Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                 --------->ARR14(2)                         --------->MYB52(1)                         ------>MYB46(1)                  --------->ANAC58     --------->ANAC55(2)                  --------->ANAC46     <---------ANAC55(1)                  --------->ANAC58     <---------ANAC55(2)               <---------ZAT14 <---------GLK1(2)               <---------REM1(2)       <---------ANAC58            ------>MYB83 ------>MYB83  <---------ANAC46         --------->DEAR3(2)    <---------ARR14(2)       --------->MYB52(1)--------->ARR14(2)       ------>MYB83      <---------ARR14(2)                     <---------ANAC58       ------>MYB46(1) <---------MYB59 <---------ANAC58         <---------ANAC58         <---------ANAC58     <---------MYB59 ------->TEIL  <----------DOF2      <---------ZAT14                  <---------ANAC58     --------->AtMYB61--------->DEAR3(2)               --------->ALFIN1    --------->MYB52(1)  ------ ->AHL20(2) ------>MYB46(1)  --------->LBD16         <---------ANAC46      ---------->DOF2     <-----   tcgataaccaaaccgactacacgaaccgaaccggattctttacgtgaagaaactagagtggagagagcgtctctgactaaaggaactgttttcttggtgg  2228900                         ---------->DOF2                      <----------DOF2                               ------->GAMYB                    --------->At4g35610                            --------->ANAC46                <---------HSFB2a(2)                                --------->ANAC58                --------->HSFB2a(2)                                --------->ANAC58           -------               <---------LBD16                <---------ANAC46  <---------WRKY38(1)           -------              <---------LBD16              --------->ALFIN1   --------->ANAC46  --------->ARR14(2) --->ZAT18 --------->HSFC1(2)           <---------ATHB12      --------->ANAC58  <---------ARR14(2) ----ZAT18 <---------HSFC1(2)    --------->GLK1(1)            --------->ANAC58  <---------GLK1(2)   actcaagaatataagcttcgggagctttaaagaagagttccaatggtggagggttttgaacatcaggcaacgcaaggagacggattcgaggctgtgaagc  2229000                                                                   --------->ALFIN1                                                                 <---------ANAC58                                                                 --------->ALFIN1                        <----------DOF2                          <---------ANAC58                       <---------ANAC58                          <---------ANAC46                       <---------ANAC58                       <---------AtMYB61   <---------ANAC55(2)                   --------->ALFIN1                      <------MYB46(1)     --------->YAB1                --------->DAG2          ---------->DOF2  <------MYB83        <---------ICU4 -->ANAC58     --------->DAG2        ----------->GT1  <------ZmHOX2a(1)     <------ZmHOX2a(2) -->ANAC58    ---------->DOF2<------ZmHOX2a(1)        =============================HOX2a_HOX2a   aacgagggacttagcgaaaaggtgggcttgaggagcgagaggtaaagcccagtagaggatggtgatggtgtggatgcgatcatcacgtttgatgagagat  2229100                                                                       --------->YAB1                                                                    <----------DOF2                                                       <---------GLK1(1)                                            --------->MYB52(1)    <---------At4g35610                                         --------->ANAC55(2)   <---------At4g35610                                      <---------ARR14(2)    <------------------------ANAC81                                      --------->ARR14(2)------>ZmHOX2a(2)                              --------->LBD16         <---------ARR11(3)             <----------ID1 <-----------RAV1(2)       --------->ARR11(3)    <---------ARR14(2)--------->At4g35610<---------ANAC55(2)<---------At4g35610     <----------DOF2   ttagcgaattcaatggagacaagaagatgaccaggggatggatatgtaacgaagatgatctctgcttctgctttcatcgtcttcttctttcttctctctc  2229200                                                                                    <---------ZAT14                                                                                    --------->ZAT18                                                                                   --------->ANAC58                                                                                   --------->ANAC58                                                                                 >>>>>>>>>>AtWER                                                                               --------->ANAC58                                                                        <----------DOF2                   <----------DOF2               <---------AHL20(2)    <---------ANAC58         -----                  --------->TOE2(3)              --------->AHL20(2)    <---------ANAC58    --------->CCA1(2)     <---------ANAC46                   --------->YAB1   <---------ATHB12      --------->ANAC58 <----   tattcttgtgtttaatgcttcctttattgtttttgggctctatattgatatttaaacaaatgaatgagggatggctttactacgcatgcactgatacacg  2229300               <---------SPL7              <---------MYB46(3)            <------NtERF2           <---------DEAR3(2)           ------>NtERF2          <---------DEAR3(1)         --------->ATERF1(1)         <------NtERF2         <---------MYB52(1)        ------>NtERF2        <---------SPL7       --------->ATERF1(2)       <---------ATERF1(2)       --------->RAP2.3(3)       --------->DEAR3(1)      <------NtERF2      --------->ATERF1(1)      --------->DEAR4(2)      --------->RAP2.3(1)      --------->ERF1      --------->RRTF1(1)     ------>NtERF2     <---------ATERF1(1)    --------->ANAC46    --------->DEAR3(1)    --------->RAP2.3(2)                         --------->ATHB51    --------->RAP2.6(2)                         --------->AHL20(2)                         <---------TOE2(3)   --------->ERF1 *TSS                          <--------ATHB1                 --------->ANAC58   --------->ATERF1(1)                          <---------AHL20(2)             --------->ANAC58   --------->MYB46(3)           <-----------GT1 <---------ICU4                 --------->ANAC46  <---------At4g35610       --------->AHL20(2) <---------ATHB51              <-----------GT1  --------->At4g35610 --------->YAB1       ------------>CBF           <-----------GT1     <---------DOF5.7(2) -->MYC3<---------ATERF1(1) <---------AHL20(2) <---------ATHB12      --------->ZAT18    --------->DOF5.7(2) ---MYC3<-----------HVH21  --------->AHL20(2)  --------->ICU4        <---------ZAT14   <----------DOF2   ttttagccgccgtcggccgttccatcatatttaattacacattttgccaataatttgtttagactctcgagtttactatttacgctattctttaacgaag  2229400                                                                 ---------->DOF2                                                            <---------HSFB2a(2)                                                      <---------DAG2                                                      --------------->AGL15                 ------>MYB46(1)                          <-------TEIL            --------->MYB46(3)                        -------->P              ---------->DOF2   --------->ANAC58 -------->P <---------------AGL15      <-----------GT1     --------->YAB1    <------MYB83        --------->DAG2   --------------->AGL15    <----------DOF2    <---------YAB1     <------MYB46(1)    ---------->DOF2   --------->HSFB2a(2)      <---------DAG2    ----------->GT1   --------->MYB59 <----------ID1  <----------DOF2           ------>MYB83------>MYB83   <---------------------WRI1   --------->ANAC58--------->MYB52(1)       XXXXXXXXXXXXXXXXXXXX>MIR4240  --------->YAB1   --------->CCA1(2) ----------->GT1  <---------------AGL15     ------>MYB46(1) <----   tgtatgatgataaaaccaaagagataggtccagcacgagagggaaaaagctaaccacttttactggaaaaagaaactaaacccactactttaccaactct  2229500                   --------->ANAC58                   --------->ANAC58                   --------->ANAC46                   <---------ALFIN1              <---------ZAT18     ----------->GT1            <---------At4g35610  ----------->GT1                                             <-------            <---------ZAT2    --------->LBD16              <---------ANAC58                  --------            --------->ZAT2   <-----------RAV1(2)           <---------ANAC58                 ---------      <-----------HVH21      <---------LBD16         <---------AHL20(2)                <---------YAB1     <----------DOF2      ------>ZmHOX2a(1)          <---------AHL20(1)              --------->YAB1 ------DOF2 --------->At4g35610--------->LBD16       --------->ARR11(3) <-------TEIL--------->ICU4  -   tttcagtctttcacagctcacacacatcctcccaggggataaaaatgtatactaatatatggcgagaccctacatacatatgctaaatgatgaatgggaa  2229600                ------>MYB83              --------------->AGL15              <---------------AGL15                             <---------ALFIN1              <---------MYB59                               <-----------TCP11(1)              --------->TOE2(3)--------->ZAT6          <---------WOX13(1)             <-----------------AG                    <---------AHL20(2)             <-----------------AGL1                 <---------AHL20(2)             --------->ANAC55(2)                  --------->TOE2(3)      --------->YAB1        <---------ICU4        --------->YAB1----------->RAV1(1)     <---------YAB1 --------->MYB59             --------->AHL20(1) ---ID1      <---------ANAC55(2)               --------->YAB1--------->PCF2 --->GT1     ----------------->AGL1   ------->GAMYB --------->AHL20(2)   <-----------GT1 -->GT1      ----------------->AG  --------->MYB52(1)--------->ATHB12   <---------ZAT14 ---------->GT1 ------>MYB46(1)<-----------GT1 --------->AHL20(2)       --------->ZAT14   aaatgttattagaatacctaattaggctaattttcactaactgtccgaataatattaattgatggcccacatagtttactatctatggtcttacaactta  2229700                                                                                 --------->GLK1(1)                                                                                ------->TEIL                                                                     --------->LBD16                                                                    <---------ANAC46                                                                    <---------HSFB2a(2)                                                                    <---------ANAC58                                                                    <---------ANAC58           <-----                                                                    <---------ANAC55(2)     <--------                                                                   <---------LBD16        --------->ATHB12                                                                <-------GAMYB   --------->ARR14(2)                                                                <---------At4g35610      <---------YAB1                                                                --------->At4g35610   ------>ZmHOX2a(1)                                                            ------------>AtMYB77<-----------ARR10                                                           <---------ETT(2)     <---------ARR14(2)                                                           --------->ETT(2)     <---------ARR11(1)                                  --------->ICU4           --------->ZAT14     <---------CCA1(2)                  <---------ARR11(3)                       <---------ZAT14     <---------ARR14(1)            <-----------GT1<----------DOF2             --------->ZAT6----------->GT1----------->RAV1(2)   gttggccattgttttcaccagatgttttcctttgtaagaatggagtttttttttctcacagtagacagttgcggaaaaatcgtatctcctgttgattgat  2229800  Previous    Next  AGI:  At1g07260.1    Description:  UDP-glucoronosyl/UDP-glucosyl transferase family protein. similar to UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis thaliana] (TAIR:AT2G29740.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76057.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21482.1); contains InterPro domain UDP-glucuronosyl/UDP-glucosyltransferase; (InterPro:IPR002213) Range:  from: 2227593    to: 2229318    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g07270.1    Description:  cell division control protein CDC6b, putative (CDC6b). similar to CDC6 [Arabidopsis thaliana] (TAIR:AT2G29680.1); similar to CDC6 [Arabidopsis thaliana] (TAIR:AT2G29680.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO21489.1); contains InterPro domain Cell division control, Cdc6 (InterPro:IPR016314); contains InterPro domain CDC6, C terminal (InterPro:IPR015163) Range:  from: 2229756    to: 2232896    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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