Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                <------MYB83 <------ZmHOX2a(1)                                                                              <------MYB46(1)                                             --------->TOE2(2)               <---------TOE2(2)                                             --------->TOE1(2)              <---------MYB52(1) <-----                                     <---------YAB1                       <---------O2  --------->HSFB2a(2)                            --------->YAB1  --------->YAB1             ===========================HOX2a_HOX2a                            <---------ICU4 <---------YAB1              <------ZmHOX2a(2)<---------HSFB2a(2)                           <---------YAB1  <---------TOE2(3)     --------->MYB52(1)  --------->ZAT6                         --------->YAB1 <---------WOX13(1)   --------->GLK1(2)<---------MYB46(3)   ctcttcatctatagactgatatatatatcatcatcacatatgattaacataagacaattgaagaatctaatggatcacgttggtttacctctaggactcc  2232500                                                                                ------>ZmHOX2a(1)                                                                      --------->HSFB2a(2)                                                                 --------->HSFB2a(1)                                                                 <---------HSFC1(2)                                                                 --------->HSFC1(2)                                                                 <---------HSFB2a(1)                                             --------->ARR11(3) --------->ARR11(3)                                             <---------ARR11(3) --------->GLK1(2)                     --------->YAB1         <---------GLK1(1)   --------->ARR14(2)       <---------ANAC58                     --------->GLK1(1)   <---------ARR14(2)             ------       <---------ANAC58                     <---------CCA1(2)  <---------GLK1(2)--------->AtLEC2   <- ----ZAT14        --------->WOX13(1) <-----------GT1<---------GLK1(2) <---------HSFB2a(2)      ------   acttagatttagtgcctaaacaatcagacacagccaaattcactggatatctcagaatttcattagaatcttccacaacttcctgcaaacaaataacatc  2232600                                                                                         --------->ARR14(2)                                                                                      --------->LBD16                                                                                     <---------ANAC55(2)         <---------ANAC55(2)                                                         <---------ANAC46         --------->ANAC55(2)                                                         <---------LBD16   <---------WOX13(1)                                                               <---------------- <------ZmHOX2a(1)                                                                --------->GLK1(2) ----->RAV1(2)                                                          <----------DOF2  <---------ARR14(2) --------TOE2(3)                     ------>ZmHOX2a(2)                 <---------DAG2--------->ANAC55(2) --->At4g35610          ---------->DOF2                 ------->TEIL<-----------GT1 <---------LBD16 -   tgaggattgatacttattcgtttccctaaagaaacttgatcccacaattgaacttatgcacatcaacaatttaccttttctgacattccgggattgggaa  2232700                                                           <---------At4g35610                                                           ------>NtERF2                                                           --------->At4g35610                                                          --------->DEAR3(1)                                                          --------->RAP2.3(2)              --------->ARR14(2)                                                         --------->RAP2.3(1)               <---------ARR14(2)                                                        --------->ABI4(1)                  <---------GLK1(2)                                                        ------>NtERF2                    --------->LBD16                                                       --------->DEAR3(1)              <---------At4g35610                                                       --------->ANAC46                --------->At4g35610                                                      --------->DEAR3(2)               --------->LBD16                --------->GLK1(1) ----------->ARR10  <---------ATERF1(1)     <----------DOF2         <---------At4g35610     <------NtERF2      <---------ALFIN1   ------>ZmHOX2a(2)--------->ANAC46         --------->At4g35610   <---------ANAC46  --------->ANAC46     <------ZmHOX2a(2)<---------LBD16 -AGL1 <--------P           <---------DEAR3(1)--------->MYB52(1)<---------ARR14(2)    <---------ANAC46 -------->ARR11(3)     <---------ARR11(3)    <-----------GT1    --------->ARR14(2)   <---------LBD16<   cagaacttggtagatgagatttcaatttcttcggcgtagagactgaattaccagacaccgccgctgaatccgatctcatctttctcttccgcggaatctc  2232800                                                                                        <------MYB83                                                                                        <------MYB46(1)                                                                                        -------------                                                                                      <--------P                                                                                    <------MYB46(1)                                                                                    <------MYB83                                                                                    <---------MYB46(3)          <-------TEIL                                                              --------->MYB55(2)        <---------ARR14(2)              <---------MYB52(1)                         <---------AtMYB61        --------->ARR14(2)        <---------SPL7                                 <-------GAMYB       --------->At4g35610     <-----------HVH21                                <---------DEAR3(1)    <------NtERF2             --------->DEAR3(1)                                <---------ANAC46    <---------At4g35610     <---------At5g28300                <----------ID1  <------NtERF2  --------->ANAC46         <-----------GT1            <---------ANAC58        ------>NtERF2  <---------RAP2.6(2)   --------->GLK1(1)             <---------ANAC58        --------->LBD16       - <---------LBD16        <---------GLK1(1)      --------->REM1(1)            <---------LBD16       <-- -----------RAV1(1)<---------LBD16<---------DEAR3(2)<---------YAB1       <-----------HVH21  <------NtERF2   atatgcggcagattcaaggctctcggatttcaccgtcgttccgatggctacaatatgcttgtaagaagacaaacttgtcccggcgttggtaggcatcgtt  2232900              <---------GLK1(1)          --------->ANAC58         <---------At4g35610          --------->ANAC58         --------->At4g35610       --------->WOX13(1)      --------->ANAC58      >>>>>>>>>CBP60g                <---------ATHB12      --------->ANAC58      >>>>>>>>>SARD1         <---------ANAC58  <-----------HVH21    --------->ANAC58            <---------ANAC58 <------MYB46(1)    --------->ARR14(2)      -------->P <---------ANAC58 <------MYB83 --------->GLK1(1)    <------NtERF2  --------->ZAT2 ---------->TaNAC69(2) --------->ANAC58    <-----------GT1 ------------>CBF               <------ZmHOX2a(1) -------->MYB59     <---------ARR14(2)<------ZmHOX2a(1)<---------ANAC58          --------------->AGL15 -------MYB52(1)XXXXXXXXXXXXXXXXXXXXX>MIR2933A/B--------->LBD16                  <----------DOF2 ----   gttaggtcacacaaggaaatcggaaacgaaatttggcagaggaatttacccgtgcttgcgaatcaatctcttggtcgatactactttgtgtaggagcgag  2233000                                                                                    ------>MYB83                                                            ---------->ID1        <---------MYB111(1)                                                     --------->LBD16              --------->AtMYB61                                                     ------>NtERF2 <---------At4g35610                           <---------ANAC55(2)      --------->ANAC58              <---------MYB59                     --------->LBD16                --------->ANAC46              <---------MYB46(2)                    <---------ANAC58                --------->ANAC58            ------->TEIL                    <---------ANAC46               <---------LBD16 --------->At4g35610           <---------YAB1  ----------->GT1   <---------ANAC58   <---------At4g35610 ------>MYB46(1)  --------->CCA1(2) <---------ANAC58         <---------ANAC58   ----------->RAV1(2) -------->P ------>DOF2       <---------LBD16   ----------->RAV1(1)<----------DOF2   <----------DOF2           -   aaagagatgaaatttgatagtagcgggaaacgtgaatcgcgacattttcgtctcccgcctttgttcttctgatgcccttttgaacctacccagtttcgac  2233100             <---------RAP2.6(3)             <------NtERF2           ----------------->AGL1                                                        --------->CCA1(2)     <------------CBF                                                                    <------ZmHOX2a(2)    --------->ATHB12                                 <---------DAG2                     <---------ARR14(2)   <---------AHL20(2)        ------------>CBF        <----------DOF2                    --------->ARR14(2)   <---------YAB1  <---------ANAC46     --------->ANAC46                                <---------ARR11(3) <---------ICU4  ----------->GT1 <---------ATHB12   <---------ANAC58                    --------->AGP1 -------->ICU4 <------------CBF <------------CBF    <---------ANAC58                    --------->ARR11(3)   taatttttattgggccgaattgtgtaaatgggccaattgttcacgctgaaatttgctttttgtttttgtttttgtgagagttggatttaagatccaaata  2233200                                                           ------------------------>ANAC81                                                    --------->TGA1a                                                    <---------TGA1a                                                    <---------O2                                                    <---------bZIP60(1)                 =============                                                    --------->bZIP60(1)                 --------->O2                                                    --------->ANAC55(2)                 <---------ANAC46                                                    --------->O2                        <---------TGA1a          <---------AHL20(2)                 =================bZIP_DOF                  --------->TGA1a      --------->AHL20(2)                     --------->AHL20(2)                  ---------->DOF2      <---------AHL20(2)            <---------WOX13(1)----------->HVH21          =================bZIP_DOF      <---------YAB1              <---------AHL20(2)==============================bZIP_DOF     --------->AHL20(2)           --------->ATHB12  ==============================bZIP_DOF      -----     <---------AHL20(1)          <---------AHL20(2) <---------bZIP60(2)---------->DOF2  <---------O2     <---------AHL20(2)          --------->AHL20(2) <---------ANAC55(2)===========================bZIP_DOF     --------->AHL20(1)<---------AHL20(2)    ---------->DOF2 --------->AtMYB61   --------->AHL20(2)   ctagtaatataatttatagttttgtttatttgatattaattgaacaataaaacgacgtgacgaccaaaaaaaaaaaagaacaataaaacgacgtgaagaa  2233300                    --------->ETT(2)                                           <---------AHL20(2)            ---------->DOF2              <----------DOF2              --------->At4g35610    --------->MYB52(1)              <----------DOF2                   <------NtERF2<-----------GT1 ======================bZIP_DOF     <---------DAG2 <---------AHL20(2) <---------At4g35610    ------->TEIL ---->GLK1(2)    --------->ZAT18<---------WRKY12  --------->AHL20(2)--------->ZAT18--------->YAB1   tcagacaaacgactcaaagtggtctacctcttcgtcaacttttctttgggcataaaattgtccatataagtccgctgatattatatcacaatatgcacca  2233400  Previous    Next  AGI:  At1g07270.1    Description:  cell division control protein CDC6b, putative (CDC6b). similar to CDC6 [Arabidopsis thaliana] (TAIR:AT2G29680.1); similar to CDC6 [Arabidopsis thaliana] (TAIR:AT2G29680.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO21489.1); contains InterPro domain Cell division control, Cdc6 (InterPro:IPR016314); contains InterPro domain CDC6, C terminal (InterPro:IPR015163) Range:  from: 2229756    to: 2232896    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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