Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                           ----------->GT1                                      <---------ARR14(2)                                      --------->ARR14(2)                                   --------->ANAC55(1)                             --------->AHL20(2)                           --------->TOE2(3)                           --------->TOE1(3)                           <-----------GT1                         <---------TOE2(3)                           <---------DAG2                <---------AHL20(2) --------->ANAC55(2)               <----------DOF2               --             <---------ARR11(3)    --------->ANAC58               <-----------GT1                  <-             <---------GLK1(2)     --------->ANAC58             --------->AHL20(2)     --------->DAG2         ---------->DOF2<-----------GT1 ----------->GT1         <---------AHL20(2)    ---------->DOF2 ---------YAB1<---------CCA1(1)    <---------ANAC55(2)    --------->ANAC58         --------->AHL20(2) ----->ICU4  --------->ARR11(3)    --------->ANAC46       --------->ANAC58<---------MYB59        <--- ----->GLK1(2)<---------RVE1(1)   <---------LBD16         --------->ANAC46--------->TOE2(3)<---------MYB46(3)   ttatgaatacaaaaagattttttttttaacattaaacacggattggaaaaacgagttaagacgcaattaaactttaccttactaaataaaaagtcgttgc  2237700                                    -------->P                                    ------>MYB83<-----------RAV1(2)                     <---------ALFIN1 --------------->AGL15    <-----------GT1            <---------O2<---------DAG2<---------DAG2        <---------AHL20(2)          <----------DOF2    <---------bZIP60(2) <----------DOF2<----------DOF2    --------->ICU4             <-----------GT1 ----------->HVH21--------->PCF2 <---------ANAC58         <---------YAB1          <---------ICU4 ------->At4g35610--------->ANAC58  ------>MYB46(1)    <---------MYB52(1)        --------->ICU4 --------At4g35610--------->ANAC58<---------MYB59     <-------GAMYB         --------->YAB1 --------RAV1(2)<------ZmHOX2a(1)<---------ANAC58    ----------->GT1        ----------->GT1   cagatgacatggacacgaggaccccactttatatggcctaccttttattgccaggctgttattattttccctctactattgtaatttttactttccattt  2237800                    <---------YAB1                 <---------MYB52(1)                            <---------ARR14(2)                <-------GAMYB--------->ALFIN1                  --------->ARR14(2)               ------>ZmHOX2a(2)                               --------->GLK1(2)              <------ZmHOX2a(2)                                --------->ARR11(3)             <---------ARR14(2)                                <---------ARR11(3)             --------->ARR11(3)                        ---------->DOF2          --------->LBD16             <---------ARR11(3)                     ------>ZmHOX2a(2)          --------->LBD16             --------->ARR14(2)                   <---------AGP1              <---------LBD16        <-----------HVH21---------->DOF2      <---------MYB52(1)             --------->MYB52(1)   tccaaaaatttgtcagatcgttacgattaaagtggctcatttagaaccgttggatctaaaagaaaaatctgcaaataactcccggttttctctcaactca  2237900                 <-----------HVH21                  --------->LBD16                --------->TGA1a                   <---------LBD16                --------->O2                 <---------ARR14(2)                    <---------AHL20(2)                --------->bZIP60(2)   ----------->HVH21                   <---------At4g35610             <------NtERF2           <-----------HVH21                <-----------HVH21          ----         <---------ANAC58         ----------->RAV1(2)  --------->ARR14(2) ----------->RAV1(2)  <-----         <---------ANAC58         <---------At4g35610<---------MYB52(1) <---------ALFIN1    <--------        <---------MYB46(3)  <---------ANAC58 --------->ARR14(2)      --------->TOE1(3)  <---------AHL20(2)  <---------------AGL15     <---------ANAC58<---------MYB52(1)       --------->TOE2(3) <---------AHL20(2)   ttttctgtaatgggtgccatgtcactaatttcgttcacctgttaccggtttctccggtattctcttgactaccttcacctgtgattttttttattttttt  2238000                       --------->AHL20(2)                     --------->ANAC55(2)         --------->AHL20(1)         --------->AHL20(2)                                <---------At4g35610         --------->ARR11(3)    --------->ARR11(3)          --------->At4g35610         <---------ARR11(3) --------->AHL20(2)             --------->ZAT2         <---------AHL20(1)<---------AHL20(2)              <---------ZAT2                     -------         <---------AHL20(2)--------->YAB1             --------->DAG2                     --------->KAN4(2)        --------->AHL20(2) --------->AHL20(2)       ---------->DOF2    <-------PIF5   *TSS   -------- ----->YAB1       ------>ZmHOX2a(1)       <----------DOF2  <------NtERF2             --------->YAB1 ------TBP    <-----------GT1  <---------ARR11(3) ----------->TBP      ------->PIF5 <---------ATHB12 -AHL20(2)<---------AHL20(2)<---------AHL20(2)----------->GT1     ------>NtERF2 --------->MYB46(3)   tataactaaaatatattttcctcacttaattaaaatcttcatcgcattttgtataaaaggcagctctctgcctcgtgctccatccactgattatcccgag  