Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100       <-----------HVH21    --------->LBD16  <---------LBD16 ----->ZmHOX2a(2) ------->GLK1(1) -----ZmHOX2a(2) --------GLK1(1) ------>ARR11(3)                                                                    --------->ANAC46 ---------ARR10                                                          ------>MYB46(1) -------ARR14(2)                                                         -------->P <---------HSFB2a(2) -------ARR11(3)                                                         ------>MYB83 ------>ARR14(2)                                                        ------>ZmHOX2a(1)   <<<<<<<<< ---->TEIL                                                             <---------MYB59    --------->YAB1 --->ANAC46                                                         --------->GLK1(2)--------->LBD16 ---LBD16                        --------->At4g35610               <---------GLK1(2)--------->HSFB2a(2) -DOF2 --------->ZAT14           <---------At4g35610    <---------------AGL15      <---------LBD16   gatctccggtccagtctccgtctctgtctcttcttcgctgtctgtgttatcgtttatactaatagaagagattcctacctctgcatccggaatcatacaa  2155600                                     ------->GAMYB                                  --------->MYB52(1)                                <---------MYB46(3)                                <---------ARR11(3)                                <------ZmHOX2a(2)                          ------>ZmHOX2a(2)                                    ----------->ARR10                         <------ZmHOX2a(2)                                 <---------ZAT2   <---------MYB52(1)   --------->MYB52(1)                                 --------->At4g35610  <-------GAMYB         --------->ARR14(2)                                 <---------At4g35610  <-----------HVH21     <---------ARR14(2)                       --------->AHL20(2) <---------DEAR3(2)  <---------RAP2.6(3) --------->MYB46(3)             <-------GAMYB        ------>NtERF2<-------TEIL <---------MYB46(3)   --------->DEAR3(1)            <---------MYB46(3)   <---------DEAR3(1)        -- <<<<<<<<LFY       <---------ALFIN1 <------------MYB.PH3(1)      <---------AHL20(2)------>ZmHOX2a(2)   tggccgttagagagaccatctccaccgatcggaagataactgtcttcttcatcgtcgttggagttatataaatcgacggctgagatcggttcgtaatagt  2155700                                                                                        ------>ZmHOX2a(2)                                                                                       --------->GLK1(1)                                                                                       <------ZmHOX2a(2)                                                                                      <-----------ARR10                                          <---------MYB46(3)                          <---------ARR14(3)                                        <-------GAMYB                                 <---------AGP1                                       <---------ANAC46                               <---------ARR11(3)                                      <------NtERF2                      <---------TOE2(3)            --------->ANAC46         --------->LBD16                    --------->MYB52(1)           <---------LBD16           ------>NtERF2                      <---------DOF5.7(2)         -    <---------ARR14(2)              --------->LBD16                 --------->LBD16   <---------ARR14(2)    --------->ARR14(2)             <---------LBD16                <---------LBD16     --------->ARR11(3)    ------->TEIL           <---------GLK1(2)                    ------->TEIL          --------->ARR14(2)   <---------CCA1(2)       --------->ARR14(2)             <---------ATHB12           <---------CCA1(2) --------->GT1             <---------ARR14(2)             <---------ATHB51        <---------At4g35610   cttgtgaatcttcgacggaattagagtcggaatcgctcccggcgttgttgttctctgcaaataatgcatccggttaacgaattaagcagatctcaatttc  2155800                                 ------>ZmHOX2a(1)                               ------>ZmHOX2a(2)                              <------ZmHOX2a(2)                             <---------GLK1(2)                                      <---------HSFB2a(1)                             --------->ARR14(2)                                     <---------HSFC1(2)                             <---------ARR14(2)                            ------>MYB46(1)                          <---------ANAC55(2)                              ------>MYB83                          --------->ANAC55(2)                           --------->HSFB2a(1)      --------->LBD16    <---------LBD16                --------->DAG2  --------->HSFC1(2)  --------->ARR14(2)    --------->MYB52(1)             ---------->DOF2  <---------HSFC1(2)          <  <---------ARR14(2)   <---------SPL7      --------->AHL20(2)           <---------HSFB2a(1)       ---  --------->GLK1(2)   <---------ANAC58     <---------AHL20(2)          ------->TEIL --------->HSFC1(2) --------->DOF2       <---------ANAC58  <XXXXXXXXXXXXXXXXXXXXXMIR4221 <---------ARR14(2)        <----   caaaaatccgaagaaacaaatgtgtcttacggatcctcataagaattaaacagaagaaaaaggagagtagaagaaccttccatagacccttcgatgggat  2155900           =======================MYC_MYB           =====================================bZIP_DOF           <---------TGA1a<-------GAMYB           <---------O2  <---------MYB46(3)                                         --------->ANAC58    <---------LBD16     <---------TOE2(2)                                           --------->ANAC58   --------->At4g35610  <---------TOE1(2)                                           --------->ANAC55(1)   ----------->RAV1(2) <------NtERF2                                                --------->ANAC55(2) ---------ATHB12     <---------ANAC46                                               --------->ANAC46 ------>WOX13(1)     --------->ETT(1)              <---------MYB46(3)        ----------->GT1 --ZmHOX2a(2)      <-----------HVH21 ---------->DOF2           ---------->DOF2     <---------LBD16   caatcacctggagacgagagatgtcggaggttgaactgaaaaagacgatgaagttgttgaactgaaaaagacgatgaagttgttacacggattgagacga  2156000                                    ----------->TBP                                  <-----------TBP                                --------->AHL20(2)                                <---------AHL20(2)                                <-----------TBP                              <-----------TBP                              <---------AHL20(2)                              --------->AHL20(2)                            <-----------TBP                            --------->AHL20(2)                            <---------AHL20(2)                          <xxxxxxxxxxxxxxxxxxsmallRNA(si3)                          <-----------TBP                   --------->ARR14(2)                   <---------ARR14(2)       *TSS        <---------ARR11(3)       <---------LBD16    --------->AHL20(2)   --------->WRKY12--------->AGP1 <---------AHL20(2)                                  ---------->DOF2   --------->WRKY38(1)  <-----------TBP                                            ------->TEIL  ----   ----------->HVH21 <-------TEIL --------->AHL20(2)       --------->ZAT18    --------->YAB1   <----- --------->At4g35610 ----------------->AGL3        ---------->DOF2           <---------ATHB12 <------ZmHOX2a(1) <---------At4g35610<------ZmHOX2a(2)             <---------AHL20(2)   ------>NtERF2 --------->YAB1 -   ctgagttgactcggattaccagatccatatatatatatatataagcccatattaaaagatgcccactatatgaggcccaaacatgaatcaaagtcaggac  2156100          --------->At4g35610                                             --------->GLK1(1)     -----          ----------->RAV1(2)                     --------->GLK1(1)       <---------GLK1(1)  --------       <---------At4g35610                       --------->ARR11(3)  <---------LBD16   --------->LBD16 ----->TOE2(3)                                   <---------ARR11(3)----------->HVH21  <---------HSFC1(1) ----ARR11(3)                              <---------ZAT6       ------->TEIL          --------->HSFB2a(2) -------->MYB52(2)                         --------->ALFIN1--------->CCA1(2)          <---------HSFB2a(2)   cttagttgcatcggctggaacttgaaacagacacaaattatccgagtgtgagatatcaaatatacgaatttgacggagttgcgatattccagaaacatca  2156200                                                                                ---------->DOF2                                                                            --------->ANAC58                                                                            --------->ANAC58                                                                            --------->ANAC46                                                                           ------>MYB83                                                                           ------>MYB46(1)                                                                         --------->TOE2(2)                                                                         --------->TOE1(2)                                <---------ANAC58                        --------->MYB46(3)                                <---------ANAC46                       -------->P                                <---------ANAC58                       ------>MYB46(1)                           <-----------RAV1(1)                         ------>MYB83                           --------->ALFIN1                           ------>MYB46(1)             ---                     ------>ZmHOX2a(2)                                ------>MYB83--------->ANAC58---                     <---------LBD16                                --------->MYB46(3)            <--                    <------ZmHOX2a(2)                               <---------MYB59           <------                   --------->ARR14(2)                              --------->ANAC58          <------- <----------DOF2   <---------ARR14(2)   --------->At4g35610        --------->ANAC58      --------->AHL20(2) ----->DOF2       <---------GLK1(1)     <---------At4g35610      <------ZmHOX2a(1)--------->ANAC58<-- ->TOE2(3)   ---------->DOF2 --------->ALFIN1           <------ZmHOX2a(1)--------->AtMYB61<---------AHL20(2)   aagcttttaaaaaaaaaaagagatcgggagtgtggcgttatcaactgagaattcagaaggatgcgaaggacccaacctacgctaaagccaattttatcac  2156300                                                       <----------DOF2                                                       <---------YAB1                                                      <---------ANAC58                                                 <-----------RAV1(1)                                           <xxxxxxxxxxxxxxxsmallRNA(le3)                                           <xxxxxxxxxxxxxxxsmallRNA(fl3)                                          <xxxxxxxxxxxxxxxxsmallRNA(i)                                          <xxxxxxxxxxxxxxxxsmallRNA(s)                                          <xxxxxxxxxxxxxxxxsmallRNA(se3)                                          <xxxxxxxxxxxxxxxxsmallRNA(fl3)                                          <xxxxxxxxxxxxxxxxsmallRNA(le3)                                          <xxxxxxxxxxxxxxxxsmallRNA(si3)                                         <xxxxxxxxxxxxxxxxxsmallRNA(le3)                                         <xxxxxxxxxxxxxxxxxsmallRNA(se3)                                         <xxxxxxxxxxxxxxxxxsmallRNA(si3)                                         <xxxxxxxxxxxxxxxxxsmallRNA(fl3)                                        <xxxxxxxxxxxxxxxxxxsmallRNA(si3)                                        <xxxxxxxxxxxxxxxxxxsmallRNA(se3)                                        <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                        <xxxxxxxxxxxxxxxxxxsmallRNA(le3)                                       <xxxxxxxxxxxxxxxxxsmallRNA(se3)                                       <xxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                       <xxxxxxxxxxxxxxxxsmallRNA(s)                                       <xxxxxxxxxxxxxxxxxxsmallRNA(se3)                                       <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                       <xxxxxxxxxxxxxxxxxsmallRNA(le3)                                       <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                       <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                       <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                       <xxxxxxxxxxxxxxxxxsmallRNA(fl3)                                      <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                      --------->ZAT6  <---------ANAC58                                      <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                      <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                      <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                   <xxxxxxxxxxxxxxxxsmallRNA(si3)                                   <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                   <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                   <xxxxxxxxxxxxxxxxsmallRNA(le3)                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                  <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                  <xxxxxxxxxxxxxxxxxsmallRNA(le3)                                  <xxxxxxxxxxxxxxxxxsmallRNA(fl3)                                  <xxxxxxxxxxxxxxxxxxsmallRNA(le3)                                  <xxxxxxxxxxxxxxxxxsmallRNA(se3)                                  <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                  <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                  <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                 <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                 <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                 <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                 <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                <xxxxxxxxxxxxxxxxsmallRNA(fl3)                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                               <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                               <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                               <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                               <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                               <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                               <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                               <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                <------NtERF2  <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)               --------->LBD16 <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)              <---------LBD16 <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)             <---------LBD16  <xxxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)            --------->ZAT2    <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)            <---------ZAT2    <xxxxxxxxxxxxxxxxxsmallRNA(si3)           --------->MYB55(1) <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)          --------->MYB46(3)  <xxxxxxxxxxxxxxxsmallRNA(fl3)          <---------MYB55(2)  <xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          <---------ALFIN1    <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          <-----------RAV1(2) <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <---------At4g35610  <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <-------TEIL            <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ------>At4g35610             <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ------>ZAT2------>MYB46(1)   <xxxxxxxxxxxxxxxxxxxsmallRNA(l2) -------ZAT2------>MYB83      <xxxxxxxxxxxxxxxxsmallRNA(fl3) -----GT1<xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) --YAB1 ------->TEIL      --------->TOE1(2)<xxxxxxxxxxxxxxxsmallRNA(si3) -------At4g35610       --------------->AtSPL3--------->AtMYB61         <---------YAB1        <------ZmHOX2a(1)   agcttagatgcaccagccgggaatcaaacgtactattctaccactagaccactggtgcttattgtttagtttttatatttgtgtaaaacaaatagaggag  2156400                                        <---------MYB46(3)                                      <-------GAMYB                                     --------->MYB52(2)                                     --------->MYB111(2)                         --------->AHL20(2)                                              --------->ARR14(2)                         <---------AHL20(2)                                              <---------ARR14(2)                  --------->TOE1(3)  --------->MYB55(2)                                  <---------MYB52(1)                  --------->TOE2(3)  <---------MYB46(3)                                 <---------SPL7              ---------->DOF2        --------->MYB111(1)                  --------->ARR11(3)         --------->CCA1(2)          <---------MYB55(1)      <-----------HVH21<----------DOF2        <---------ARR11(3)         <---------MYB52(1)    --------->At4g35610------>ZmHOX2a(2)      <---------YAB1    <---------AHL20(2)           <---------GLK1(2)<---------MYB52(1)<---------RAP2.6(3)   <---------ATHB12     --------->AHL20(2)           --------->ARR14(2)   <---------ARR11(3)   aacaaatcaagataaacaaagcttaatttaaaaactcggtagttgttgtgatatcgattcgctgtcccatccgtttgatctttatcaggccgttctgaat  2156500  Previous    Next  AGI:  At1g07020.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO21378.1) Range:  from: 2155212    to: 2156007    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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