Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     <---------ICU4                      --------->GLK1(2)                   --------->ATHB12                   <---------GLK1(2) <---------HSFB2a(2)                            --------->LBD16 --------->HSFB2a(2)      -------->P        --------->ARR14(2) --MYB59          <-------TEIL              --------->GLK1(2)               <---------ATHB12 >CCA1(2)    <-----------GT1                <---------ARR14(2)    ------->TEIL                    >>>   cttccaaaaacgatttcacattcattgcaaccagagacaactcgagaatccgaagagattcttcatcgaacctgcacaatcagtgagaagaaaccctgtt  2168200                                   <---------LBD16          <---------ANAC58                                --------->HSFC1(2)          <---------ANAC58                                <---------HSFB2a(1)         <---------ANAC46        --------->ANAC46        <---------HSFC1(2)  --------->HSFC1(2)        --------->ANAC58      <---------GLK1(2)     <---------HSFB2a(1)        --------->ANAC58     <---------At4g35610    <---------HSFC1(2)           --------->CCA1(2)    <---------ALFIN1         --------->At4g35610    --------->HSFB2a(1)     ---------->DOF2  ----------->RAV1(1)      <-----------RAV1(2)     ------->TEIL          --------->YAB1            <- >>>>ZML2                --------->GLK1(2)        <---------ARR14(2)   <---------WOX13(1)      ------   ctagccacacacacaagagaaattgagaatcagatgcttcggatggattgaagaaccttctgtcttggacccgattgataaagagataagtctgatcagc  2168300      --------->GLK1(2)      <-----------ARR10                                                                    ------->TEIL      ------->TEIL    --------->HSFB2a(2)                                               <---------ANAC58      --------->ARR14(2)                                                                <---------ANAC46      <---------ARR14(2)                             <---------YAB1--------->ATHB12     <---------ANAC58     <---------ARR14(1)--------->LBD16<---------DEAR3(1)        <----------DOF2<---------TOE2(3)   -- -----ZmHOX2a(2)      <---------HSFB2a(2)--------->ALFIN1   <---------ZAT18  <---------AHL20(2)  <--- --->At4g35610     <-----------GT1   <---------At4g35610    --------->ZAT18 --------->AHL20(2) <-----   gatcatcgaatctgaacattttttccagagagaaatttgagcggtgtttcgaattttcaatgtgccctttgatttgaattttatgttatggcgcatctta  2168400                      --------->YAB1             <------NtERF2            <---------RRTF1(1)            <---------ERF1            <---------ORA47(2)            <---------RAP2.3(1)            ------>NtERF2           --------->ANAC46           <---------RRTF1(3)           <---------RAP2.3(2)                                  ----------->TGA1           <---------ATERF1(2)                            <---------MYB52(1)           <---------RAP2.3(3)                --------->ANAC58  ----------->HVH21           <---------RRTF1(2)                 --------->ANAC46<---------ANAC58      <---------ICU4 <---------YAB1           --------->ANAC58<---------ANAC58 --------->GT1 ------>NtERF2            ----------->RAV1(1)   ----------->RAV1(2)  ----------------->AGL2 ---------CBF--------->RAP2.3(1)     <------ZmHOX2a(1) <------NtERF2               ----------------->AGL3 ----YAB1  <---------DEAR3(1)      <---------TOE2(3)  ------>NtERF2              ------>NtERF2<------   attgttaattttgacggcgcattataagaactcatttaaggacaacataagcaaggggccgatagcctgacgagttgacattcggcccatatgtagattt  2168500                                                                --------->ARR14(1)                                                               <---------ARR14(2)                                                               --------->ARR14(2)                                                               <---------GLK1(2)                              <---------ANAC58                <------ZmHOX2a(1)                              <---------ANAC58              <---------TOE1(3)                        <---------ANAC46            ------>NtERF2                        <---------ANAC58           ----------->HVH21       <------MYB46(1)                        <---------ANAC58          --------->LBD16          <------MYB83                     ----------->HVH21            ------>NtERF2--------->ARR11(1)        --------->AHL20(2)--------->DOF5.7(2)    --------->ANAC46         --------->MYB59          <-        --------->YAB1<---------TGA2(2)         <---------LBD16*TSS       <---------TOE2(3)<---------ANAC58 -----TBP            ----------->TGA1      <-----------GT1  <---------TOE2(3)              <---------ANAC58   ataggcccattaatatcaaatcgatgacgtttacttgccatctaattacctccgcgactgataaggattcgcttattaggtttttttgagttttcgtctc  2168600                                                                                   <-------GAMYB                                                                                  ----------->GT1                                                                                  <---------MYB46(3)                                                                        ------->MYC3                                    --------->ARR14(2)                  <-------MYC3                                    <---------ARR14(2)                  ------->MYC2                                   <---------HSFB2a(1)                  <-------MYC2                               ----------->HVH21            ------>NtERF2         --------->MYB52(2)                              <---------MYB55(2)           --------->RAP2.6(2)    <------MYB46(1)                              --------->MYB46(3)           --------->ANAC58       <------MYB83             <------------AtMYB77--------->SPL7            --------->ANAC46     <--------P            --------->At4g35610<---------SPL7              <----------ID1    >>>>>>>GRF7            <---------At4g35610--------->LBD16             --------->ANAC58 <-----------RAV1(2)        --------->ANAC58     <---------LBD16             <------ZmHOX2a(1)<-----------HVH21        --------->ANAC58     --------->ANAC46        ---------->DOF2   <---------ANAC58 --------MYB52(1)          <---------ALFIN1      ----------->GT1       <---------ANAC58   cgttttctgaaggcaactgctaatttcttccaccggacgattcgacaaaaatggtgaaaggacgccaaggagaacgtgtcaggttggttattcatcttct  2168700                                                       --------->ATHB12                                                       <---------ICU4                                                      --------->ICU4                    <----------DOF2                                                    --------->bZIP60(1)            ------>ZmHOX2a(2)                                                   <------NtERF2                 ------->TEIL                                                   ------------>ATHB5            <---------ARR11(3)                     ---------->DOF2           --------->ZAT2<---------ANAC58    <---------ARR14(2)                  --------->At4g35610          --------->At4g35610               --------->ARR11(3)              ------->TEIL                     <---------At4g35610 <-----------GT1<---------GLK1(1)              --------->ARR14(2)       --------->LBD16<---------YAB1    <----------DOF2 <---------DAG2              <---------ARR14(2)       ------>ZmHOX2a(1)     <---------ANAC58    <---------AGP1<-----             <---------CCA1(2)       ----------->RAV1(2)     <---------ANAC46    --------->ARR14(2)   atgttctctaattctgtatctgctaaagcttcacattgctcctgaaattagctggcatcattggcgtttttacactttctatggatctcgcttttagctt  2168800   --------->At4g35610                       --------->TOE2(3)   <---------TOE2(3)   --------->ZAT2                      ------>MYB46(1)           <---------TOE1(3)   <---------At4g35610                 ------>MYB83        --------->ICU4     --------->ANAC58   ----------->RAV1(2)               <---------MYB59     --------->TOE2(3)    --------->ANAC46   <---------ZAT2                --------->ZAT14   --------->TOE2(3)          --------->ANAC58 <-----------RAV1(2)             <---------ZAT14   <----------DOF2  <----------DOF2 -----DOF2                     --------------->AtSPL8   <---------ZAT6   ---------->ID1       -------   ttctcagctggattttggatgtgtttcaatctctgtgtaccaaattatctcaactttagtcttaattaagcttttgtctcactcaattttgtttttatgt  2168900                                                     --------->ANAC55(2)                                          <-------TEIL  --------->ATHB12                                          <---------ZAT18                     <-----------------AGL3 --------->ZAT18                         ---------->ID1                     ================================================================================               --------->At4g35610        --------->ZAT18    <------------------------ANAC81              >>>>>>>GRF7                --------->ALFIN1   <-----------RAV1(1) --------->ZAT14   <--           <-----------HVH21          --------->DAG2 <---------ANAC55(2)       <---------DAG2     --- -->ANAC55(2)<-----------RAV1(2)    ---------->DOF2 <-------TEIL               <----------DOF2  >>>>>   gatgcagactctatgtcaggggaaccatacttggctacaaaaggtgcgcattgatacatgatttgttgttgttgttttccactttagtcgtttttgttct  2169000               <---------ARR14(2)                                                                 ---               ------->TEIL                                                                   -------               <-----------ARR10                                      <----------DOF2         ------>ZmHOX2a(1)               --------->GLK1(2)                                      ===============================           --------->At5g28300                                       <---------ANAC46   --------->MYB59   <---------------AGL15                                             <---------ANAC58   --------->MYB52(2)  ----------------->AGL3                                             <---------ANAC58================ ==================MADS_MADS                <----------DOF2     --------->MYB52(2)   ------------>MYB.PH3(2) -------At4g35610                   >>>>>>>>>GT-1      <---------bZIP60(1)        =================== ------>ZAT2   --------->ARR14(2)----------->GT1       --------->bZIP60(1)  <------ZmHOX2a(1)-------- >>ZML2   ----------->GT1  --------->YAB1   <---------DAG2    --------->ZAT14     ---------->DOF2 ===   agctcccataaacagtgaatcttggctgataatactggttaatacactttttttatgacctcagtttagttgcttataggattcaaaagttagttcctga  2169100  Previous    Next  AGI:  At1g07060.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO21393.1) Range:  from: 2167106    to: 2168396    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g07070.1    Description:  60S ribosomal protein L35a (RPL35aA). Identical to 60S ribosomal protein L35a-1 (RPL35AA) [Arabidopsis Thaliana] (GB:Q9LMK0); similar to 60S ribosomal protein L35a (RPL35aC) [Arabidopsis thaliana] (TAIR:AT1G74270.1); similar to unknown [Populus trichocarpa] (GB:ABK93065.1); contains InterPro domain Ribosomal protein L35Ae; (InterPro:IPR001780) Range:  from: 2168563    to: 2169850    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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