Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->ZAT14                                   ------>ZmHOX2a(2)              --------->ZAT18                               <---------ZAT6              <---------ZAT14                           <---------ZAT14              <---------ZAT18                        <---------ANAC58            --------->LBD16                          <---------ANAC46           <---------ANAC46                      <---------ANAC58           <---------ANAC58                      <---------ANAC58     <---------YAB1           <---------ANAC58           <---------TOE1(3) --------->REM1(2)                        <---      <----------DOF2                 <---------TOE2(3) --------->ZAT14            <-----------GT1     <---------DAG2                  ---------->DOF2 <---------ANAC58<---------TOE2(3)          <----   caatcggcctttcccgtgcaccaattctagtgtattttttaaagttttttttcttgtgtgtagtgatcgtttatgttagtattttttacatcatacaatg  2128400                                                                                          <---------ICU4                                                                                          --------->YAB1                                                                                          -------->HAHB4                                                                                         --------->ICU4                                                <---------AHL20(2)                     <---------ICU4                                             <---------ARR11(3)                        <--------HAHB4                                             --------->ARR11(3)                       --------->ICU4                                           --------->ARR14(2)                       --------->YAB1                                        <---------ANAC46  <----------DOF2          <---------YAB1                                       <---------LBD16 <-----------GT1        --------->AHL20(2)                                 <---------ANAC58  <---------YAB1            --------->AHL20(2)                                 <---------AtLEC2 <---------AHL20(2)         <---------AHL20(2)                                 <---------ANAC58 <---------AHL20(1)     <---------AHL20(2)      ---- ------YAB1                 <------ZmHOX2a(1)--------->AHL20(1)          --------->AHL20(2) <-------- -------HVH21              <---------YAB1  <---------ARR14(2)          <----------DOF2<---------YAB1   tcattgaaaaaactctttcaaagtctaataggattgcatgtctcggatatattatttttactttctgaaaactctttaaataattttcataattatgaga  2128500                                                        --------->ARR14(2)                                                     <---------ANAC46                                                     <---------ANAC58                                                     <---------ANAC58                                           <---------GLK1(2)                                           --------->ARR11(3)        <---------GLK1(2)             --------->CCA1(2) <---------ARR14(2)        <---------ARR11(3)--------->AHL20(1)        ---------->ID1    ---------->DOF2       --------->AHL20(2)  <---------AHL20(2)                            <-------- ------->GT1         --------->AHL20(2)<-------TEIL<-----------GT1           <------ZmHOX2a(1)   <--- -YAB1  --------->ARR11(3)<---------AHL20(2)<---------RVE1(1)           <-----------GT1     ---------   agaaaaaaaagatttttgcaagtttaaattttttaaaaagattcagatttttttttcgtatttggaccttgattttacaggaccgaaactgagtagcagc  2128600                                                                                    ------->TEIL                                              <---------YAB1                        <---------TOE1(2)                                            -------->HAHB4                          --------->SPL7                                            <---------ICU4                          <-------TEIL                                            --------->YAB1                        --------->TOE2(2)                                           <---------ATHB51                       <---------SPL7      <---------REM1(1)                    --------->ICU4                         --------->TOE1(2)  ======================================================MADS_MADS                <---------ANAC58  --------------->AGL15                  <---------ICU4                          <---------ANAC58  <---------------AGL15 <------------CBF--------------->AGL15                   --------------->AtSPL3 -At4g35610    ---------->DOF2  ------>ZmHOX2a(2)                         <----------DOF2           - ------MYB59 --------->ANAC58 --------->ARR11(3)                    ----------->GT1 <---------TOE2(2) >At4g35610  --------->ANAC58 <---------ARR11(3)      --------->TOE2(3)<-----------GT1         ------   ctaacttcatgtagcaagaaagctagtattgtgatcttcttactaattatgctatttcttaaatgtagttttgtaactttgtaacgtacgttgagaatga  2128700                <-----------GT1    --------->AHL20(2)                        <---------YAB1       <---------AHL20(2)          <---------AHL20(2)                      --------->CCA1(2)      <---------AHL20(2)          --------->AHL20(2)                      --------->ARR11(1)      --------->AHL20(2)          --------->YAB1                          <---------ARR11(3)  --------->AHL20(2)          --------->AHL20(2)                      ---------->DOF2          ------  <---------AHL20(2)          <---------YAB1                         --------->AHL20(2)--------->GLK1(1) -------->TOE2(3)  --------->YAB1 <---------AHL20(2)              --------->YAB1  ----------->GT1<--- --->AHL20(2)  <---------YAB1 <---------AHL20(2)            --------->ZAT6--------->ARR11(3) --------   aatattaattaaatgttataactataacttatataattaaaatgttagaaatatgttttctaatactaaaataaaagatatgagtagagaaatcaaacaa  2128800                                                                             <------ZmHOX2a(1)                                                                     --------->HSFB2a(2)                                                                     <---------HSFB2a(2)                           --------->ARR14(2)                     --------->ARR11(3)                           <---------ARR14(2)                 <---------At4g35610                          <------ZmHOX2a(1)                   --------->At4g35610                         <------MYB83               --------->ATHB12================HOX2a_HOX2a                 --------->HSFB2a(2)                --------->ATHB51------>ZmHOX2a(2)       --------->MYB52(1)<------MYB46(1)  *TSS     --------->ICU4 <---------ARR11(3)    --------->ANAC46   <--------P       <---------ANAC58    <-----------RAV1(2)               <------ --->WOX13(1)    >>>>>>>ZML2 ------>ZmHOX2a(2)     <---------YAB1 <---------ARR14(2)          <------ ------ATHB12    <---------HSFB2a(2)    <---------ANAC58   =========================HOX2a_HOX2a     - ---->CBF    --------->GLK1(1)          <---------ANAC46   <------ZmHOX2a(2)----------->GT1   <------   tcactcacaaaacagagttctaggggtaggatcgaccaagtgtcttggaagttataattggatcagatgatctggaacaggataatactctcagtggctt  2128900                     <---------ALFIN1                                                   --------->YAB1                   <-----------HVH21         <---------AHL20(2)                    --------->AHL20(2)    --------->At4g35610<---------ALFIN1   <---------ARR11(3)                       --------->AHL20(1) ---------->DOF2  --------->YAB1          --------->AHL20(2)                       <---------AHL20(1) ---ANAC46      --------->ANAC58          <---------AHL20(1)                    --------->YAB1 ---ANAC58  <---------HSFB2a(2)           --------->AHL20(1)         --------->YAB1<---------AHL20(2) -------->ANAC46--------->ANAC58 --------->GLK1(2)      <---------ANAC58       <---------AHL20(2)---- ---ANAC58  <-----------RAV1(2) <---------GLK1(2)       <---------ANAC58      --------->AHL20(2) ----   ccaagaagcagagcccagaagcatcacacctcgagattctacaatattttatcaaattgcttcttactcattcaaaactatataataaaataagaacaca  2129000                                                  ----------->GT1                                           ==========================================================                                           <---------------AGL15                                           --------->MYB46(3)                                           --------------->AGL15                                          ----------------->AGL2                                          --------->ANAC46                                          --------->ANAC58                                          --------->ANAC58                                       <---------ZAT18                                     --------->YAB1                            --------->ARR11(3)   --------->DAG2                           <---------YAB1                           <---------CCA1(2)    ---------->DOF2                        <------------- ----->ANAC58         ------->TEIL     --------->ZAT14                                 <----------DOF2 ----->ANAC58   ------->TEIL<---------ARR11(3) <---------ATHB12   ---------->DOF2  <----------DOF2   aacaattcaaaacttttgaatctgaatctaaatcttcttagttcacccaataaagtaagaaaacaaaaaaaagagactcaaggctctttcttttcatagt  2129100                                                                              >>>>>>>ZML2                                                                         --------->HSFB2a(1)                                                                         <---------HSFB2a(1)                                                                         ------>ZmHOX2a(2)     ------                                ---------->DOF2                        --------->ARR14(2)      ------                           ---------->DOF2      ---------->DOF2   ----------->RAV1(2)          ------                        --------->LBD16     ------>ZmHOX2a(1)     --------->ZAT2             <-------                       --------->ANAC46     ====================================HOX2a_HOX2a  --------                      <---------LBD16<-----------GT1              <---------At4g35610    --------->ANAC46                    <---------ARR14(2)  <---------ALFIN1          --------->At4g35610    --------->MYB46(3) ==MADS_MADS    <---------At4g35610<-----------HVH21              <---------ZAT2   <---------GLK1(1)< --AGL15<---------ZAT14--------->LBD16 <---------At4g35610      <-----------RAV1(2)--------->GLK1(1)-   tctcttatagtatagttgagcaaacccggaaaagaaaagtcacctcctcacaaagtgtccaatgcctcagctggatcgttctagggtttccacgaccaaa  2129200                                                    <---------MYB52(1)                                                  --------->DEAR3(1)                                                 <------NtERF2                                                ------>NtERF2                                               --------->RAP2.6(2)                                               --------->RAP2.3(2)                                               --------->RAP2.3(3)                                               --------->DEAR3(1)                                               ------->GAMYB                     <---------GLK1(1)                                              --------->ERF1                     --------->GLK1(1)                                              --------->DEAR3(2)             --------->ANAC46                                              --------->MYB46(3)             --------->ANAC58                                              --------->RAP2.3(1)            --------->LBD16                                             <---------ATERF1(1)             --------->ANAC58                                             --------->ZAT2                 <---------LBD16    ------>ZmHOX2a(1)                        <---------At4g35610          <---------ZAT2  ------>ZmHOX2a(2)     <---------ATERF1(1)  --------->At4g35610          --------->ZAT2 >MYB83         <------NtERF2              --------->MYB46(3)       --------->GLK1(2) >MYB46(1)     <---------RAP2.6(3)        --------->At4g35610       <-----------ARR10 --->MYB52(1)  <-----------HVH21    <---------MYB46(3)   --------------->AGL15  --------->ARR14(2) --MYB59<-----------RAV1(1)    <---------ZAT14--------->ATERF1(1)  <---------GLK1(2) ->AtMYB61   --------->ATERF1(1)   --------->ALFIN1<---------SPL7  <---------GLK1(1) ---------ARR14(2)      ------>NtERF2   --------->YAB1   <---------------AGL15  <---------ARR14(2) -------->ARR14(2)  <---------DEAR3(1) <------ZmHOX2a(2)<-----------------AGL3--------->LBD16   ctgatcctctctgtggccgtcgagggcgactactacggtggatcatcagccgccgttcccttcaaatgggaatctcagcccggaactccaagacgactct  2129300  Previous    Next  AGI:  At1g06925.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G20480.1); contains InterPro domain Protein of unknown function DUF537 (InterPro:IPR007491) Range:  from: 2127703    to: 2128610    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At1g06930.1    Description:  unknown protein Range:  from: 2128842    to: 2129882    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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