Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                         --------->LBD16                                     =====================================HOX2a_HOX2a                                     ------>ZmHOX2a(2)                                    ------>NtERF2                 ===========================HOX2a_HOX2a                                  --------->DEAR3(1)  --------->ANAC58     <---------HSFB2a(1)                                        <------ZmHOX2a(1)  --------->ANAC58     --------->HSFB2a(1)                                    --------->LBD16  --------->ANAC46    ------->TEIL  <------ZmHOX2a(2)                        --------->HSFB2a(2) --->ANAC46      ==========================HOX2a_HOX2a                       <---------HSFB2a(2) ->ANAC46        <------ZmHOX2a(1) <---------ARR14(2)              <------ZmHOX2a(1) --------->DEAR3(2) ----GT1        <----------ID1     --------->ARR14(2)           --------->HSFB2a(2)<---------ARR14(2) --GT1       ---------->DOF2     ----------->ARR10              <---------HSFB2a(2)--------->ARR14(2)   atacaagaaatatacaaaaggacgaacctttgaagacgatccgcgagaaacattgtttgatgacatcgaggagtctcttccagaggaaacgacgacggag  2162900                                       <---------At4g35610                                       --------->At4g35610                                       --------->ZAT2                                       <---------ZAT2                                      ----------->RAV1(1)             --------->ANAC58        <-----------RAV1(2)             --------->ANAC58      <------ZmHOX2a(2)            <------NtERF2          --------->CCA1(2)           ------>NtERF2          <---------ARR14(2)          --------->DEAR3(1)      --------->ARR11(3)          ----------->HVH21       --------->AGP1         --------->DEAR3(2)       --------->ARR14(2)   <---------ANAC58               <---------ARR11(3)                 --------->MYB52(1)   <---------ANAC58              <---------GLK1(1)                --------->YAB1  <---------ZAT18                --------->GLK1(1)                ------>ZmHOX2a(2)     <---------ANAC46  --------->ZAT18     --------->At4g35610                  --------->ALFIN1      ---------->DOF2   agattgcgcttgccgacggaaggaagccgaataagagatccagcagagaaggaaacagagagtgttgatcgtaacgaagaagggaaagagccgtagagag  2163000                           <------ZmHOX2a(2)                      --------->LBD16                           =======================HOX2a_HOX2a    <------NtERF2                          <---------ARR11(3)                    ------>NtERF2                    <---------ANAC46                   <------MYB46(1)                    <---------ANAC58                   <------MYB83                    <---------ANAC58                   <---------MYB46(3)    <---------YAB1                  --------->ZAT14                     <---------AtMYB61   <----------DOF2                  --------->ZAT18                    <--------P<---------DEAR3(1)                  <---------ZAT14                   <-------GAMYB<---------LBD16               <---------ANAC46                    <---------MYB46(3)---------->DOF2              --------->ATHB12                     --------->ATHB12 <------NtERF2             <---------YAB1==========================HOX2a_HOX2a<---------RAP2.3(1)                 -           --------->At4g35610             <------ZmHOX2a(1) <-----------HVH21                      <           <---------At4g35610         --------->CCA1(2)    <-----------RAV1(1)                  <---         <---------ANAC46 --------->ARR11(3)  <------ZmHOX2a(1)--------->ETT(2)                  <--- <----------DOF2 --------->ALFIN1<---------ANAC46 <---------AtMYB61--------->LBD16     ---------->DOF2   aggctttaatggctgatgagtggagtgagatcatggtggagataaggaggagatggttggttttgtcgccggaaagcttttgatagtgagaaagctccga  2163100                                                             <-----------HVH21                                                          <---------TGA1a                     <------NtERF2                            ========================================bZIP_DOF                  <------                        --------->LBD16                   <---------O2                      ---------                       <---------ANAC58                   <---------bZIP60(2)             <---------TGA1a                       <---------ANAC46                   <---------ANAC46                ===========                       <---------ANAC55(2)                <---------ANAC58                ===========          <----------DOF2 <---------ZAT18                 <---------ANAC58                <---------bZIP60(2)          <---------WOX13(1)<----------DOF2          <---------ANAC58                     <---------ANAC58       <---------YAB1  <---------ANAC58              <---------ANAC58                     <---------ANAC46   ------->TEIL        --------->ANAC55(2)           <---------ANAC46                     <---------O2 -------->ANAC55(2)    <---------ANAC55(1)          <-------TEIL                          --------->O2 ---------ANAC55(2) --------->GLK1(2)              --------->GLK1(2)                      --------->TGA1a ------ATHB12       <---------ARR14(2)            <---------GLK1(2)--------------->AtSPL8 <---------ANAC58 ---ZmHOX2a(2)     <---------ARR14(2)     --------->YAB1<-----------HVH21          --------->At4g35610   tcatgtattttgatttatggagattccgtgctcttctgtttctctcataagagattcgtgtcgtgtcagatagtactatttcatccgatgagacgtggcg  2163200                   <---------AHL20(2)  --------->At4g35610                            --------->At4g35610                   --------->AHL20(2)  <---------At4g35610                          <---------HSFB2a(2)                 <----------DOF2   --------->AHL20(2)                               --------->HSFB2a(2)               <---------YAB1      <---------AHL20(2)       --------->ATHB12<---------ANAC46              <---------ARR11(3)<---------ICU4      -------->ATHB1         <---------At4g35610   <---------YAB1--------->TOE2(3)<---------YAB1    --------->YAB1      <-------GAMYB <---------At4g35610 ---------------WRI1           <---------YAB1       --------->ATHB12   --------->MYB52(2) >ALFIN1   <-------GAMYB       --------->ICU4      <---------YAB1      <---------MYB46(3) ===========================bZIP_DOF---------->DOF2<---------ATHB12    <-----------RAV1(1)>>>>>>>>>TBF1 ==================MYC_MYB   --------->YAB1   --------->GLK1(2)     ------------>MYB.PH3(2)   atattatcaatggggttatctttaatttgtttgataattaaagctgaaattctatcattggatgatttgtagtttgttgctgattttcagaagaagaaac  2163300                                                                                                   <-                                                                                                  ---                                                                      <---------ZAT14            ----                                       <--------HAHB4                 --------->ZAT14            <---                                      --------->ICU4                  <---------ZAT18           -----                                      <---------YAB1                  --------->ZAT18          <-----                           --------->TOE2(3)             <---------ARR11(3)                   <------                       <---------ATHB12<---------ICU4    --------->ARR11(3)                   <------       *TSS    ------->TEIL--------->TOE1(3) <---------ZAT6      <---------YAB1              <-------TEIL    <-------TEIL   ------------>CBF<---------YAB1        <---------GLK1(2)                  ---------   tacaggtacaagagttgaatctccaatgaccttaaatacgataattagagttgaaattagatttttgatgagtgaacttagtctccatccataggtgcgt  2163400    --------->AHL20(2)    <---------AHL20(2)  <---------MYB52(1) -----NtERF2 --->NtERF2 ----->DEAR3(1) ------DEAR3(1) ---->ATERF1(1)                                       <---------DAG2 ----ATERF1(1)                                        <----------DOF2 ---ANAC58                                      <---------MYB52(1)            <---------AtLEC2   <--- ---ANAC58               ----------->GT1      <---------MYB46(3)          <----------DOF2 --------->ATHB12 >ALFIN1<---------AHL20(2)                    --------->ATHB12         ------>ZmHOX2a(1) <---------YAB1   cgccgtttaattcattttccaagtgcaaggtaacaatgcaggtttgattcgttgggctttttcagcaattgtcctactttggatggacaatatgatgggc  2163500                          <---------TOE2(3)                      <---------REM1(1)                    <---------ANAC46                   <---------AtMYB61  --------->ZAT18    ---------->DOF2              <---------ANAC58        <---------ZAT18------>ZmHOX2a(2)     <---------AHL20(2)   <---------TOE1(3)        --------->ARR11(3)   --------->ANAC58 --------->YAB1<----------DOF2    ==========================HOX2a_HOX2a --------->ANAC58 -------DOF2  <---------ANAC58    ------>ZmHOX2a(1)<---------ARR11(3) ---------->DOF2       ---------   ttttcatattatttgggcgttttggtgtaaggtttcctagtgggctactatatgatctaaaaaggaatttgagaaagcactagcagtaataccgataagc  2163600                <---------REM1(1)                --------->ALFIN1                     --------->ZAT14                      --------->SPL7    <---------MYB52(1)                              <---------DAG2           --------->ANAC46      --    --------->DOF5.7(2)                             <----------DOF2          ----------->GT1   <-----   --------->TOE2(3)                    <---------ARR11(3)                   --------->ANAC58  ------   --------->TOE1(3)                    --------->ARR11(3)      --------->YAB1        <--------------  ----------->GT1                       <---------GLK1(2)      <------ZmHOX2a(2)      --------------- <---------TOE1(2)                    ----------->ARR10   --------->ANAC46   --------->ANAC58 ------- ->DOF2         <---------ANAC46---------->DOF2  <---------ALFIN1 ---------->DOF2     ---------------   tcgaacgttaatttggaggtgtagaacttatatacaaagttagattttccaacactttacacacgatcaaaagacaaacacgaaaaaaactgtacgatat  2163700                             <---------TOE2(3)                  ------>ZmHOX2a(2)                 <------ZmHOX2a(2)                <---------ARR11(3)                       --------->ZAT6                --------->ARR11(3)                      <-----------------AG    --------->AHL20(2)   --------->CCA1(2)           <---------WOX13(1) ------>P       --------->ARR14(3)                 <---------ICU4 ----ARR11(3)   <---------ARR14(3)                 --------->ATHB12 --->ARR11(3)   <---------ARR14(2)                 <--------ATHB1                                  <- -AtSPL3        --------->AGP1                     --------->ATHB51                               --- >AtSPL8        <---------AGP1                    --------->ICU4                             -------- -->GLK1(1)     --------->ARR14(2)              --------->YAB1                             --------->LBD16 >AtSPL3      ----------->ARR10     <---------ICU4<---------YAB1  ---------->DOF2         --------->ANAC46   ctaccattaactacataagatcttgagatttaagttaaacattgtttgaagaataattgactctaagggaaagtatgccaaacaagttttatccgaaaag  2163800  Previous    Next  AGI:  At1g07040.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G27030.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41035.1) Range:  from: 2160937    to: 2163307    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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