Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->ANAC58                                                       --------->ANAC58                                                       --------->ANAC46                      <-----------------------TaNAC69(2)        <-------GAMYB--------->CCA1(2)         --------->At4g35610  --------->ANAC58       <---------MYB46(3)                      <---------At4g35610  --------->ANAC46       --------->MYB52(2)                      <-------GAMYB<---------At4g35610       <-----------RAV1(1)                    --------->MYB52(2)    --------->ANAC58        ---------     <---------MYB52(1)                    <-----------HVH21--------->At4g35610         --------->TOE2(3) --------WRKY12 ---------->DOF2            <---------MYB52(1) ------->GAMYB    <---------ANAC58 --------WRKY38(1)  <----------ID1     --------->MYB52(1)  ----------->RAV1(1) <---------ANAC58 ----ZAT6   <---------HSFB2a(2)      <---------ZAT14 --------->MYB52(1)        <---------ANAC46  <---   ttcaacggtttgttgcagaaaagagacgaagacggagagaacaccggtgagttgcaaacggcaactgaagacgacatcgtttcgtagaaaacttaaaagt  2199700                       <---------MYB46(3)                      <---------WOX13(1)                     >>>>>>>>>ARR2           --------->ATHB12                                                                  <-------          <---------YAB1                                                                  --------->AHL20(1)          --------->ICU4                       *TSS           <---------WRKY12            <---------ARR11(3) <----------DOF2   <---------YAB1 <---------HSFC1(1)        <-----------HVH21      <---------ANAC58 <---------DAG2--------->ATHB12   <---------HSFB2a(2)      <---------ZAT6          <---------ANAC46 ->DOF2 <---------At4g35610       --------->HSFC1(1)   --------->ZAT14             <---------ANAC58 --------GT1 <---------WOX13(1)   --------->HSFB2a(2)  <---------ZAT14      ---------->DOF2 ---------   ttcctttttctgatgattgatttgattgttagtcttctagacgtttgtgtttctctgtttagtgtcaacgagagagaagaaagaggcttgaatatataat  2199800                                             <<<<<<<<<TBF1          <-----------GT1                                        <---------ANAC46    --------->WRKY18(1)                                        <---------ANAC58   <-----------HVH21                                        <---------ANAC58 --------->LBD16                                     <---------MYB52(1) --------->HSFB2a(2)                  <-------  --------->ARR11(3)                <-------GAMYB  <<<<<<<<<TBF1   --------->DOF5.7(2)       <------- --AHL20(2)                  <-----------RAV1(1)<<<<<<<<<TBF1<---------WRKY12          <----------DOF2 >AHL20(2)     <----------DOF2     <---------MYB46(3)   <---------HSFB2a(2)      <----------DOF2   ataagacctggacaagtctttctctgtttctctgtggccgttgcttcttcttcttcttccaggtcaaacgttaccactctcatctttctctttgactttt  2199900               ------>NtERF2               --------->ABI4(1)              --------->RAP2.6(2)              --------->DREB2C(2)              --------->ANAC58              --------->DEAR4(1)              --------->ANAC46              ------->GAMYB              --------->ANAC58              --------->DEAR3(1)             --------->MYB46(3)            <---------At5g28300          --------->MYB46(3)         <<<<<<<<<GATA-4                                     <---------HSFB2a(2)         <<<<<<<<<GATA-2                                     <---------HSFC1(1)         <<<<<<<<<GATA-3                                     --------->HSFB2a(2)    ----------->GT1         <<<<<<<<<GATA-1                         <---------At4g35610               ----------->GT1     <---------YAB1                              --------->At4g35610 <---------AHL20(2)   <---------ICU4----------->RAV1(1)             <---------ZAT2     <---------AHL20(2)    --------->DAG2   --------->YAB1<---------ALFIN1         <----------DOF2    --------->HSFC1(1)--------->HSFB2a(2)  <---------ATHB12 <---------ALFIN1 <----------DOF2         <---------LBD16 <----------DOF2---------- --DAG2 ------->TEIL                <---------DAG2 ------->GAMYB    --------->AHL20(2)   ---------->DOF2 ---DOF2--------->ARR14(2)    <-----------GT1<-----------HVH21--------->LBD16  <---------HSFB2a(2) --   tcaaatcatgaatccaccgccacagtccattttttctgctttttctttgtcaactgcgattttccagaaattaaatgactttgggaagataaaaagtcaa  2200000                                                                                                 <---                                                                                                -----                                                                                              -------             ---------->DOF2                                                                  <------     <------NtERF2                                                                            <------     <---------RAP2.6(3)                                                                      -------    --------->RAP2.6(2)                                                                       <------   <-----------------AG <---------ALFIN1                                                      -------   ----------------->AGL1                         ---------->DOF2                            <-------   <-----------------AGL1                        <------ZmHOX2a(1)                      ------>MYB46(1) <----------ID1--------->ANAC58      ---------->DOF2    <----------DOF2                 ------>MYB83 ->GT1      <------ZmHOX2a(1)     <---------AHL20(2)--------->ANAC58                    -------->P -------->DOF2 --------->ANAC58   --------->AHL20(2)--------->ANAC58                  <---------MYB59   ataaggccgaaataggaaagaaatcaacacctaaaattaaaaagcccatcaggaaagcctttaatgagatagcccatattaagtcggacctacatggatc  2200100                                                                <------ZmHOX2a(2)                                                               --------->ARR11(3)                                                              <---------GLK1(1)                                                              --------->GLK1(1)                                                        <---------ANAC46                                                       <---------ZAT2                                                       --------->ZAT2                                                       <------NtERF2                                                       --------->ATERF1(1)                                                      <---------ERF1                                                      <---------RAP2.3(1)                                                      <---------DEAR4(2)                                                      <---------MYB46(3)                                                      <---------RRTF1(1)                                                      <---------DEAR3(2)                                                      ------>NtERF2                                                      <---------ATERF1(1)         --------->ARR14(2)                           <---------RAP2.6(1)       ----------->HVH21                             <---------DEAR3(1)   <---------GLK1(1)                                 <---------RAP2.6(2) -------DOF2                                         <---------RAP2.3(3) ->ZmHOX2a(2)                                        <---------ATERF1(2) -->ARR11(3)                                        <---------LBD16 ---ARR14(2)                                      <---------DEAR3(1) ---AGP1 <---------ARR14(2)                       ------>ZmHOX2a(2) >TEIL --------->ANAC46                          <------ZmHOX2a(2) ---ARR11(3)                                    <---------ARR14(2)                  <---------ALFIN1 -->ARR14(2) --------->LBD16        <---------CCA1(2)<---------RAP2.3(2)       --------->ZAT14 --CCA1(2) <---------LBD16       *TSS           --------->ARR14(2)      ------>ZmHOX2a(2)        <<<<   tttagaaacccgacccgggtcgttttatttgcagagccatctcttgttcggatcggcggctcggagatcagggatcgctagttcagacaccttctcttct  2200200                                                                                                   --                                                                                                  <--                                                                                                  <--                                                                                                  ---                                 <-----------GT1                                                  <--                              <---------AHL20(1)                                                  <--                              --------->ARR11(3)                                                  <--                              <---------ARR11(3)                --------->ANAC55(2)          <-------                  --------->MYB52(2)   <-----------RAV1(1)      <---------ANAC58         <---------HSFB2a(1)                <---------MYB52(1)   <----------DOF2            <---------ANAC58         <---------HSFC1(2)                <--------P    --------->AHL20(1)     <----------DOF2 <---------WOX13(1)  --------->HSFB2a(1)         ------>ZmHOX2a(1) --------->YAB1---------->ID1   <---------WOX13(1)<-----------GT1  <------- <<<<<TBF1   <---------TOE2(3)<---------ICU4      <-----------GT1 ----------->HVH21      --------->HSFC1(2)   tcttcgttctccttcgaggttagtttcgataatattttcctttgttgttttttaactttgatttatgcgtgatagatgttactgattcagaaatttcgtt  2200300                                                           --------->At4g35610                                                           --------->ABI4(1)                                                           <---------At4g35610                                                           ------>NtERF2                                                          <---------ATERF1(1)                                                          --------->RAP2.3(2)                                                          --------->DEAR3(1)                                                          <---------ALFIN1                                                         <------NtERF2                                                         --------->ATERF1(1)                                                         --------->RAP2.3(1) ------->LBD16                                           --------->DEAR4(2) -------ANAC55(2)                                        --------->ORA47(2) -------ANAC55(1)                                       <---------RRTF1(1) ------>ANAC55(2)                                       <---------RAP2.3(1) -------ANAC46                                          ------>NtERF2 -------ANAC58                                --------->KAN4(2) -------ANAC58                  <---------ANAC58       <---------RAP2.3(2)        <----------DOF2 --ANAC58                       <---------ANAC58  <----------DOF2<---------MYB52(1) --ANAC58        --------->GLK1(1) --------->WRKY38(1) --------->ANAC46         --------->At4g35610   ccgtgttcatgtttctctgaattcttagggtttagcgttgtctatgcttattcttttgcgccgctccgttttgggctcgaacagctttctcttgtttatc  2200400                                               <---------ZAT18                                          <---------ANAC58                                          <---------ANAC58                                          <---------ANAC46 <---------ZAT14                                  <---------ANAC58         <---------ZAT18                                  <---------ANAC58 <---------DAG2                    <---------MYB46(3) <---------MYB52(1)  --------->ZAT14<---------At5g28300   <----          <---------At4g35610<-----------RAV1(1)   <----------DOF2       <-----------GT1--------->ATHB12   tgtgttcgattcagcgaattgatggtttccattgttgcttcgtttcttgttcacttttcagtgaacttcaagaatttaccgtcgttccattgatttagct  2200500                                                             <------MYB83                                                             <------MYB46(1)                                  ----------->GT1       ----------->HVH21                               --------->ARR14(2)    ------>NtERF2                          <---------ANAC58        <---------At4g35610                          <---------ANAC46        --------->ZAT2                          <---------ANAC58        --------->At4g35610                     <---------At4g35610      <---------ARR14(2)               <---------At4g35610            ---------->DOF2    <---------ARR14(2)<-----------RAV1(1)<-------GAMYB      --------->CCA1(2)  --------->ATHB12     --------->ARR14(2)   <---------MYB46(3) -----------AGL15    --------->At4g35610      --------->MYB52(1)   --------->MYB52(2)   agaattggatatagaaaagtttcagcttgagtggaactgtaagtagaataactgctgcctgataggtgtttgttgaaatgcctctgagaaacaaaaattg  2200600  Previous    Next  AGI:  At1g07160.1    Description:  protein phosphatase 2C, putative / PP2C, putative. similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT2G30020.1); similar to protein phosphatase 2C [Medicago sativa] (GB:CAA72341.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR015655); contains InterPro domain Protein phosphatase 2C, N-terminal (InterPro:IPR014045); contains InterPro domain Protein phosphatase 2C, manganese/magnesium aspartate binding site; (InterPro:IPR000222) Range:  from: 2197907    to: 2199747    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g07170.1    Description:  Identical to Uncharacterized protein At1g07170/At2g30000 [Arabidopsis Thaliana] (GB:O80873); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G30000.1); similar to Os04g0663300 [Oryza sativa (japonica cultivar-group)] (GB:NP_001054163.1); similar to unknown [Picea sitchensis] (GB:ABK20981.1); contains InterPro domain PHF5-like (InterPro:IPR005345) Range:  from: 2200133    to: 2201145    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version