Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    <----------DOF2                                                                  <---------DAG2                                         <---------WRKY12       ------>MYB83                             --------->ARR14(2)                 ------>MYB46(1)                             --------->KAN4(2)            --------->WRKY12                             <---------ARR14(2)           --------->WRKY38(1)                     <---------ICU4      <---------WRKY45<---------WOX13(1)                  --------->YAB1         <---------WRKY38(1)   <---------ALFIN1               ----------->GT1   <----------DOF2       --------->ATHB12  <------ZmHOX2a(1) --------->ICU4      --------->WRKY18(1)<---------WRKY18(1)          <------ZmHOX2a(1)   agaaggagagattgaagcagtcaaaattgcatattctttttggtcaacaaaaactattcattgacccacttttcaattgtatcgattataggacgagacg  2081500                                                                                   ---------->DOF2                                                                                   ==================                                                                              =======================                                                                              ----------->GT1                         <---------------AGL15                                <-------GAMYB                         --------------->AGL15                               <------MYB83                     --------->YAB1                                          <------MYB46(1)        -                  --------->YAB1                                         <------MYB46(1)           --                 <---------AHL20(2)                                      <------MYB83              <-                <---------AHL20(1)                     --------->At4g35610  <---------MYB46(3)  <----                --------->AHL20(2)                     <------NtERF2    --------->MYB55(2)<---------ARR14(2)                <---------AHL20(2)                     <---------At4g35610 <---------ANAC46--------->At4g35610                --------->AHL20(1)                 <-----------HVH21    <---------MYB46(3)--------->ARR14(2)             --------->AHL20(2)           ---------->DOF2               <---------AtMYB61<------ZmHOX2a(1)             --------->YAB1    <---------------------WRI1  <---------ARR14(2)----------->GT1 --------   aagaagacagagctataatataatcatccaaattgagaagaaatcaaagccaatgtcagcgaatttcgaaacatttggtgggttaaaaagaggaactgac  2081600                                      --------->ARR14(2)                                      --------->ARR11(3)                                      <---------ARR14(2)                               <---------LBD16                              --------->MYB52(1)                             <------NtERF2                             ----------->HVH21                             --------->ATERF1(1)                            <-----------HVH21                            <-----------TGA1                           <---------TGA2(1)                           --------->bZIP60(1)                           <---------bZIP60(1)       <------NtERF2       --------->TGA2(1)  --------->ALFIN1         <---------ANAC58 =====bZIP_DOF             <---------ANAC46               --------->At4g35610 =====MYC_MYB              <---------ANAC58         ---------->DOF2                              <--- -------->ALFIN1          <------NtERF2           --------->ARR14(2)                             ---- ----->MYC3             <---------DEAR3(1)        <---------ARR14(2)                            <---- ------MYC3           <---------MYB46(3)  <-----------RAV1(1)                              --------->TOE2(3) -----TGA1a          --------->ALFIN1<------ZmHOX2a(1) <---------At4g35610                 --------->TOE1(3) --->HVH21           <---------AtMYB61<---------ARR11(3)  <---------At4g35610      ------>ZmHOX2a(1)   atgtgtggaggcactcggagatagtggtggcgtcacggaggatattgtcgcagatagagcagcttaagcatgccctcatcgtctccttcttcaccttaat  2081700                                                                     --------->MYB52(1)    <---------                                                             --------->ALFIN1             <---------ANAC58                                                            ------->MYC2                  <---------ANAC58                                       <-------MYC2         ------->MYC3               <---------MYB52(1)          <----------DOF2              ------->MYC2         <-------MYC2             <---------ANAC58    <----------DOF2              --------->YAB1  --------->ANAC46--------->ANAC58    <---------ANAC58 ------ICU4                 <---------ATHB12    --------->LBD16  --------->ANAC58    <---------ANAC46 ----->YAB1       <---------MYB52(1)   ------->MYC3         <-------MYC3          --------->ALFIN1 -----ATHB12    <-----------RAV1(1)    <-------MYC3 --------->ARR14(2)           <---------HSFC1(2) <   catcatctttctctttatctgttgggcttaatcactcacaacgtgctatccccaaaactgcatgtggacgaaaacggcgaagaagtgtcgtttctttcgc  2081800                                                             <---------TOE1(2)                                                             <---------TOE2(2)                                                             --------->SPL7                                                           --------->TOE1(2)                    -----                                                           <---------SPL7                       <----            ------>ZmHOX2a(2)                             <---------ANAC46             <------NtERF2           <---------At4g35610                            <---------ANAC58           <---------DEAR3(1)           --------->At4g35610                           --------------->AtSPL3     --------->ATERF1(1)    <---------ANAC46                                     <---------------AtSPL3     <------NtERF2  <---------MYB46(3)              <---------ANAC58       <---------------AtSPL8    <---------RAP2.6(3)  <---------DEAR3(1)              <---------ANAC58       <---------TOE2(3)       --------->ATERF1(1) -DOF2    <---------ARR11(3) <-----------RAV1(1) >>>>>>>>>TBF1  <---------ARR14(2) <---------ATERF1(1) -----------HVH21      <---------TOE2(3) --------->CCA1(2)<---------ANAC58    --------->ALFIN1 ------   tcggtcgctggtgatctgaagaataaatgttatggtgcgagagagatggaagaagaattgacgtacgattcggacaagaagtggccgtcgtcgtctatta  2081900                                   <------------CBF                                 --------->AHL20(1)         --------->ANAC58        <---------AHL20(2)       --------->CCA1(2)         <---------AHL20(1) --------->AHL20(2)          <---------AHL20(2)               <----------DOF2                   ----- ---->AHL20(2)   <-----------HVH21--------->ATHB12          <---------YAB1                      ----- -----AHL20(2)<---------O2*TSS   --------->AHL20(2)   <----------DOF2                      --------->ETT(2) --->YAB1--------->ANAC58<----------DOF2        <---------GLK1(1)                          <---------ETT(2)   aaatttaagagacgcgatgtgtcacttctttttattttattggaacaagggtttctctttttatctttgtgttctgtcttaagagctctctcgtcgacaa  2082000                                                  <---------AHL20(2)                                                  --------->AHL20(2)                                                <---------------AGL15                                                --------------->AGL15                                                --------->TOE2(3)                                                <----------DOF2                                               <-----------------AGL3                                               ======================================================                                               ----------------->AGL3                                          <---------ZAT6           --------->WRKY18(1)     <---------           ---------->DOF2            <----------DOF2             <-----------HVH21  ----------->GT1<       --------->ZAT18             --------->ARR11(3)             <--------ZAP1     <---------TOE2(3) ---->ANAC58                       --------->GLK1(2)     <------ZmHOX2a(1)   <----------DOF2      --- ---->ANAC58                       <---------ARR11(3)  --------->MYB59 <---------ATHB12    <---------   gaaaacgagcgctcaaagacgtttttttttgggtcaaaatctttgtgttactttaattaggaaaactaggtcaaacattctttattttggttaatctaat  2082100                                                                                                    -                                                                                         --------->ARR11(3)                                                                                         --------->AHL20(1) ---------->DOF2                  ----------->RAV1(1)       <---------ANAC58             <---------AHL20(2) ======MADS_MADS                 --------->ANAC58           <---------ANAC58       --------->YAB1 --- ------AGL15                     --------->ANAC46     <---------DAG2      --------->MYB52(2)     ---- ------ZmHOX2a(1)        --------->DAG2       <----------DOF2           <---------YAB1   <---------AHL20(1) ------>MYB59           ---------->DOF2--------->AHL20(2)   <---------ANAC46 <-----------GT1    ----- --------AG  ----------->GT1     --------->ANAC58     <----------DOF2 ----------->GT1------>ZmHOX2a(1)   taggaaagaagagttttgtaaaaaaaaaaagttgaacgacataaatttcttttcaactttttgggtgagaaattgttatttgctatcctaatattttgaa  2082200                                                                          <---------ANAC58                                                                          <---------ANAC46                                                                       <---------GLK1(1)                                                                 -------->HAHB4                                               --------->ATHB12  <---------ICU4                                --------->At4g35610              --------->YAB1                                <---------At4g35610             <---------ATHB51             ------->TEIL     -------->HAHB4      <---------AHL20(2)   --------->ICU4    --------->ICU4          --------->WOX13(1)     --------->YAB1      --------->AHL20(2) <---------ICU4      <---------YAB1        <---------ATHB12 -------->AHL20(2)      --------->YAB1 --------->At5g28300     <---------AHL20(2)   --------->YAB1 -------->GT1          <---------YAB1 ----------->GT1         --------->YAB1        --------->WOX13(1) ----->DAG2--------->ZAT14 --------->YAB1   --------->YAB1   <---------YAB1      --------->TOE2(3)  < ----->DOF2<---------ZAT18<---------YAB1   --------->ICU4  --------->YAB1 <---------ANAC58<---------ATHB12   aagtaaatgatggtgaactcttcatattataatcagatgatggtaaaaatgatttgtataactataataatggatttcgtttacattaatcaatgaatat  2082300              ------->GAMYB             --------->MYB46(3)           --------->MYB52(1)  --------->KAN4(2)  --------->TOE1(2)                                 <---------TOE1(1) <---------KAN4(1)                                  <---------TOE2(1) --------->HSFB2a(1)                               --------->SPL7 <---------HSFC1(2)                             <---------ANAC58                                    < --------->HSFC1(2)           <-------TEIL      <---------ANAC58                         <---------ANAC58 --------->KAN4(1) ------>MYB46(1)             <---------------AtSPL8                    <---------ANAC46 <---------HSFB2a(1)    <-----------GT1        <---------------AtSPL3              ---------->DOF2  < ---------KAN4(2)  ------>MYB83 <-----------HVH21<---------SPL7    --------->CCA1(2)     <---------ANAC58   ggaacattcgaatcaacgaccaaatgtaacgattcgtcattcgtataatggggtacgagataacatcagataagaggttttgttccaaagggcctgtaga  2082400  Previous    Next  AGI:  At1g06770.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT2G30580.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO22649.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 2078910    to: 2081926    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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