Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 <------NtERF2              ------>NtERF2              --------->LBD16             <---------RAP2.6(2)             --------->ATERF1(2)             --------->DEAR3(1)             <---------ATERF1(2)                         ------>NtERF2       ------>ZmHOX2a(1)                                 <---------At4g35610       --------->HSFB2a(2)                              --------->RAP2.6(2)       --------->LBD16                                <---------RAP2.3(1)      <---------LBD16                                 ------>NtERF2--------->MYB46(3)     ----------->RAV1(2)                             --------->ANAC58--------->At4g35610      <------NtERF2 <---------KAN4(1)                                   <---------DEAR3(1)                      <------- --------->KAN4(1)   --------->ANAC46           ---------->DOF2  ================RAV        <-------- ---------KAN4(2)  --------->MYB52(1)<---------ARR14(2)<------NtERF2 ----------->RAV1(2)   <---------ABI4(1) ---->ANAC58--------->ATERF1(1)      --------->ARR14(2)--------->RAP2.3(1)               <---------DEAR3(1) ---->ANAC58--------->DEAR3(2)      ----------->HVH21--------->ANAC58--------->ZAT2      --------->DEAR3(1) -->DOF2    --------->RAP2.3(1)    --------->At5g28300<---------ATERF1(1)                <---------ATERF1(2) >AtMYB61   <------NtERF2------>NtERF2       --------->At4g35610 ----------->RAV1(1)  <---------ALFIN1 >RAV1(1)  <---------ATERF1(1)    --------->RAP2.6(2)--------->ANAC46<---------At4g35610--------->DEAR3(2)   gcaatattcctggagccggctaaacggagcccaaggccgtaaccagtagctaaagacgccgctaatacaacagctgaagtcgctagcctcaccggcggtg  2135300                                                                  ----------->RAV1(2)       <------NtERF2                                                            <---------HSFC1(2)            --------->ETT(1)                                                            <---------HSFB2a(1)         <-----------HVH21                                                          --------->ARR14(2)           <---------MYB46(3)                                                          <---------GLK1(2)            <------MYB83                                                          <---------ARR14(2)       <---------MYB46(3)                                      <---------YAB1   --------->LBD16         <---------YAB1                              --------->At4g35610     <---------LBD16          <---------ZAT6                              <---------ZAT2         <---------LBD16       <---------ARR14(2)      <-                            <---------ZAT18        <---------GLK1(1)       --------->ARR14(2)     <--         --------->MYB46(3) --------->ZAT14       <---------ARR14(2)       --------->ARR11(3)  <----- --DEAR3(2)   <---------MYB46(3)   ------>ZmHOX2a(1)--------->MYB52(1)   ----------->ARR10<---------DEAR3(1) -DEAR3(1) --------->MYB52(1) <---------At4g35610 --------->ARR14(2)  <---------ANAC46 <------MYB46(1)   tcattttctcaacaatcggttgcaatccagtgagctccttcttattcccatggataccgggattcttcgcctgcgtagatactgatagttggtcggagga  2135400                                                                                    <------ZmHOX2a(1)                                                                                   <------MYB83                                                                                  --------->MYB59        --------->CCA1(2)                                                         --------->MYB111(2)      <---------At4g35610                                                      <------MYB46(1)      <---------ZAT2                                                          --------->MYB59      --------->At4g35610                                                     --------->MYB111(1)      --------->ZAT2                                                          --------->MYB111(2) ----------->RAV1(2)                                                          --------->MYB46(2) --------->At4g35610                                                      --------->DAG2 <---------At4g35610                      --------->CCA1(2)              ---------->DOF2 --------->ZAT2                     <------NtERF2                     ----------->GT1 <---------ZAT2              <---------DOF5.7(2)                      <---------ANAC46 ----------RAV1(2)           --------->MYB52(1)                   <-----------HVH21<------MYB46(1) -------At4g35610 --------->ANAC58 ------>NtERF2              --------->MYB52(1) <--------P -ZmHOX2a(1)      --------->ANAC58<---------DEAR3(1)         <---------ARR14(2)<------MYB83 ---------   agcagctgagctacgagggaacgaaactcgataacgacggcgagatagacactcagacttggagaaacggtgaggtaaagtaggtaggaagtgagaaaga  2135500                                           <---------ANAC46                                           <---------O2                                           ===========================================bZIP_DOF                                           <---------ANAC58                                           <---------TGA1a                                        ----------->HVH21                                        ----------->TGA1                                       --------->At5g28300                                       <------NtERF2                                 --------->ZAT14                                       --------->ATERF1(1)                           <---------ZAT2                                      <---------MYB46(3)                             --------->ZAT2                                     <---------DREB2C(2)                         ------>ZmHOX2a(2)                                     <---------ANAC46                           --------->CCA1(2)                                     <---------DEAR3(1)                         --------->ARR14(1)                                <---------DOF5.7(2)                             <------ZmHOX2a(2)                             --------->TOE2(3)                                 --------->ARR14(2)                             ========================MYC_MYB                   --------->ARR11(1)                             <----------DOF2   --------->ALFIN1                <---------ARR14(2)               ----------->GT1--------->DOF5.7(2)      <-------TEIL            <---------ARR11(3)              --------->DAG2 <-------GAMYB <---------bZIP60(2)                 --------->ARR11(3) <------ZmHOX2a(1)           ========================bZIP_DOF                ----------->ARR10     -- ->DOF2   <------ZmHOX2a(1) ----------->GT1<---------ANAC58                ---------->DOF2<---------MYB46(3)   agaggagaccgaggagaaggtgaaattggagcgttaatggcggtgacgagtgagggattcatggttccctctactgagaaagatccgagcagtcgttgaa  2135600                     <----------ID1                                --------->DAG2                    <---------TOE1(3)                           *TSS--------->DAG2                    <---------TOE2(3)             <---------------------WRI1    --------->CCA1(2)            <---------TOE2(2)          ------->GAMYB--------->CCA1(2)         --------->CCA1(2) -----            <---------TOE1(2)       --------->MYB52(1)     --------->SPL7---------->DOF2 >>>>>>>>>MYB98       --------->GLK1(2)           <---------WRKY38(1)------------------------>ANAC81   --------->MYB52(1) -------->DOF2----------->GT1   <---------ETT(2)--------->CCA1(2) ---------->DOF2     <---------MYB59   aaaaagaagaatcgtagggtttaacgaaaaacagtagacaacggaagaagatagagatgcgaacgaagaaaaggggaaagagatagggcctaacaaaaca  2135700                                         <---------YAB1                                     --------->AHL20(2)                                   --------->AHL20(1)                                  --------->AHL20(2)                           --------->ARR11(3)                   <---------HSFB2a(2) --------->YAB1                          <---------ARR11(3)                   --------->HSFB2a(2)<---------YAB1       <-----------GT1--------->At5g28300        <----------DOF2           --------->YAB1 <---------ANAC58        ------->GAMYB       <---------DAG2          --------->YAB1    <---------ANAC46     <---------DOF5.7(2)  <---------ARR14(2)          <---------AHL20(2) <---------ANAC55(2)  --------->MYB52(1)  --------->ARR14(2)         <---------AHL20(2)  <---------ANAC58  --------->HSFB2a(2) ---->TOE2(3) --------->SPL7 --------->AHL20(2)  --------->ANAC55(2)--------->DOF5.7(2)      <-------   tcaaaatcccctttcgaacgtccagacgttttttaataatattataaaactacgtgttgttttactcttcggtaacggtaagatgtttacataaaaaaac  2135800                 <------------CBF            <---------ANAC46                                                                  -------      ------>NtERF2      --------->ANAC58                                                    --------     --------->ANAC58    --------->ANAC46                                                 --------->MYB46(3)     --------->ANAC46    --------->ANAC58                     --------->ANAC58            <---------ETT(2)     --------->ANAC58 --------->ARR14(2)            <----------DOF2                ----------->HVH21 ---ID1     ----------->GT1  ------>NtERF2         *TSS       --------->ANAC58  <---------DEAR3(1)   aaattagacgccttgtgtaaattggaaacgccacgatttcttctctcttcttggctcttagggctcgctaaattttctcagggctgtgaccatcgaccat  2135900                 --------->At4g35610                 <---------At4g35610               <-----------RAV1(2)            <---------At4g35610            --------->At4g35610            <---------ZAT2            --------->ZAT2            <---------GLK1(1)          <------NtERF2         --------->LBD16                                 --------->WOX13(1)                ----------        --------->ANAC46                               --------->WRKY18(1)               --------->ANAC58       --------->HSFB2a(2)                           --------->WOX13(1)                  --------->ANAC58       <---------LBD16   <---------ARR11(3)        <---------ATHB12                   <------ZmHOX2a(2)       <---------HSFB2a(2)    --------->MYB52(1) ------>MYB83                        --------->ARR11(3)     <---------REM1(2)   --------->ARR11(3)    --------->AtMYB61                     <---------ARR11(3) -->AtMYB61 --------->GLK1(1) <---------DOF5.7(2)------>MYB46(1)               --------->YAB1 ->MYB46(3)<-----------ARR10--------->DOF5.7(2)<---------MYB111(1)          --------->WOX13(1)   cgtcgtcttcgcggagctcagttgaaagatgttaacggctgatataccaccaaatcagtcaatctacataaaacatatcaatgagaagatcaagaaagaa  2136000                                                                               <---------ANAC46                                                                               <---------ANAC58              <-------TEIL                                                     <---------ANAC58        --------->ANAC55(2)                                                <---------ANAC58        --------->ANAC58                                                   <---------ANAC58        --------->ANAC46                                                 --------->ICU4    <---------ANAC58                                                     <---------YAB1    <---------ANAC58                                                <------MYB83   <---------ICU4  <---------YAB1                                <---------ANAC46  <---------YAB1   --------->AHL20(2)                            <---------ANAC58  --------->ICU4   <---------AHL20(2)                            <---------ANAC58   --------->At4g35610 >DOF2  --------->ANAC58                              --------->ICU4<------MYB46(1) <---------At4g35610   ggtaatgcttacgaaattcatataattgcatcggtgattttctaagagtttttgcaatgcttaagtagcttggtaatgcttgtgtgagcttctcttgaat  2136100                   <---------ANAC46                   <---------ANAC58                   ------->TEIL                   <---------ANAC58                 <-------TEIL             <---------TOE1(3)        <---------TOE2(3)          <---------YAB1             <---------TOE2(3)        <---------TOE2(2)     <---------ZAT6               <---------GLK1(2)            ---------->DOF2 <---------TOE2(3)    --------->At4g35610            <---------TOE2(3)   gagttgtctgagtttaaagttgcttaatttgatgtttacgaaggttagattagatgcatttagagttatctttctaagtattagggatttagaatttctg  2136200  Previous    Next  AGI:  At1g06950.1    Description:  ATTIC110/TIC110 (TRANSLOCON AT THE INNER ENVELOPE MEMBRANE OF CHLOROPLASTS 110). similar to unnamed protein product [Vitis vinifera] (GB:CAO21338.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN60839.1); similar to chloroplast inner envelope protein, 110 kD (IEP110) [Pisum sativum] (GB:CAA92823.1) Range:  from: 2130141    to: 2135664    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g06960.1    Description:  small nuclear ribonucleoprotein U2B, putative / spliceosomal protein, putative. similar to U2B'' (U2 small nuclear ribonucleoprotein B), RNA binding [Arabidopsis thaliana] (TAIR:AT2G30260.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21358.1); contains InterPro domain RNA recognition motif, RNP-1; (InterPro:IPR000504); contains InterPro domain Nucleotide-binding, alpha-beta plait; (InterPro:IPR012677) Range:  from: 2135851    to: 2137701    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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