2238100                                       <---------LBD16                      --------->HSFC1(2)                      <---------HSFC1(2)                      <---------HSFB2a(1)                      --------->HSFB2a(1)                 --------->HSFB2a(2)  ----------->RAV1(2)                 <---------HSFB2a(2) --------->GLK1(2)                 --------->LBD16 --------->YAB1                                                  <---            <----------DOF2<---------HSFC1(1)                                         <---------GLK1(2) -->LBD16<-----------GT1   --------->HSFB2a(2)                   <---------YAB1      --------->At4g35610 ->LBD16<<<<<<<<<<GT-3b    <---------HSFB2a(2)     --------->MYB46(3)                <---------At4g35610   agagttttatttttctttccgagaaaattcgagaaaaataatctgggacaaaaaccatcgttcatttcttatagagtgagtctcttcagcttctcttctc  2238200                                                                                               <-----                                                                                            ---------                                                                                            <--------ATHB1                                                                                            -------->HAHB4                                                                        <---------MYB52(1) <---------YAB1                       <---------GLK1(1)                             ------>ZmHOX2a(2)     <---------ATHB12                      --------->ARR11(3)             XXXXXXXXXXXXXXXXXXXX>MIR870           --------->ICU4                  --------->YAB1                <---------ANAC58    <------ZmHOX2a(2)     <---------TOE2(3)    --------->ZAT14  --------->YAB1             <---------ANAC58   <---------ARR14(2)  <---------YAB1    <---------ZAT14 <---------YAB1          <---------ANAC58       --------->ARR14(2)----------->GT1 -------DOF2     --------->ICU4             <---------ANAC58  <-----------GT1        <---------MYB46(3)   tttcactgaagtttttgtatttatgatatcggtgtttcattgtttctcgtgcttattcagtttttctccgatccgttttttatgggattgttaatgattc  2238300              <---------ANAC58              <---------ANAC58              --------->ALFIN1    <---------MYB52(1)                                                                ---------->DOF2   <-----------HVH21                 <----------DOF2                        --------->ATHB12  <------   --------->LBD16                <-----------GT1                          <---------YAB1     <------ <---------LBD16      <---------AtLEC2                                  <----------DOF2       <------ --TEIL   <---------ANAC58    <---------AHL20(2)                   <-------TEIL      <------ZmHOX2a(1) >ATHB12  <---------ANAC58   --------->AHL20(2)<-------TEIL  --------->ANAC55(2)  <---------AtLEC2   attcccgtgagtgagtgtgtgtgtgcatggatttaataactttctccgattcatttttgactcacttgattcatcttttgatttgcaggaaagcttgagt  2238400                                                                 <---------MYB46(3)                --------->ANAC58                               <-------GAMYB                --------->ANAC55(1)                           --------->MYB52(2)       <---------RVE1(1)        <----------DOF2                                       <-----------RAV1(1)      <---------CCA1(1)   ---------->DOF2                                            <---------MYB46(3)      --------->ARR11(3) ---ANAC58      --------->ANAC46                       <---------GLK1(2)------>NtERF2 <---------ARR11(3) ---ANAC58      --------->ANAC58 <----------DOF2       --------->ARR14(2)             <---------ARR14(2) ---ANAC46   <---------REM1(2)   <---------DAG2        <---------ARR14(2)  ----------->RAV1(1)   gagggaaaagctttctacacgaaactagtctccagctttttgctctgtatttgtccagatttgtttgttgttgaggccaacatttgaagatattttcaag  2238500                                             <------NtERF2                                            <---------MYB46(3)                                         <---------ANAC58                               ------>MYB46(1)                                                     --                               ------>MYB83--------->ALFIN1                                        --                             --------->AtMYB61       ------>ZmHOX2a(1)                            ---                     --------->ANAC58    <---------ANAC58            ------>ZmHOX2a(1)            ---                     --------->ANAC58   <---------MYB46(3)     <---------ICU4             --------->ZAT2         ---------->DOF2  <---------ALFIN1 <---------DEAR3(1) <---------YAB1<----------DOF2     -----   aaaatgggagtgaaagtagcaacaagctccaccttccatcaatgggtggctcatcctatagttcatcattcctcttccctttctcaaaccctagcttcct  2238600  Previous    Next  AGI:  At1g07280.1    Description:  binding. similar to binding [Arabidopsis thaliana] (TAIR:AT2G29670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21490.1); contains InterPro domain Tetratricopeptide-like helical; (InterPro:IPR011990); contains InterPro domain Tetratricopeptide region (InterPro:IPR013026) Range:  from: 2238086    to: 2241216    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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