Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    ---------->DOF2                                              --------->ZAT6                                          ------>ZmHOX2a(2)                                         <------ZmHOX2a(2)                                         --------->CCA1(2)                                        <---------AGP1                                        --------->AGP1  ---------->DOF2                                        <-----------ARR10                                      <-----                                        --------->ARR11(3)                                  ---------                                        <---------ARR14(2)                                  --------- ------>DOF2                            --------->ARR14(2)                    ----------->RAV1(1) ->AG           <-----------HVH21       <---------ARR11(3)        <-----------GT1   ---------->DOF2--   aaagctaagaaaacccattgtcacagacacaaattgtctgaagatctaacaccaaagacaaagccttttaacaacaacaacaacaaaaaagaaaccttca  2103100             <---------ANAC58              ------->GAMYB     <------MYB83                          =============================================MYC_MYB     <------MYB46(1)                 --------->ANAC58                                   --------->ATHB12    <---------MYB46(3)   --------->DAG2 --------->MYB52(1)                             ----------->HVH21    <---------AtMYB61   ---------->DOF2 ----------->RAV1(1)                   <---------O2 ----WRKY12  <---------ANAC58        ------------------------>ANAC81          <---------TGA1a >TOE2(3) <---------bZIP60(1)        --------->ANAC58        --------->At4g35610       --------->ICU4 >TOE1(3) --------->bZIP60(1)       --------->DAG2    >>>>>>>>>TBF1       <------ZmHOX2a(1)<---------MYB46(3) ----->GAMYB <---------ANAC46      ---------->DOF2<------ZmHOX2a(1) --------->CCA1(2)  <---------YAB1   acgggattggtgatgtcgtcttgagcaaaagtagaagaaaagcaacagaagaggaagaagaagagcagaggtatgaggagacgagagacatgatgggtcg  2103200                                           --------->ANAC58                                         --------->MYB52(1)                                   ----------->GT1                              --------->ANAC58                              --------->ANAC58                                           --------->ANAC58                            --------->GLK1(1)                                            --------->ANAC58                          <------ZmHOX2a(1)--------->ANAC58                         <---------WRKY18(1)                 <------ZmHOX2a(1)--------->ANAC58                                 ----------->HVH21               ------------------------>ANAC81                               --------->DAG2  --------              <------ZmHOX2a(1)   --------->ANAC58                         ---------->DOF2   --------   aaaacatatcgagagaggaggaaacagaggagacccaaggaaaaaacgaaatctcgagagagagagagtttagaaggaaaaggccatgaccaagtaagaa  2103300                                    <---------MYB46(3)                                   --------->ALFIN1                                 <---------ANAC58                                        --------->MYB52(1)                                 <---------ANAC58          --------->ANAC58           --------->ANAC55(2)                                <---------MYB46(3)         --------->ANAC46          <---------TOE1(3)                 ---------->DOF2--------->MYB55(2)         --------->ANAC58          <---------TOE2(3)      ---------->DOF2     <------MYB83<---------PCF2  <---------YAB1                <-----------RAV1(2)  --------->ANAC58    --------->MYB111(1)           --------->YAB1             --------------->AGL15  --------->ANAC58    --------->MYB111(2)          <---------ZAT6              <---------------AGL15 ->ANAC58       <------ZmHOX2a(1)<---------ANAC46  ----------->GT1            <-----------------AGL1 ->ANAC58 ---------->DOF2 <------MYB46(1)        ----------->GT1            <-----------GT1         -   acacaagacaaagaaagaggaaagtagttggtattgggtgggagcattgaagagtgataatacgacattttctaagtttgactatttcaggtaatggatg  2103400                                         <------NtERF2                                        ------>NtERF2                                       --------->DEAR3(1)                                       --------->ANAC46                                       --------->RRTF1(2)                                       --------->RRTF1(3)                                       <---------ATERF1(2)                                       --------->DREB2C(2)                                       --------->RAP2.3(3)                                       --------->RAP2.6(2)                                       --------->ATERF1(2)                                       --------->RAP2.3(2)                                      --------->RAP2.6(1)                                      --------->DEAR4(2)                                      --------->RAP2.3(1)                                      --------->ERF1                                      --------->ORA47(2)                                      <------NtERF2                                      --------->ATERF1(1)                                      --------->RRTF1(1)                                     --------->ABI4(1)                                     <---------DREB2C(1)                                     ------>NtERF2                                     <---------DEAR4(2)                                     <---------RAP2.3(1)                                     --------->At4g35610                                     <---------ATERF1(1)                                     <---------At4g35610                                    --------->RRTF1(3)                                    --------->RAP2.3(3)                                    --------->RRTF1(2)                                    <---------DEAR3(1)                                    --------->DEAR3(1)                                    <---------ATERF1(2)                                    --------->ATERF1(2)                                    --------->RAP2.3(2)                                    <---------ALFIN1                                   --------->ATERF1(1)                                   --------->ERF1                                   --------->RRTF1(1)                                   --------->ORA47(2)                                   <------NtERF2                                   --------->RAP2.6(1)                                   --------->DEAR4(2)                                   --------->RAP2.3(1)                                   --------->DEAR3(2)                                  <---------RAP2.3(1)                                  <---------RRTF1(1)                                  ------>NtERF2                                  <---------ATERF1(1)                              <---------MYB52(1)                 <---------YAB1  <---------ANAC58                 --------->ICU4  <---------ANAC58               <-----------HVH21    --------->ANAC58         <-------GAMYB                      --------->LBD16    --------->ANAC58        <---------ANAC58         <---------ALFIN1                           <----  --------->MYB52(1)        <---------ANAC58      <-----------GT1                        <-----------GT1 -------->DEAR3(2)--------->YAB1 <---------RAP2.3(2)--------->MYB46(3)                  <<<<<<<<<<GT-3b   agaccgacggaagagcgtcatcataagtttccgttgcgccgccgccataacttcaccaccttcttccgtcaaaaccattctacttgctatttttcttcct  2103500                 ----------->HVH21           <---------ANAC58      <--------ATHB1             <----------DOF2      --------->ATHB12           <---------DAG2                                                 -----      -------->HAHB4            <---------DAG2                                           <-------TEIL      <---------ICU4          ---------->ID1                          <------MYB46(1)  <-------PIF5     <---------YAB1         --------->WRKY38(1)            <---------AHL20(2)          ------->PIF5     <---------ATHB12       --------->WRKY12              <---------AHL20(2)          <---------ZAT2-     --------->ICU4       <----------DOF2 <---------MYB52(1)          <------MYB83    <---------At4g35610    <---------TOE2(3)     --------------------->WRI1  ------>ZmHOX2a(1)  >>>>>>>>>GT-1--------->At4g35610  <---------AHL20(2)<---------bZIP60(2)---------->ID1 <----------DOF2 ----------->GT1 --------->ZAT2- ------DOF2<---------ANAC58 ----------->HVH21    <-----------GT1     --------->MYB59<-----------RAV1(2)   ttgtttaatgattccttgtctgacctgtctttgacctttttgtcgtttttttaatccttttttaatgacagtaggtaaatctcttgccaggtgcgatgaa  2103600                                                                    <---------AHL20(2)                                                                    --------->AHL20(2)                    <-----------GT1                                --------->AHL20(2)                --------->DAG2                                --------->AHL20(2)               ---------->DOF2                                <---------AHL20(2)          ------------>CBF                                   --------->YAB1      <------------CBF                                       --------->AHL20(2)                     < <---------------AGL15           <---------ALFIN1        --------->AHL20(2)                         < --------------->AGL15       <-----------GT1             --------->ICU4                             - -->TEIL----------->GT1     <-----------GT1              <---------AHL20(2)                       --- ---------------->AGL1  <----------DOF2             --------->ANAC55(2)                          ---- ---------------->AGL3 <---------DAG2      <---------AHL20(2)<---------AHL20(2)                 -----   tttccaaatattgtcaataaagttacctttttatcccaccttgattttttttttatgtattaattaaaatttaaaaacgtataccattagcaaatagtag  2103700          <------------CBF  <------------CBF <--------ATHB1 <---------ICU4 --------->YAB1                                                                              -------- -------->ATHB1                                         <----------DOF2                      -------- --------->ATHB51                        <---------WRKY12                     --------->ANAC58 --------->ATHB12                        <---------WRKY38(1)   <-------TEIL   --------->ANAC46 ---------ATHB12                      <------MYB46(1)<---------ARR11(1)       --------->ANAC58 ---------YAB1                        <------MYB83   --------->ARR14(2)     <---------ALFIN1 -------- -------->ICU4                 ------------>CBF      ------->TEIL<----------DOF2      ---------->DOF2 ------>WOX13(1)          <---------ARR14(2)         <---------ARR14(2)    <------NtERF2     -------- -------->ATHB5           --------->ARR14(2)        <---------CCA1(2)     <------NtERF2      <------- ------->CBF      --------->YAB1     --------->MYB59<---------ARR14(1)   --------->PCF2 --------->ANAC46   caatcattggtatattggaatcatatagtatatggcaatttggtcatcgatatcgtatctttatgtgcattttggcccccacgatactaaaagtcacgaa  2103800                                                                                 <---------ICU4                                                                      <---------ANAC46                                                                    <-----------GT1                                                                 <---------ICU4 <---------YAB1                            <-----------RAV1(1)             <---------YAB1      --------->ICU4                  --------->ATHB12<---------YAB1          ----------->GT1     <---------ICU4 ->ANAC58        <---------YAB1   --------->ICU4    --------->HSFB2a(2)       --------->YAB1 ->ANAC55(2)   --------------->AGL15          --------->ATHB12  --------->AHL20(2) ->ANAC46      <----------DOF2  <---------At4g35610 <---------HSFB2a(2)      --------->ICU4 ->ANAC58      <---------------AGL15       --------->At4g35610  <---------AHL20(2) <---------YAB1 --ANAC55(2)  <-----------------AGL3       <---------At4g35610 <---------WOX13(1)--------->YAB1   attttccaaagtatcgacttttattggaaaatggtgctgattatcaactgatttgtagaagtgtgattaattacctgtagtcattatgattttcttgaac  2103900                                                ----------->GT1                                           <---------ANAC55(2)                                      --------->YAB1                                      <--------HAHB4                                      <---------ICU4                     <---------AHL20(2)                                     <---------YAB1                      <---------AHL20(1)                                    <---------ARR11(1)                   --------->AHL20(1)                                 <---------ANAC58                --------->ZAT2 <---------------AGL15                                 <---------ANAC46----------->GT1 <---------At4g35610                     ------->TEIL<---------ANAC58<----------ID1  <---------ZAT2 --------------->AGL15                 <---------ARR11(3)<---------CCA1(2)    ---------->DOF2  --------->AHL20(2) ---------->DOF2 <---------------AtSPL3    <---------YAB1        --------->At4g35610      ---------->DOF2   aaaaaaagaagaaacagaagatgtatgtcactatgtcgtatcattacgagagggaaaaaaaagaaacagctggaataaattactcaaataagaaaagaaa  2104000  Previous    Next  AGI:  At1g06840.1    Description:  leucine-rich repeat transmembrane protein kinase, putative. similar to ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT5G01950.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT5G37450.1); similar to leucine-rich repeat transmembrane protein kinase, putative [Arabidopsis thaliana] (TAIR:AT3G53590.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45378.1); similar to hypothetical protein OsJ_004736 [Oryza sativa (japonica cultivar-group)] (GB:EAZ14911.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21294.1); contains InterPro Range:  from: 2097746    to: 2103478    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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