range:  from: 2264827    to: 2268304    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version